RNA–Protein interactions for RNA: ENST00000352940.8

DDX47-201, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best) BASIC

Gene DDX47, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-201ENST00000352940 RAPGEF3O95398 923 aa11.28□□□□□ -0.6
DDX47-201ENST00000352940 EMP3P54852 163 aa11.27□□□□□ -0.61
DDX47-201ENST00000352940 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
DDX47-201ENST00000352940 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
DDX47-201ENST00000352940 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
DDX47-201ENST00000352940 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
DDX47-201ENST00000352940 NEO1Q92859 1461 aa11.23□□□□□ -0.61
DDX47-201ENST00000352940 PHLDB1Q86UU1 1377 aa11.23□□□□□ -0.61
DDX47-201ENST00000352940 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
DDX47-201ENST00000352940 ADAMTSL3P82987 1691 aa11.22□□□□□ -0.61
DDX47-201ENST00000352940 FRMPD1Q5SYB0 1578 aa11.22□□□□□ -0.61
DDX47-201ENST00000352940 PLEKHD1A6NEE1 506 aa11.21□□□□□ -0.61
DDX47-201ENST00000352940 PTPRMP28827 1452 aa11.21□□□□□ -0.61
DDX47-201ENST00000352940 EEA1Q15075 1411 aa11.21□□□□□ -0.61
DDX47-201ENST00000352940 DCAF8Q5TAQ9 597 aa11.2□□□□□ -0.62
DDX47-201ENST00000352940 BCORL1Q5H9F3 1711 aa11.2□□□□□ -0.62
DDX47-201ENST00000352940 MADDQ8WXG6 1647 aa11.2□□□□□ -0.62
DDX47-201ENST00000352940 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
DDX47-201ENST00000352940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.18□□□□□ -0.62
DDX47-201ENST00000352940 DENND4BO75064 1496 aaPredicted RBP11.18□□□□□ -0.62
DDX47-201ENST00000352940 TTC37Q6PGP7 1564 aa11.18□□□□□ -0.62
DDX47-201ENST00000352940 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
DDX47-201ENST00000352940 PYGBP11216 843 aa11.17□□□□□ -0.62
DDX47-201ENST00000352940 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
DDX47-201ENST00000352940 RICTORQ6R327 1708 aa11.17□□□□□ -0.62
DDX47-201ENST00000352940 FANCAO15360 1455 aa11.17□□□□□ -0.62
DDX47-201ENST00000352940 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
DDX47-201ENST00000352940 CDK13Q14004 1512 aaKnown RBP11.17□□□□□ -0.62
DDX47-201ENST00000352940 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
DDX47-201ENST00000352940 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
DDX47-201ENST00000352940 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
DDX47-201ENST00000352940 ARHGEF40Q8TER5 1519 aa11.16□□□□□ -0.62
DDX47-201ENST00000352940 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
DDX47-201ENST00000352940 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
DDX47-201ENST00000352940 ZNF467Q7Z7K2 595 aaPredicted RBP11.14□□□□□ -0.63
DDX47-201ENST00000352940 PDCD7Q8N8D1 485 aaKnown RBP11.14□□□□□ -0.63
DDX47-201ENST00000352940 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
DDX47-201ENST00000352940 KRTAP3-3Q9BYR6 98 aa11.14□□□□□ -0.63
DDX47-201ENST00000352940 KRTAP3-2Q9BYR7 98 aa11.14□□□□□ -0.63
DDX47-201ENST00000352940 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
DDX47-201ENST00000352940 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
DDX47-201ENST00000352940 MLECQ14165 292 aa11.13□□□□□ -0.63
DDX47-201ENST00000352940 YEATS2Q9ULM3 1422 aa11.13□□□□□ -0.63
DDX47-201ENST00000352940 ZFYVE16Q7Z3T8 1539 aa11.12□□□□□ -0.63
DDX47-201ENST00000352940 SIGLEC1Q9BZZ2 1709 aa11.12□□□□□ -0.63
DDX47-201ENST00000352940 LMTK3Q96Q04 1460 aa11.11□□□□□ -0.63
DDX47-201ENST00000352940 HECW1Q76N89 1606 aa11.11□□□□□ -0.63
DDX47-201ENST00000352940 HSPA2P54652 639 aa11.11□□□□□ -0.63
DDX47-201ENST00000352940 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
DDX47-201ENST00000352940 ZMYM4Q5VZL5 1548 aa11.11□□□□□ -0.63
DDX47-201ENST00000352940 POGZQ7Z3K3 1410 aa11.1□□□□□ -0.63
DDX47-201ENST00000352940 SCAPERQ9BY12 1400 aa11.1□□□□□ -0.63
DDX47-201ENST00000352940 MYO5CQ9NQX4 1742 aa11.08□□□□□ -0.64
DDX47-201ENST00000352940 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
DDX47-201ENST00000352940 PLCH2O75038 1416 aa11.08□□□□□ -0.64
DDX47-201ENST00000352940 FMN1Q68DA7 1419 aa11.07□□□□□ -0.64
DDX47-201ENST00000352940 ARHGAP35Q9NRY4 1499 aa11.07□□□□□ -0.64
DDX47-201ENST00000352940 KIF14Q15058 1648 aa11.07□□□□□ -0.64
DDX47-201ENST00000352940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.641e-8■■■■□ 20.7
DDX47-201ENST00000352940 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
DDX47-201ENST00000352940 GSE1Q14687 1217 aa11.06□□□□□ -0.64
DDX47-201ENST00000352940 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
DDX47-201ENST00000352940 EFCAB2Q5VUJ9 269 aa11.05□□□□□ -0.64
DDX47-201ENST00000352940 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
DDX47-201ENST00000352940 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
DDX47-201ENST00000352940 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
DDX47-201ENST00000352940 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
DDX47-201ENST00000352940 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
DDX47-201ENST00000352940 G3V3G9 751 aa11.04□□□□□ -0.64
DDX47-201ENST00000352940 ATP10AO60312 1499 aa11.03□□□□□ -0.64
DDX47-201ENST00000352940 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
DDX47-201ENST00000352940 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.64
DDX47-201ENST00000352940 AFAP1Q8N556 730 aa11.02□□□□□ -0.64
DDX47-201ENST00000352940 CLIP1P30622 1438 aa11.02□□□□□ -0.65
DDX47-201ENST00000352940 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.65
DDX47-201ENST00000352940 ARHGEF12Q9NZN5 1544 aa11.01□□□□□ -0.65
DDX47-201ENST00000352940 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
DDX47-201ENST00000352940 FBXO3Q9UK99 471 aa11□□□□□ -0.65
DDX47-201ENST00000352940 CDC42BPBQ9Y5S2 1711 aa11□□□□□ -0.65
DDX47-201ENST00000352940 PREX1Q8TCU6 1659 aa10.99□□□□□ -0.65
DDX47-201ENST00000352940 PSEN1P49768 467 aa10.98□□□□□ -0.65
DDX47-201ENST00000352940 KDM5CP41229 1560 aa10.98□□□□□ -0.65
DDX47-201ENST00000352940 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
DDX47-201ENST00000352940 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
DDX47-201ENST00000352940 DIP2CQ9Y2E4 1556 aa10.97□□□□□ -0.65
DDX47-201ENST00000352940 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
DDX47-201ENST00000352940 RNF166Q96A37 237 aaPredicted RBP10.97□□□□□ -0.65
DDX47-201ENST00000352940 PREX2Q70Z35 1606 aa10.97□□□□□ -0.65
DDX47-201ENST00000352940 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
DDX47-201ENST00000352940 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
DDX47-201ENST00000352940 HOXB1P14653 301 aaPredicted RBP10.95□□□□□ -0.66
DDX47-201ENST00000352940 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
DDX47-201ENST00000352940 ITSN2Q9NZM3 1697 aa10.95□□□□□ -0.66
DDX47-201ENST00000352940 CCDC18Q5T9S5 1454 aa10.95□□□□□ -0.66
DDX47-201ENST00000352940 ABCC1P33527 1531 aa10.95□□□□□ -0.66
DDX47-201ENST00000352940 ESF1Q9H501 851 aaKnown RBP10.95□□□□□ -0.66
DDX47-201ENST00000352940 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
DDX47-201ENST00000352940 CDC42BPAQ5VT25 1732 aa10.94□□□□□ -0.66
DDX47-201ENST00000352940 ZNF777Q9ULD5 760 aaPredicted RBP10.94□□□□□ -0.66
DDX47-201ENST00000352940 UHRF1BP1Q6BDS2 1440 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms