RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 PLA2R1Q13018 1463 aa34.19■■■■□ 3.06
HDGF-201ENST00000357325 PLEKHH2Q8IVE3 1493 aa34.19■■■■□ 3.06
HDGF-201ENST00000357325 MYO5CQ9NQX4 1742 aa34.15■■■■□ 3.06
HDGF-201ENST00000357325 ROCK2O75116 1388 aaKnown RBP34.14■■■■□ 3.06
HDGF-201ENST00000357325 CCDC144AA2RUR9 1427 aa34.14■■■■□ 3.06
HDGF-201ENST00000357325 MAST1Q9Y2H9 1570 aa34.14■■■■□ 3.06
HDGF-201ENST00000357325 NBPF1Q3BBV0 1214 aa34.13■■■■□ 3.05
HDGF-201ENST00000357325 ARID4BQ4LE39 1312 aaPredicted RBP34.13■■■■□ 3.05
HDGF-201ENST00000357325 UNC13BO14795 1591 aa34.11■■■■□ 3.05
HDGF-201ENST00000357325 PRAG1Q86YV5 1406 aa34.08■■■■□ 3.05
HDGF-201ENST00000357325 ZCCHC11Q5TAX3 1644 aaKnown RBP34.07■■■■□ 3.04
HDGF-201ENST00000357325 RBM19Q9Y4C8 960 aaKnown RBP34.04■■■■□ 3.04
HDGF-201ENST00000357325 A2MP01023 1474 aa34.04■■■■□ 3.04
HDGF-201ENST00000357325 PLXNC1O60486 1568 aa34.04■■■■□ 3.04
HDGF-201ENST00000357325 PLCH2O75038 1416 aa34.03■■■■□ 3.04
HDGF-201ENST00000357325 TRPM1Q7Z4N2 1603 aa34.03■■■■□ 3.04
HDGF-201ENST00000357325 TRAPPC8Q9Y2L5 1435 aa34.01■■■■□ 3.04
HDGF-201ENST00000357325 CLASP1Q7Z460 1538 aa34■■■■□ 3.03
HDGF-201ENST00000357325 IQGAP3Q86VI3 1631 aa34■■■■□ 3.03
HDGF-201ENST00000357325 PNISRQ8TF01 805 aaKnown RBP33.99■■■■□ 3.03
HDGF-201ENST00000357325 EFCAB2Q5VUJ9 269 aa33.97■■■■□ 3.03
HDGF-201ENST00000357325 DUOX2Q9NRD8 1548 aa33.97■■■■□ 3.03
HDGF-201ENST00000357325 TMC1Q8TDI8 760 aa33.95■■■■□ 3.03
HDGF-201ENST00000357325 AFAP1Q8N556 730 aa33.93■■■■□ 3.02
HDGF-201ENST00000357325 ABCC1P33527 1531 aa33.91■■■■□ 3.02
HDGF-201ENST00000357325 E9PCH4 1651 aa33.91■■■■□ 3.02
HDGF-201ENST00000357325 MAGI2Q86UL8 1455 aa33.9■■■■□ 3.02
HDGF-201ENST00000357325 ERBINQ96RT1 1412 aa33.89■■■■□ 3.02
HDGF-201ENST00000357325 PPP4R2Q9NY27 417 aa33.89■■■■□ 3.02
HDGF-201ENST00000357325 UHRF1BP1LA0JNW5 1464 aa33.89■■■■□ 3.02
HDGF-201ENST00000357325 B4GALNT3Q6L9W6 998 aa33.88■■■■□ 3.01
HDGF-201ENST00000357325 GPRASP1Q5JY77 1395 aa33.86■■■■□ 3.01
HDGF-201ENST00000357325 DISP3Q9P2K9 1392 aa33.86■■■■□ 3.01
HDGF-201ENST00000357325 SMG6Q86US8 1419 aaKnown RBP33.85■■■■□ 3.01
HDGF-201ENST00000357325 TESK2Q96S53 571 aa33.85■■■■□ 3.01
HDGF-201ENST00000357325 MYBBP1AQ9BQG0 1328 aaKnown RBP33.84■■■■□ 3.01
HDGF-201ENST00000357325 ERICH6BQ5W0A0 696 aa33.82■■■■□ 3
HDGF-201ENST00000357325 SPAG9O60271 1321 aaKnown RBP33.81■■■■□ 3
HDGF-201ENST00000357325 NUDCQ9Y266 331 aa33.81■■■■□ 3
HDGF-201ENST00000357325 ATP10AO60312 1499 aa33.81■■■■□ 3
HDGF-201ENST00000357325 PER1O15534 1290 aaPredicted RBP33.8■■■■□ 3
HDGF-201ENST00000357325 PRDM15P57071 1507 aaPredicted RBP33.8■■■■□ 3
HDGF-201ENST00000357325 RALBP1Q15311 655 aa33.79■■■■□ 3
HDGF-201ENST00000357325 LRPPRCP42704 1394 aaKnown RBP33.78■■■■□ 3
HDGF-201ENST00000357325 BRD4O60885 1362 aaPredicted RBP33.77■■■■□ 3
HDGF-201ENST00000357325 COL17A1Q9UMD9 1497 aaPredicted RBP33.76■■■□□ 2.99
HDGF-201ENST00000357325 ZFYVE16Q7Z3T8 1539 aa33.72■■■□□ 2.99
HDGF-201ENST00000357325 PARD3Q8TEW0 1356 aa33.72■■■□□ 2.99
HDGF-201ENST00000357325 CC2D1BQ5T0F9 858 aaKnown RBP33.72■■■□□ 2.99
HDGF-201ENST00000357325 SALL2Q9Y467 1007 aaPredicted RBP33.71■■■□□ 2.99
HDGF-201ENST00000357325 LAMC1P11047 1609 aa33.7■■■□□ 2.98
HDGF-201ENST00000357325 KTN1Q86UP2 1357 aaKnown RBP33.7■■■□□ 2.98
HDGF-201ENST00000357325 PANK3Q9H999 370 aa33.69■■■□□ 2.98
HDGF-201ENST00000357325 EIF2AK4Q9P2K8 1649 aaKnown RBP33.67■■■□□ 2.98
HDGF-201ENST00000357325 MYT1Q01538 1121 aa33.66■■■□□ 2.98
HDGF-201ENST00000357325 NLRP13Q86W25 1043 aa33.65■■■□□ 2.98
HDGF-201ENST00000357325 WDR7Q9Y4E6 1490 aa33.65■■■□□ 2.98
HDGF-201ENST00000357325 RNF123Q5XPI4 1314 aa33.65■■■□□ 2.98
HDGF-201ENST00000357325 ANP32EQ9BTT0 268 aa33.64■■■□□ 2.98
HDGF-201ENST00000357325 RTEL1-TNFRSF6BF6WH68 1400 aa33.64■■■□□ 2.98
HDGF-201ENST00000357325 FANCAO15360 1455 aa33.62■■■□□ 2.97
HDGF-201ENST00000357325 TMF1P82094 1093 aa33.61■■■□□ 2.97
HDGF-201ENST00000357325 MYT1LQ9UL68 1186 aa33.61■■■□□ 2.97
HDGF-201ENST00000357325 RNF17Q9BXT8 1623 aaKnown RBP33.61■■■□□ 2.97
HDGF-201ENST00000357325 MSH5O43196 834 aa33.59■■■□□ 2.97
HDGF-201ENST00000357325 MADDQ8WXG6 1647 aa33.59■■■□□ 2.97
HDGF-201ENST00000357325 CLTCL1P53675 1640 aa33.58■■■□□ 2.97
HDGF-201ENST00000357325 ARAP3Q8WWN8 1544 aa33.58■■■□□ 2.97
HDGF-201ENST00000357325 SCAPERQ9BY12 1400 aa33.58■■■□□ 2.97
HDGF-201ENST00000357325 KIF3BO15066 747 aa33.58■■■□□ 2.97
HDGF-201ENST00000357325 TRPM2O94759 1503 aa33.57■■■□□ 2.97
HDGF-201ENST00000357325 ATP7AQ04656 1500 aa33.56■■■□□ 2.96
HDGF-201ENST00000357325 ABCA9Q8IUA7 1624 aa33.55■■■□□ 2.96
HDGF-201ENST00000357325 PTPRTO14522 1441 aa33.55■■■□□ 2.96
HDGF-201ENST00000357325 SPHKAPQ2M3C7 1700 aa33.55■■■□□ 2.96
HDGF-201ENST00000357325 DEPDC5O75140 1603 aa33.54■■■□□ 2.96
HDGF-201ENST00000357325 INO80Q9ULG1 1556 aaPredicted RBP33.52■■■□□ 2.96
HDGF-201ENST00000357325 ADGRL1O94910 1474 aa33.51■■■□□ 2.95
HDGF-201ENST00000357325 CEP152O94986 1710 aa33.5■■■□□ 2.95
HDGF-201ENST00000357325 UGGT1Q9NYU2 1555 aa33.49■■■□□ 2.95
HDGF-201ENST00000357325 CDCA7LQ96GN5 454 aa33.48■■■□□ 2.95
HDGF-201ENST00000357325 ASXL2Q76L83 1435 aa33.47■■■□□ 2.95
HDGF-201ENST00000357325 TET3O43151 1660 aa33.47■■■□□ 2.95
HDGF-201ENST00000357325 IQGAP1P46940 1657 aa33.47■■■□□ 2.95
HDGF-201ENST00000357325 WASHC2CQ9Y4E1 1318 aa33.45■■■□□ 2.95
HDGF-201ENST00000357325 VWDEQ8N2E2 1590 aa33.44■■■□□ 2.94
HDGF-201ENST00000357325 CCDC136Q96JN2 1154 aa33.43■■■□□ 2.94
HDGF-201ENST00000357325 MROH1Q8NDA8 1641 aa33.42■■■□□ 2.94
HDGF-201ENST00000357325 KANK1Q14678 1352 aa33.42■■■□□ 2.94
HDGF-201ENST00000357325 SCAF11Q99590 1463 aaKnown RBP33.39■■■□□ 2.94
HDGF-201ENST00000357325 FANCIQ9NVI1 1328 aa33.39■■■□□ 2.94
HDGF-201ENST00000357325 CFAP70Q5T0N1 1121 aa33.38■■■□□ 2.93
HDGF-201ENST00000357325 RRP1P56182 461 aaKnown RBP33.37■■■□□ 2.93
HDGF-201ENST00000357325 RCAN3Q9UKA8 241 aa33.36■■■□□ 2.93
HDGF-201ENST00000357325 ADGRF5Q8IZF2 1346 aa33.36■■■□□ 2.93
HDGF-201ENST00000357325 AMER1Q5JTC6 1135 aaPredicted RBP33.33■■■□□ 2.93
HDGF-201ENST00000357325 KNSTRNQ9Y448 316 aa33.33■■■□□ 2.93
HDGF-201ENST00000357325 BLMP54132 1417 aaPredicted RBP33.33■■■□□ 2.93
HDGF-201ENST00000357325 KIDINS220Q9ULH0 1771 aa33.33■■■□□ 2.93
HDGF-201ENST00000357325 EXOC6Q8TAG9 804 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms