RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
APP-202ENST00000348990 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
APP-202ENST00000348990 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
APP-202ENST00000348990 WASHC2CQ9Y4E1 1318 aa23.27■■□□□ 1.31
APP-202ENST00000348990 FRAT2O75474 233 aaPredicted RBP23.25■■□□□ 1.31
APP-202ENST00000348990 ARXQ96QS3 562 aa23.24■■□□□ 1.31
APP-202ENST00000348990 IQGAP2Q13576 1575 aa23.24■■□□□ 1.31
APP-202ENST00000348990 FAM161AQ3B820 660 aa23.23■■□□□ 1.31
APP-202ENST00000348990 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
APP-202ENST00000348990 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
APP-202ENST00000348990 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.311e-6■□□□□ 11.1
APP-202ENST00000348990 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.21■■□□□ 1.31
APP-202ENST00000348990 CENPQQ7L2Z9 268 aaPredicted RBP23.21■■□□□ 1.31
APP-202ENST00000348990 DNMT1P26358 1616 aaKnown RBP23.21■■□□□ 1.31
APP-202ENST00000348990 PLEKHD1A6NEE1 506 aa23.21■■□□□ 1.31
APP-202ENST00000348990 CAMSAP2Q08AD1 1489 aa23.2■■□□□ 1.3
APP-202ENST00000348990 WDR62O43379 1518 aa23.2■■□□□ 1.3
APP-202ENST00000348990 KDM5CP41229 1560 aa23.19■■□□□ 1.3
APP-202ENST00000348990 RALGAPBQ86X10 1494 aa23.18■■□□□ 1.3
APP-202ENST00000348990 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
APP-202ENST00000348990 POLR1AO95602 1720 aaPredicted RBP23.17■■□□□ 1.3
APP-202ENST00000348990 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
APP-202ENST00000348990 PER1O15534 1290 aaPredicted RBP23.15■■□□□ 1.3
APP-202ENST00000348990 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
APP-202ENST00000348990 TMF1P82094 1093 aa23.15■■□□□ 1.3
APP-202ENST00000348990 CCDC146Q8IYE0 955 aa23.15■■□□□ 1.3
APP-202ENST00000348990 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
APP-202ENST00000348990 KIF14Q15058 1648 aa23.14■■□□□ 1.29
APP-202ENST00000348990 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
APP-202ENST00000348990 SLKQ9H2G2 1235 aaPredicted RBP23.13■■□□□ 1.29
APP-202ENST00000348990 NUP153P49790 1475 aaKnown RBP23.13■■□□□ 1.29
APP-202ENST00000348990 TROQ12816 1431 aaPredicted RBP23.12■■□□□ 1.29
APP-202ENST00000348990 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
APP-202ENST00000348990 UHRF1BP1Q6BDS2 1440 aa23.1■■□□□ 1.29
APP-202ENST00000348990 C8orf34Q49A92 452 aa23.1■■□□□ 1.29
APP-202ENST00000348990 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
APP-202ENST00000348990 GPATCH8Q9UKJ3 1502 aaKnown RBP23.08■■□□□ 1.29
APP-202ENST00000348990 CCDC144AA2RUR9 1427 aa23.06■■□□□ 1.28
APP-202ENST00000348990 DISP3Q9P2K9 1392 aa23.06■■□□□ 1.28
APP-202ENST00000348990 KIAA0586Q9BVV6 1533 aa23.06■■□□□ 1.28
APP-202ENST00000348990 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
APP-202ENST00000348990 KDM2BQ8NHM5 1336 aa23.05■■□□□ 1.28
APP-202ENST00000348990 C9orf84Q5VXU9 1444 aa23.05■■□□□ 1.28
APP-202ENST00000348990 BCAR3O75815 825 aa23.04■■□□□ 1.28
APP-202ENST00000348990 PLB1Q6P1J6 1458 aa23.03■■□□□ 1.28
APP-202ENST00000348990 APAF1O14727 1248 aa23.01■■□□□ 1.27
APP-202ENST00000348990 PPP2R1AP30153 589 aa23.01■■□□□ 1.27
APP-202ENST00000348990 SPRYD3Q8NCJ5 442 aa23.01■■□□□ 1.27
APP-202ENST00000348990 BECN1Q14457 450 aa23■■□□□ 1.27
APP-202ENST00000348990 NEUROD2Q15784 382 aa23■■□□□ 1.27
APP-202ENST00000348990 PLEKHH1Q9ULM0 1364 aa23■■□□□ 1.27
APP-202ENST00000348990 POGKQ9P215 609 aa23■■□□□ 1.27
APP-202ENST00000348990 TESK2Q96S53 571 aa22.99■■□□□ 1.27
APP-202ENST00000348990 COG6Q9Y2V7 657 aa22.96■■□□□ 1.27
APP-202ENST00000348990 DISP1Q96F81 1524 aa22.95■■□□□ 1.26
APP-202ENST00000348990 ERBINQ96RT1 1412 aa22.95■■□□□ 1.26
APP-202ENST00000348990 UPF2Q9HAU5 1272 aaKnown RBP22.95■■□□□ 1.26
APP-202ENST00000348990 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
APP-202ENST00000348990 RAPGEF6Q8TEU7 1601 aa22.94■■□□□ 1.26
APP-202ENST00000348990 IGHDP01880 384 aa22.93■■□□□ 1.26
APP-202ENST00000348990 JPH4Q96JJ6 628 aa22.93■■□□□ 1.26
APP-202ENST00000348990 GZF1Q9H116 711 aaPredicted RBP22.93■■□□□ 1.26
APP-202ENST00000348990 BLMP54132 1417 aaPredicted RBP22.93■■□□□ 1.26
APP-202ENST00000348990 SLFN5Q08AF3 891 aa22.93■■□□□ 1.26
APP-202ENST00000348990 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
APP-202ENST00000348990 PANK1Q8TE04 598 aa22.93■■□□□ 1.26
APP-202ENST00000348990 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
APP-202ENST00000348990 SPINK5Q9NQ38 1064 aaPredicted RBP22.92■■□□□ 1.26
APP-202ENST00000348990 SEC24BO95487 1268 aa22.92■■□□□ 1.26
APP-202ENST00000348990 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
APP-202ENST00000348990 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
APP-202ENST00000348990 KIAA0556O60303 1618 aa22.89■■□□□ 1.26
APP-202ENST00000348990 FAM43AQ8N2R8 423 aa22.89■■□□□ 1.26
APP-202ENST00000348990 RSPH6AQ9H0K4 717 aa22.89■■□□□ 1.26
APP-202ENST00000348990 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
APP-202ENST00000348990 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
APP-202ENST00000348990 ZMYM4Q5VZL5 1548 aa22.86■■□□□ 1.25
APP-202ENST00000348990 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
APP-202ENST00000348990 CLUAP1Q96AJ1 413 aa22.85■■□□□ 1.25
APP-202ENST00000348990 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
APP-202ENST00000348990 PBRM1Q86U86 1689 aa22.85■■□□□ 1.25
APP-202ENST00000348990 ADGBQ8N7X0 1667 aa22.85■■□□□ 1.25
APP-202ENST00000348990 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
APP-202ENST00000348990 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
APP-202ENST00000348990 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
APP-202ENST00000348990 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
APP-202ENST00000348990 UBE2Q2Q8WVN8 375 aa22.83■■□□□ 1.25
APP-202ENST00000348990 COL17A1Q9UMD9 1497 aaPredicted RBP22.83■■□□□ 1.25
APP-202ENST00000348990 E9PSI1 815 aa22.83■■□□□ 1.25
APP-202ENST00000348990 L1TD1Q5T7N2 865 aaKnown RBP22.82■■□□□ 1.24
APP-202ENST00000348990 ITSN2Q9NZM3 1697 aa22.82■■□□□ 1.24
APP-202ENST00000348990 NAP1L5Q96NT1 182 aaPredicted RBP22.82■■□□□ 1.24
APP-202ENST00000348990 AMER1Q5JTC6 1135 aaPredicted RBP22.81■■□□□ 1.24
APP-202ENST00000348990 CGNL1Q0VF96 1302 aa22.81■■□□□ 1.24
APP-202ENST00000348990 DMRT2Q9Y5R5 561 aa22.81■■□□□ 1.24
APP-202ENST00000348990 MAPK8IP3Q9UPT6 1336 aa22.8■■□□□ 1.24
APP-202ENST00000348990 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
APP-202ENST00000348990 A2MP01023 1474 aa22.76■■□□□ 1.23
APP-202ENST00000348990 ZNF521Q96K83 1311 aa22.76■■□□□ 1.23
APP-202ENST00000348990 GRIN2AQ12879 1464 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms