RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 FAM135AQ9P2D6 1515 aa24.53■■□□□ 1.52
APP-203ENST00000354192 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
APP-203ENST00000354192 PANK3Q9H999 370 aa24.52■■□□□ 1.52
APP-203ENST00000354192 RBM19Q9Y4C8 960 aaKnown RBP24.51■■□□□ 1.51
APP-203ENST00000354192 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
APP-203ENST00000354192 NUTM2DQ5VT03 806 aaPredicted RBP24.5■■□□□ 1.51
APP-203ENST00000354192 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
APP-203ENST00000354192 SHANK2Q9UPX8 1470 aa24.48■■□□□ 1.51
APP-203ENST00000354192 ARHGEF12Q9NZN5 1544 aa24.48■■□□□ 1.51
APP-203ENST00000354192 CDC42BPBQ9Y5S2 1711 aa24.48■■□□□ 1.51
APP-203ENST00000354192 SCAPERQ9BY12 1400 aa24.47■■□□□ 1.51
APP-203ENST00000354192 BCORL1Q5H9F3 1711 aa24.46■■□□□ 1.51
APP-203ENST00000354192 CROCC2H7BZ55 1655 aa24.46■■□□□ 1.51
APP-203ENST00000354192 ABCC2Q92887 1545 aa24.45■■□□□ 1.5
APP-203ENST00000354192 PNISRQ8TF01 805 aaKnown RBP24.45■■□□□ 1.5
APP-203ENST00000354192 TMF1P82094 1093 aa24.44■■□□□ 1.5
APP-203ENST00000354192 PLCH2O75038 1416 aa24.41■■□□□ 1.5
APP-203ENST00000354192 PPP4R2Q9NY27 417 aa24.4■■□□□ 1.5
APP-203ENST00000354192 RALGAPBQ86X10 1494 aa24.4■■□□□ 1.5
APP-203ENST00000354192 DISP3Q9P2K9 1392 aa24.4■■□□□ 1.5
APP-203ENST00000354192 PLA2R1Q13018 1463 aa24.4■■□□□ 1.5
APP-203ENST00000354192 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.49
APP-203ENST00000354192 KTN1Q86UP2 1357 aaKnown RBP24.38■■□□□ 1.49
APP-203ENST00000354192 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
APP-203ENST00000354192 CCDC136Q96JN2 1154 aa24.37■■□□□ 1.49
APP-203ENST00000354192 PRAG1Q86YV5 1406 aa24.37■■□□□ 1.49
APP-203ENST00000354192 CFAP70Q5T0N1 1121 aa24.37■■□□□ 1.49
APP-203ENST00000354192 NUDCQ9Y266 331 aa24.36■■□□□ 1.49
APP-203ENST00000354192 TNNT2P45379 298 aaPredicted RBP24.36■■□□□ 1.49
APP-203ENST00000354192 KNSTRNQ9Y448 316 aa24.36■■□□□ 1.49
APP-203ENST00000354192 CDCA7LQ96GN5 454 aa24.35■■□□□ 1.49
APP-203ENST00000354192 A2MP01023 1474 aa24.34■■□□□ 1.49
APP-203ENST00000354192 RALBP1Q15311 655 aa24.34■■□□□ 1.49
APP-203ENST00000354192 OSCARQ8IYS5 282 aa24.34■■□□□ 1.49
APP-203ENST00000354192 ARHGEF5Q12774 1597 aa24.34■■□□□ 1.49
APP-203ENST00000354192 KDM5CP41229 1560 aa24.34■■□□□ 1.49
APP-203ENST00000354192 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
APP-203ENST00000354192 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.48
APP-203ENST00000354192 NLRP13Q86W25 1043 aa24.33■■□□□ 1.48
APP-203ENST00000354192 TESK2Q96S53 571 aa24.33■■□□□ 1.48
APP-203ENST00000354192 RAPGEF3O95398 923 aa24.32■■□□□ 1.48
APP-203ENST00000354192 KANK1Q14678 1352 aa24.3■■□□□ 1.48
APP-203ENST00000354192 ARID4BQ4LE39 1312 aaPredicted RBP24.3■■□□□ 1.48
APP-203ENST00000354192 FANCAO15360 1455 aa24.28■■□□□ 1.48
APP-203ENST00000354192 PLIN1O60240 522 aa24.28■■□□□ 1.48
APP-203ENST00000354192 TRAK1Q9UPV9 953 aa24.28■■□□□ 1.48
APP-203ENST00000354192 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
APP-203ENST00000354192 CYB5RLQ6IPT4 315 aa24.27■■□□□ 1.48
APP-203ENST00000354192 MYO5CQ9NQX4 1742 aa24.26■■□□□ 1.47
APP-203ENST00000354192 TMEM132EQ6IEE7 984 aa24.26■■□□□ 1.47
APP-203ENST00000354192 ERICH6Q7L0X2 663 aa24.25■■□□□ 1.47
APP-203ENST00000354192 CCDC146Q8IYE0 955 aa24.24■■□□□ 1.47
APP-203ENST00000354192 PER1O15534 1290 aaPredicted RBP24.24■■□□□ 1.47
APP-203ENST00000354192 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
APP-203ENST00000354192 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
APP-203ENST00000354192 WDR43Q15061 677 aaKnown RBP eCLIP24.24■■□□□ 1.47
APP-203ENST00000354192 DUOX2Q9NRD8 1548 aa24.23■■□□□ 1.47
APP-203ENST00000354192 ADGRL1O94910 1474 aa24.23■■□□□ 1.47
APP-203ENST00000354192 ASXL2Q76L83 1435 aa24.21■■□□□ 1.47
APP-203ENST00000354192 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
APP-203ENST00000354192 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.47
APP-203ENST00000354192 CFAP65Q6ZU64 1925 aaKnown RBP24.2■■□□□ 1.46
APP-203ENST00000354192 ADAMTS8Q9UP79 889 aa24.19■■□□□ 1.46
APP-203ENST00000354192 WDR7Q9Y4E6 1490 aa24.18■■□□□ 1.46
APP-203ENST00000354192 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
APP-203ENST00000354192 BRD4O60885 1362 aaPredicted RBP24.18■■□□□ 1.46
APP-203ENST00000354192 NEUROD2Q15784 382 aa24.17■■□□□ 1.46
APP-203ENST00000354192 RCAN3Q9UKA8 241 aa24.17■■□□□ 1.46
APP-203ENST00000354192 EXOC6Q8TAG9 804 aa24.17■■□□□ 1.46
APP-203ENST00000354192 STK26Q9P289 416 aa24.17■■□□□ 1.46
APP-203ENST00000354192 MLECQ14165 292 aa24.13■■□□□ 1.45
APP-203ENST00000354192 UGGT1Q9NYU2 1555 aa24.13■■□□□ 1.45
APP-203ENST00000354192 ABCC1P33527 1531 aa24.13■■□□□ 1.45
APP-203ENST00000354192 NPM2Q86SE8 214 aaKnown RBP24.12■■□□□ 1.45
APP-203ENST00000354192 SMG6Q86US8 1419 aaKnown RBP24.11■■□□□ 1.45
APP-203ENST00000354192 SKAP1Q86WV1 359 aa24.1■■□□□ 1.45
APP-203ENST00000354192 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
APP-203ENST00000354192 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
APP-203ENST00000354192 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
APP-203ENST00000354192 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
APP-203ENST00000354192 MAST1Q9Y2H9 1570 aa24.08■■□□□ 1.44
APP-203ENST00000354192 RRP1P56182 461 aaKnown RBP24.07■■□□□ 1.44
APP-203ENST00000354192 ANP32EQ9BTT0 268 aa24.07■■□□□ 1.44
APP-203ENST00000354192 CD109Q6YHK3 1445 aa24.07■■□□□ 1.44
APP-203ENST00000354192 ATP10AO60312 1499 aa24.06■■□□□ 1.44
APP-203ENST00000354192 PARD3Q8TEW0 1356 aa24.06■■□□□ 1.44
APP-203ENST00000354192 SLC12A5Q9H2X9 1139 aa24.05■■□□□ 1.44
APP-203ENST00000354192 STAG3Q9UJ98 1225 aa24.05■■□□□ 1.44
APP-203ENST00000354192 GPRASP1Q5JY77 1395 aa24.04■■□□□ 1.44
APP-203ENST00000354192 MSH5O43196 834 aa24.04■■□□□ 1.44
APP-203ENST00000354192 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
APP-203ENST00000354192 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
APP-203ENST00000354192 ERICH6BQ5W0A0 696 aa24.03■■□□□ 1.44
APP-203ENST00000354192 TRPM1Q7Z4N2 1603 aa24.03■■□□□ 1.44
APP-203ENST00000354192 UNC13BO14795 1591 aa24.03■■□□□ 1.44
APP-203ENST00000354192 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
APP-203ENST00000354192 APAF1O14727 1248 aa24.01■■□□□ 1.43
APP-203ENST00000354192 RRP7AQ9Y3A4 280 aaKnown RBP24.01■■□□□ 1.43
APP-203ENST00000354192 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
APP-203ENST00000354192 PLXNC1O60486 1568 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms