RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 POLR3GLQ9BT43 218 aa21.63■■□□□ 1.05
MBD1-205ENST00000353909 CARD11Q9BXL7 1154 aa21.63■■□□□ 1.05
MBD1-205ENST00000353909 IQGAP3Q86VI3 1631 aa21.63■■□□□ 1.05
MBD1-205ENST00000353909 ERBINQ96RT1 1412 aa21.62■■□□□ 1.05
MBD1-205ENST00000353909 KDM5CP41229 1560 aa21.62■■□□□ 1.05
MBD1-205ENST00000353909 FANCAO15360 1455 aa21.62■■□□□ 1.05
MBD1-205ENST00000353909 RALGAPBQ86X10 1494 aa21.62■■□□□ 1.05
MBD1-205ENST00000353909 POLR1AO95602 1720 aaPredicted RBP21.6■■□□□ 1.05
MBD1-205ENST00000353909 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
MBD1-205ENST00000353909 ARAP3Q8WWN8 1544 aa21.6■■□□□ 1.05
MBD1-205ENST00000353909 MAGI2Q86UL8 1455 aa21.59■■□□□ 1.05
MBD1-205ENST00000353909 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
MBD1-205ENST00000353909 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.05
MBD1-205ENST00000353909 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
MBD1-205ENST00000353909 CNGB1Q14028 1251 aaPredicted RBP21.57■■□□□ 1.04
MBD1-205ENST00000353909 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
MBD1-205ENST00000353909 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
MBD1-205ENST00000353909 NBPF1Q3BBV0 1214 aa21.55■■□□□ 1.04
MBD1-205ENST00000353909 MYT1LQ9UL68 1186 aa21.54■■□□□ 1.04
MBD1-205ENST00000353909 RTEL1-TNFRSF6BF6WH68 1400 aa21.54■■□□□ 1.04
MBD1-205ENST00000353909 ADGRL1O94910 1474 aa21.54■■□□□ 1.04
MBD1-205ENST00000353909 A2MP01023 1474 aa21.54■■□□□ 1.04
MBD1-205ENST00000353909 ROCK2O75116 1388 aaKnown RBP21.53■■□□□ 1.04
MBD1-205ENST00000353909 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
MBD1-205ENST00000353909 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
MBD1-205ENST00000353909 HNRNPUQ00839 825 aaKnown RBP eCLIP21.5■■□□□ 1.03
MBD1-205ENST00000353909 ATP7AQ04656 1500 aa21.5■■□□□ 1.03
MBD1-205ENST00000353909 DHX29Q7Z478 1369 aaKnown RBP21.49■■□□□ 1.03
MBD1-205ENST00000353909 ATP10AO60312 1499 aa21.48■■□□□ 1.03
MBD1-205ENST00000353909 INO80Q9ULG1 1556 aaPredicted RBP21.48■■□□□ 1.03
MBD1-205ENST00000353909 KIF3BO15066 747 aa21.48■■□□□ 1.03
MBD1-205ENST00000353909 E9PCH4 1651 aa21.48■■□□□ 1.03
MBD1-205ENST00000353909 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
MBD1-205ENST00000353909 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
MBD1-205ENST00000353909 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
MBD1-205ENST00000353909 DEPDC5O75140 1603 aa21.42■■□□□ 1.02
MBD1-205ENST00000353909 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
MBD1-205ENST00000353909 CD109Q6YHK3 1445 aa21.4■■□□□ 1.02
MBD1-205ENST00000353909 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.02
MBD1-205ENST00000353909 FKBP8Q14318 412 aa21.39■■□□□ 1.01
MBD1-205ENST00000353909 GPRASP1Q5JY77 1395 aa21.38■■□□□ 1.01
MBD1-205ENST00000353909 BCANQ96GW7 911 aa21.38■■□□□ 1.01
MBD1-205ENST00000353909 MROH1Q8NDA8 1641 aa21.36■■□□□ 1.01
MBD1-205ENST00000353909 PTPRTO14522 1441 aa21.35■■□□□ 1.01
MBD1-205ENST00000353909 TRPM2O94759 1503 aa21.35■■□□□ 1.01
MBD1-205ENST00000353909 VWDEQ8N2E2 1590 aa21.35■■□□□ 1.01
MBD1-205ENST00000353909 SPHKAPQ2M3C7 1700 aa21.35■■□□□ 1.01
MBD1-205ENST00000353909 CLTCL1P53675 1640 aa21.35■■□□□ 1.01
MBD1-205ENST00000353909 TET3O43151 1660 aa21.34■■□□□ 1.01
MBD1-205ENST00000353909 KANK1Q14678 1352 aa21.34■■□□□ 1.01
MBD1-205ENST00000353909 ZNF518AQ6AHZ1 1483 aa21.34■■□□□ 1.01
MBD1-205ENST00000353909 TESK2Q96S53 571 aa21.33■■□□□ 1.01
MBD1-205ENST00000353909 PRDM15P57071 1507 aaPredicted RBP21.32■■□□□ 1
MBD1-205ENST00000353909 UGGT1Q9NYU2 1555 aa21.32■■□□□ 1
MBD1-205ENST00000353909 DISP3Q9P2K9 1392 aa21.31■■□□□ 1
MBD1-205ENST00000353909 RAPGEF3O95398 923 aa21.3■■□□□ 1
MBD1-205ENST00000353909 POGZQ7Z3K3 1410 aa21.3■■□□□ 1
MBD1-205ENST00000353909 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
MBD1-205ENST00000353909 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
MBD1-205ENST00000353909 CEP152O94986 1710 aa21.29■■□□□ 1
MBD1-205ENST00000353909 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
MBD1-205ENST00000353909 MADDQ8WXG6 1647 aa21.27■■□□□ 1
MBD1-205ENST00000353909 LAMC1P11047 1609 aa21.27■■□□□ 1
MBD1-205ENST00000353909 GGT6Q6P531 493 aa21.26■□□□□ 0.99
MBD1-205ENST00000353909 FRMPD1Q5SYB0 1578 aa21.25■□□□□ 0.99
MBD1-205ENST00000353909 CFAP65Q6ZU64 1925 aaKnown RBP21.25■□□□□ 0.99
MBD1-205ENST00000353909 RNF17Q9BXT8 1623 aaKnown RBP21.24■□□□□ 0.99
MBD1-205ENST00000353909 COL17A1Q9UMD9 1497 aaPredicted RBP21.24■□□□□ 0.99
MBD1-205ENST00000353909 PPRC1Q5VV67 1664 aaKnown RBP21.24■□□□□ 0.99
MBD1-205ENST00000353909 EFCAB6Q5THR3 1501 aa21.23■□□□□ 0.99
MBD1-205ENST00000353909 NEFLP07196 543 aa21.23■□□□□ 0.99
MBD1-205ENST00000353909 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
MBD1-205ENST00000353909 PER1O15534 1290 aaPredicted RBP21.22■□□□□ 0.99
MBD1-205ENST00000353909 CFAP74Q9C0B2 1584 aa21.21■□□□□ 0.99
MBD1-205ENST00000353909 HECW2Q9P2P5 1572 aa21.2■□□□□ 0.98
MBD1-205ENST00000353909 IRX6P78412 446 aaPredicted RBP21.2■□□□□ 0.98
MBD1-205ENST00000353909 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
MBD1-205ENST00000353909 ZBED9Q6R2W3 1325 aa21.2■□□□□ 0.98
MBD1-205ENST00000353909 TMC1Q8TDI8 760 aa21.19■□□□□ 0.98
MBD1-205ENST00000353909 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
MBD1-205ENST00000353909 TMF1P82094 1093 aa21.19■□□□□ 0.98
MBD1-205ENST00000353909 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
MBD1-205ENST00000353909 PANK3Q9H999 370 aa21.18■□□□□ 0.98
MBD1-205ENST00000353909 CFAP70Q5T0N1 1121 aa21.17■□□□□ 0.98
MBD1-205ENST00000353909 NPATQ14207 1427 aa21.16■□□□□ 0.98
MBD1-205ENST00000353909 NEO1Q92859 1461 aa21.15■□□□□ 0.98
MBD1-205ENST00000353909 IQGAP1P46940 1657 aa21.15■□□□□ 0.98
MBD1-205ENST00000353909 MYBBP1AQ9BQG0 1328 aaKnown RBP21.15■□□□□ 0.98
MBD1-205ENST00000353909 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
MBD1-205ENST00000353909 CHGAP10645 457 aaKnown RBP21.15■□□□□ 0.98
MBD1-205ENST00000353909 RALBP1Q15311 655 aa21.14■□□□□ 0.98
MBD1-205ENST00000353909 CC2D1BQ5T0F9 858 aaKnown RBP21.14■□□□□ 0.98
MBD1-205ENST00000353909 MROH2AA6NES4 1674 aa21.14■□□□□ 0.98
MBD1-205ENST00000353909 WASHC2CQ9Y4E1 1318 aa21.14■□□□□ 0.97
MBD1-205ENST00000353909 KIF1BO60333 1816 aa21.13■□□□□ 0.97
MBD1-205ENST00000353909 SCAF11Q99590 1463 aaKnown RBP21.12■□□□□ 0.97
MBD1-205ENST00000353909 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
MBD1-205ENST00000353909 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
MBD1-205ENST00000353909 KTN1Q86UP2 1357 aaKnown RBP21.11■□□□□ 0.97
MBD1-205ENST00000353909 YEATS2Q9ULM3 1422 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms