RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MAGI2Q86UL8 1455 aa26.64■■□□□ 1.85
SMARCD3-202ENST00000356800 YEATS2Q9ULM3 1422 aa26.63■■□□□ 1.85
SMARCD3-202ENST00000356800 DEPDC5O75140 1603 aa26.62■■□□□ 1.85
SMARCD3-202ENST00000356800 SLC4A1APQ9BWU0 796 aaKnown RBP26.6■■□□□ 1.85
SMARCD3-202ENST00000356800 IQGAP3Q86VI3 1631 aa26.59■■□□□ 1.85
SMARCD3-202ENST00000356800 FAM135AQ9P2D6 1515 aa26.58■■□□□ 1.85
SMARCD3-202ENST00000356800 BCORL1Q5H9F3 1711 aa26.56■■□□□ 1.84
SMARCD3-202ENST00000356800 MROH1Q8NDA8 1641 aa26.56■■□□□ 1.84
SMARCD3-202ENST00000356800 FOXD1Q16676 465 aa26.55■■□□□ 1.84
SMARCD3-202ENST00000356800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMARCD3-202ENST00000356800 RNF17Q9BXT8 1623 aaKnown RBP26.54■■□□□ 1.84
SMARCD3-202ENST00000356800 KIF3BO15066 747 aa26.54■■□□□ 1.84
SMARCD3-202ENST00000356800 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
SMARCD3-202ENST00000356800 PRDM15P57071 1507 aaPredicted RBP26.51■■□□□ 1.83
SMARCD3-202ENST00000356800 VWDEQ8N2E2 1590 aa26.51■■□□□ 1.83
SMARCD3-202ENST00000356800 PKD2Q13563 968 aa26.5■■□□□ 1.83
SMARCD3-202ENST00000356800 ATP10AO60312 1499 aa26.49■■□□□ 1.83
SMARCD3-202ENST00000356800 ANKRD30BQ9BXX2 1392 aa26.49■■□□□ 1.83
SMARCD3-202ENST00000356800 ARHGEF40Q8TER5 1519 aa26.49■■□□□ 1.83
SMARCD3-202ENST00000356800 REREQ9P2R6 1566 aa26.47■■□□□ 1.83
SMARCD3-202ENST00000356800 NEUROD1Q13562 356 aa26.45■■□□□ 1.82
SMARCD3-202ENST00000356800 SIGLEC1Q9BZZ2 1709 aa26.44■■□□□ 1.82
SMARCD3-202ENST00000356800 TET3O43151 1660 aa26.42■■□□□ 1.82
SMARCD3-202ENST00000356800 KANK1Q14678 1352 aa26.41■■□□□ 1.82
SMARCD3-202ENST00000356800 CEP152O94986 1710 aa26.4■■□□□ 1.82
SMARCD3-202ENST00000356800 E9PCH4 1651 aa26.4■■□□□ 1.82
SMARCD3-202ENST00000356800 AGLP35573 1532 aa26.39■■□□□ 1.81
SMARCD3-202ENST00000356800 GGT6Q6P531 493 aa26.37■■□□□ 1.81
SMARCD3-202ENST00000356800 LMTK2Q8IWU2 1503 aa26.37■■□□□ 1.81
SMARCD3-202ENST00000356800 RPRD2Q5VT52 1461 aaKnown RBP26.35■■□□□ 1.81
SMARCD3-202ENST00000356800 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
SMARCD3-202ENST00000356800 ABCC3O15438 1527 aa26.33■■□□□ 1.81
SMARCD3-202ENST00000356800 EFCAB6Q5THR3 1501 aa26.33■■□□□ 1.81
SMARCD3-202ENST00000356800 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
SMARCD3-202ENST00000356800 ZC3H13Q5T200 1668 aaKnown RBP26.29■■□□□ 1.8
SMARCD3-202ENST00000356800 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
SMARCD3-202ENST00000356800 SPHKAPQ2M3C7 1700 aa26.27■■□□□ 1.8
SMARCD3-202ENST00000356800 CAMSAP1Q5T5Y3 1602 aa26.27■■□□□ 1.8
SMARCD3-202ENST00000356800 WASHC2CQ9Y4E1 1318 aa26.26■■□□□ 1.79
SMARCD3-202ENST00000356800 PTPRTO14522 1441 aa26.24■■□□□ 1.79
SMARCD3-202ENST00000356800 TRPM2O94759 1503 aa26.22■■□□□ 1.79
SMARCD3-202ENST00000356800 NPATQ14207 1427 aa26.21■■□□□ 1.79
SMARCD3-202ENST00000356800 CFAP65Q6ZU64 1925 aaKnown RBP26.21■■□□□ 1.79
SMARCD3-202ENST00000356800 CCDC144AA2RUR9 1427 aa26.2■■□□□ 1.78
SMARCD3-202ENST00000356800 PPP1R15AO75807 674 aaPredicted RBP26.19■■□□□ 1.78
SMARCD3-202ENST00000356800 L3MBTL2Q969R5 705 aa26.18■■□□□ 1.78
SMARCD3-202ENST00000356800 CLTCQ00610 1675 aaKnown RBP26.17■■□□□ 1.78
SMARCD3-202ENST00000356800 CLTCL1P53675 1640 aa26.17■■□□□ 1.78
SMARCD3-202ENST00000356800 PPP6R1Q9UPN7 881 aa26.16■■□□□ 1.78
SMARCD3-202ENST00000356800 ARHGAP31Q2M1Z3 1444 aa26.16■■□□□ 1.78
SMARCD3-202ENST00000356800 MLECQ14165 292 aa26.15■■□□□ 1.78
SMARCD3-202ENST00000356800 ARID4BQ4LE39 1312 aaPredicted RBP26.13■■□□□ 1.77
SMARCD3-202ENST00000356800 UGGT1Q9NYU2 1555 aa26.11■■□□□ 1.77
SMARCD3-202ENST00000356800 NOS1P29475 1434 aa26.09■■□□□ 1.77
SMARCD3-202ENST00000356800 PREX1Q8TCU6 1659 aa26.09■■□□□ 1.77
SMARCD3-202ENST00000356800 SYNMO15061 1565 aa26.07■■□□□ 1.76
SMARCD3-202ENST00000356800 CNTLNQ9NXG0 1405 aa26.07■■□□□ 1.76
SMARCD3-202ENST00000356800 SPATA31E1Q6ZUB1 1445 aa26.06■■□□□ 1.76
SMARCD3-202ENST00000356800 KIF1BO60333 1816 aa26.04■■□□□ 1.76
SMARCD3-202ENST00000356800 PIK3C2BO00750 1634 aa26.03■■□□□ 1.76
SMARCD3-202ENST00000356800 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
SMARCD3-202ENST00000356800 ERVK-7P63135 1459 aa26■■□□□ 1.75
SMARCD3-202ENST00000356800 RGL3Q3MIN7 710 aa26■■□□□ 1.75
SMARCD3-202ENST00000356800 MROH2AA6NES4 1674 aa26■■□□□ 1.75
SMARCD3-202ENST00000356800 NBPF8Q3BBV2 869 aa25.99■■□□□ 1.75
SMARCD3-202ENST00000356800 FBXO31Q5XUX0 539 aaPredicted RBP25.99■■□□□ 1.75
SMARCD3-202ENST00000356800 FER1L4A9Z1Z3 1794 aa25.98■■□□□ 1.75
SMARCD3-202ENST00000356800 ZMYM3Q14202 1370 aa25.97■■□□□ 1.75
SMARCD3-202ENST00000356800 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
SMARCD3-202ENST00000356800 SPATA31D1Q6ZQQ2 1576 aa25.97■■□□□ 1.75
SMARCD3-202ENST00000356800 ADGRB3O60242 1522 aa25.96■■□□□ 1.75
SMARCD3-202ENST00000356800 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
SMARCD3-202ENST00000356800 UHRF1BP1Q6BDS2 1440 aa25.95■■□□□ 1.74
SMARCD3-202ENST00000356800 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
SMARCD3-202ENST00000356800 IFT172Q9UG01 1749 aa25.9■■□□□ 1.74
SMARCD3-202ENST00000356800 IDI1Q13907 227 aa25.9■■□□□ 1.74
SMARCD3-202ENST00000356800 C3P01024 1663 aa25.89■■□□□ 1.74
SMARCD3-202ENST00000356800 ZNF316A6NFI3 1004 aaPredicted RBP25.89■■□□□ 1.73
SMARCD3-202ENST00000356800 SLC52A1Q9NWF4 448 aa25.89■■□□□ 1.73
SMARCD3-202ENST00000356800 MYO5BQ9ULV0 1848 aa25.89■■□□□ 1.73
SMARCD3-202ENST00000356800 ZNF326Q5BKZ1 582 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-202ENST00000356800 PRAG1Q86YV5 1406 aa25.87■■□□□ 1.73
SMARCD3-202ENST00000356800 MADDQ8WXG6 1647 aa25.87■■□□□ 1.73
SMARCD3-202ENST00000356800 ADAMTSL3P82987 1691 aa25.87■■□□□ 1.73
SMARCD3-202ENST00000356800 TMEM131LA2VDJ0 1609 aa25.86■■□□□ 1.73
SMARCD3-202ENST00000356800 CHGAP10645 457 aaKnown RBP25.84■■□□□ 1.73
SMARCD3-202ENST00000356800 PPLO60437 1756 aa25.84■■□□□ 1.73
SMARCD3-202ENST00000356800 RALGAPBQ86X10 1494 aa25.83■■□□□ 1.73
SMARCD3-202ENST00000356800 TRPM1Q7Z4N2 1603 aa25.83■■□□□ 1.73
SMARCD3-202ENST00000356800 RIMS1Q86UR5 1692 aaKnown RBP25.83■■□□□ 1.73
SMARCD3-202ENST00000356800 CEBPAP49715 358 aaPredicted RBP25.81■■□□□ 1.72
SMARCD3-202ENST00000356800 MYOM2P54296 1465 aa25.8■■□□□ 1.72
SMARCD3-202ENST00000356800 TNRQ92752 1358 aa25.8■■□□□ 1.72
SMARCD3-202ENST00000356800 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
SMARCD3-202ENST00000356800 NEXMIFQ5QGS0 1516 aa25.77■■□□□ 1.72
SMARCD3-202ENST00000356800 RPGRIP1LQ68CZ1 1315 aa25.75■■□□□ 1.71
SMARCD3-202ENST00000356800 NRXN1Q9ULB1 1477 aa25.75■■□□□ 1.71
SMARCD3-202ENST00000356800 A2ML1A8K2U0 1454 aa25.73■■□□□ 1.71
SMARCD3-202ENST00000356800 ADGRF5Q8IZF2 1346 aa25.73■■□□□ 1.71
SMARCD3-202ENST00000356800 HIRIP3Q9BW71 556 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms