RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ZFYVE16Q7Z3T8 1539 aa29.6■■■□□ 2.33
PTPN18-202ENST00000347849 SCAPERQ9BY12 1400 aa29.59■■■□□ 2.33
PTPN18-202ENST00000347849 NEFLP07196 543 aa29.59■■■□□ 2.33
PTPN18-202ENST00000347849 ADGRL1O94910 1474 aa29.58■■■□□ 2.33
PTPN18-202ENST00000347849 CCER2I3L3R5 266 aa29.57■■■□□ 2.32
PTPN18-202ENST00000347849 IQGAP3Q86VI3 1631 aa29.57■■■□□ 2.32
PTPN18-202ENST00000347849 DCAF11Q8TEB1 546 aa29.56■■■□□ 2.32
PTPN18-202ENST00000347849 MAGI2Q86UL8 1455 aa29.56■■■□□ 2.32
PTPN18-202ENST00000347849 RTEL1-TNFRSF6BF6WH68 1400 aa29.56■■■□□ 2.32
PTPN18-202ENST00000347849 CCDC144AA2RUR9 1427 aa29.53■■■□□ 2.32
PTPN18-202ENST00000347849 UHRF1BP1Q6BDS2 1440 aa29.52■■■□□ 2.32
PTPN18-202ENST00000347849 CCDC7Q96M83 1385 aa29.52■■■□□ 2.32
PTPN18-202ENST00000347849 RGL3Q3MIN7 710 aa29.51■■■□□ 2.32
PTPN18-202ENST00000347849 MYT1LQ9UL68 1186 aa29.51■■■□□ 2.32
PTPN18-202ENST00000347849 ATP7AQ04656 1500 aa29.49■■■□□ 2.31
PTPN18-202ENST00000347849 USP47Q96K76 1375 aa29.48■■■□□ 2.31
PTPN18-202ENST00000347849 INO80Q9ULG1 1556 aaPredicted RBP29.48■■■□□ 2.31
PTPN18-202ENST00000347849 KIF7Q2M1P5 1343 aa29.47■■■□□ 2.31
PTPN18-202ENST00000347849 CD109Q6YHK3 1445 aa29.46■■■□□ 2.31
PTPN18-202ENST00000347849 RBM19Q9Y4C8 960 aaKnown RBP29.45■■■□□ 2.3
PTPN18-202ENST00000347849 RALGAPBQ86X10 1494 aa29.43■■■□□ 2.3
PTPN18-202ENST00000347849 KIF3BO15066 747 aa29.42■■■□□ 2.3
PTPN18-202ENST00000347849 CYB5RLQ6IPT4 315 aa29.42■■■□□ 2.3
PTPN18-202ENST00000347849 CARD11Q9BXL7 1154 aa29.41■■■□□ 2.3
PTPN18-202ENST00000347849 CNTLNQ9NXG0 1405 aa29.4■■■□□ 2.3
PTPN18-202ENST00000347849 KDM5CP41229 1560 aa29.39■■■□□ 2.3
PTPN18-202ENST00000347849 A2MP01023 1474 aa29.38■■■□□ 2.29
PTPN18-202ENST00000347849 BCORL1Q5H9F3 1711 aa29.38■■■□□ 2.29
PTPN18-202ENST00000347849 ATP10AO60312 1499 aa29.37■■■□□ 2.29
PTPN18-202ENST00000347849 DHX29Q7Z478 1369 aaKnown RBP29.36■■■□□ 2.29
PTPN18-202ENST00000347849 E9PCH4 1651 aa29.35■■■□□ 2.29
PTPN18-202ENST00000347849 KIDINS220Q9ULH0 1771 aa29.34■■■□□ 2.29
PTPN18-202ENST00000347849 PRAG1Q86YV5 1406 aa29.34■■■□□ 2.29
PTPN18-202ENST00000347849 DEPDC5O75140 1603 aa29.33■■■□□ 2.29
PTPN18-202ENST00000347849 NBPF1Q3BBV0 1214 aa29.33■■■□□ 2.29
PTPN18-202ENST00000347849 ZNF518AQ6AHZ1 1483 aa29.32■■■□□ 2.28
PTPN18-202ENST00000347849 POLR3GLQ9BT43 218 aa29.32■■■□□ 2.28
PTPN18-202ENST00000347849 ST20-MTHFSA0A0A6YYL1 179 aa29.31■■■□□ 2.28
PTPN18-202ENST00000347849 ROCK2O75116 1388 aaKnown RBP29.31■■■□□ 2.28
PTPN18-202ENST00000347849 POGZQ7Z3K3 1410 aa29.29■■■□□ 2.28
PTPN18-202ENST00000347849 MROH1Q8NDA8 1641 aa29.28■■■□□ 2.28
PTPN18-202ENST00000347849 RAPGEF3O95398 923 aa29.27■■■□□ 2.28
PTPN18-202ENST00000347849 VWDEQ8N2E2 1590 aa29.26■■■□□ 2.28
PTPN18-202ENST00000347849 POLR1AO95602 1720 aaPredicted RBP29.26■■■□□ 2.27
PTPN18-202ENST00000347849 CCDC184Q52MB2 194 aa29.26■■■□□ 2.27
PTPN18-202ENST00000347849 TRPM1Q7Z4N2 1603 aa29.24■■■□□ 2.27
PTPN18-202ENST00000347849 KANK1Q14678 1352 aa29.23■■■□□ 2.27
PTPN18-202ENST00000347849 PTPRTO14522 1441 aa29.23■■■□□ 2.27
PTPN18-202ENST00000347849 HNRNPUQ00839 825 aaKnown RBP eCLIP29.22■■■□□ 2.27
PTPN18-202ENST00000347849 PRKRIP1Q9H875 184 aaPredicted RBP29.22■■■□□ 2.27
PTPN18-202ENST00000347849 PRDM15P57071 1507 aaPredicted RBP29.21■■■□□ 2.27
PTPN18-202ENST00000347849 RIMBP3CA6NJZ7 1639 aa29.21■■■□□ 2.27
PTPN18-202ENST00000347849 RIMBP3BA6NNM3 1639 aa29.21■■■□□ 2.27
PTPN18-202ENST00000347849 RIMBP3Q9UFD9 1639 aa29.21■■■□□ 2.27
PTPN18-202ENST00000347849 TET3O43151 1660 aa29.21■■■□□ 2.27
PTPN18-202ENST00000347849 TRPM2O94759 1503 aa29.21■■■□□ 2.27
PTPN18-202ENST00000347849 EIF2AK4Q9P2K8 1649 aaKnown RBP29.2■■■□□ 2.26
PTPN18-202ENST00000347849 CFAP74Q9C0B2 1584 aa29.19■■■□□ 2.26
PTPN18-202ENST00000347849 MLH3Q9UHC1 1453 aa29.18■■■□□ 2.26
PTPN18-202ENST00000347849 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
PTPN18-202ENST00000347849 CLTCL1P53675 1640 aa29.17■■■□□ 2.26
PTPN18-202ENST00000347849 CNGB1Q14028 1251 aaPredicted RBP29.17■■■□□ 2.26
PTPN18-202ENST00000347849 SPHKAPQ2M3C7 1700 aa29.17■■■□□ 2.26
PTPN18-202ENST00000347849 IRX6P78412 446 aaPredicted RBP29.16■■■□□ 2.26
PTPN18-202ENST00000347849 GPRASP1Q5JY77 1395 aa29.14■■■□□ 2.26
PTPN18-202ENST00000347849 UGGT1Q9NYU2 1555 aa29.14■■■□□ 2.26
PTPN18-202ENST00000347849 NEO1Q92859 1461 aa29.14■■■□□ 2.26
PTPN18-202ENST00000347849 GGT6Q6P531 493 aa29.14■■■□□ 2.25
PTPN18-202ENST00000347849 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
PTPN18-202ENST00000347849 ARID4BQ4LE39 1312 aaPredicted RBP29.11■■■□□ 2.25
PTPN18-202ENST00000347849 ABCA6Q8N139 1617 aa29.11■■■□□ 2.25
PTPN18-202ENST00000347849 MAP3K4Q9Y6R4 1608 aa29.08■■■□□ 2.25
PTPN18-202ENST00000347849 PPRC1Q5VV67 1664 aaKnown RBP29.08■■■□□ 2.25
PTPN18-202ENST00000347849 EFCAB6Q5THR3 1501 aa29.08■■■□□ 2.25
PTPN18-202ENST00000347849 MSH5O43196 834 aa29.07■■■□□ 2.24
PTPN18-202ENST00000347849 CEP152O94986 1710 aa29.07■■■□□ 2.24
PTPN18-202ENST00000347849 FAM69CQ0P6D2 419 aa29.06■■■□□ 2.24
PTPN18-202ENST00000347849 RNF17Q9BXT8 1623 aaKnown RBP29.05■■■□□ 2.24
PTPN18-202ENST00000347849 BCL11AQ9H165 835 aa29.04■■■□□ 2.24
PTPN18-202ENST00000347849 TESK2Q96S53 571 aa29.04■■■□□ 2.24
PTPN18-202ENST00000347849 MADDQ8WXG6 1647 aa29.03■■■□□ 2.24
PTPN18-202ENST00000347849 LMTK2Q8IWU2 1503 aa29.02■■■□□ 2.24
PTPN18-202ENST00000347849 MRS2Q9HD23 443 aa29.01■■■□□ 2.24
PTPN18-202ENST00000347849 YEATS2Q9ULM3 1422 aa29.01■■■□□ 2.23
PTPN18-202ENST00000347849 NPATQ14207 1427 aa28.99■■■□□ 2.23
PTPN18-202ENST00000347849 DISP3Q9P2K9 1392 aa28.99■■■□□ 2.23
PTPN18-202ENST00000347849 LAMC1P11047 1609 aa28.98■■■□□ 2.23
PTPN18-202ENST00000347849 RICTORQ6R327 1708 aa28.98■■■□□ 2.23
PTPN18-202ENST00000347849 GLI2P10070 1586 aa28.98■■■□□ 2.23
PTPN18-202ENST00000347849 DIP2CQ9Y2E4 1556 aa28.98■■■□□ 2.23
PTPN18-202ENST00000347849 WASHC2CQ9Y4E1 1318 aa28.97■■■□□ 2.23
PTPN18-202ENST00000347849 FAM9BQ8IZU0 186 aa28.97■■■□□ 2.23
PTPN18-202ENST00000347849 DIP2BQ9P265 1576 aa28.94■■■□□ 2.22
PTPN18-202ENST00000347849 ADGRF5Q8IZF2 1346 aa28.93■■■□□ 2.22
PTPN18-202ENST00000347849 CFAP65Q6ZU64 1925 aaKnown RBP28.93■■■□□ 2.22
PTPN18-202ENST00000347849 ABCC3O15438 1527 aa28.92■■■□□ 2.22
PTPN18-202ENST00000347849 FANCIQ9NVI1 1328 aa28.91■■■□□ 2.22
PTPN18-202ENST00000347849 COL17A1Q9UMD9 1497 aaPredicted RBP28.91■■■□□ 2.22
PTPN18-202ENST00000347849 CHGAP10645 457 aaKnown RBP28.9■■■□□ 2.22
PTPN18-202ENST00000347849 MROH2AA6NES4 1674 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms