RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 FAM43AQ8N2R8 423 aa19.58■□□□□ 0.73
SRPK1-201ENST00000346162 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
SRPK1-201ENST00000346162 ZBED9Q6R2W3 1325 aa19.58■□□□□ 0.72
SRPK1-201ENST00000346162 TNNT3P45378 269 aaPredicted RBP19.57■□□□□ 0.72
SRPK1-201ENST00000346162 FAM13BQ9NYF5 915 aa19.57■□□□□ 0.72
SRPK1-201ENST00000346162 WASHC2CQ9Y4E1 1318 aa19.56■□□□□ 0.72
SRPK1-201ENST00000346162 CASC1Q6TDU7 716 aa19.56■□□□□ 0.72
SRPK1-201ENST00000346162 SOX12O15370 315 aa19.55■□□□□ 0.72
SRPK1-201ENST00000346162 NESP48681 1621 aa19.55■□□□□ 0.72
SRPK1-201ENST00000346162 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
SRPK1-201ENST00000346162 CCDC7Q96M83 1385 aa19.54■□□□□ 0.72
SRPK1-201ENST00000346162 TPRNQ4KMQ1 711 aa19.53■□□□□ 0.72
SRPK1-201ENST00000346162 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
SRPK1-201ENST00000346162 KIF7Q2M1P5 1343 aa19.53■□□□□ 0.72
SRPK1-201ENST00000346162 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.72
SRPK1-201ENST00000346162 PTMSP20962 102 aa19.52■□□□□ 0.72
SRPK1-201ENST00000346162 GBP4Q96PP9 640 aa19.52■□□□□ 0.71
SRPK1-201ENST00000346162 NUTM2DQ5VT03 806 aaPredicted RBP19.51■□□□□ 0.71
SRPK1-201ENST00000346162 ZMYND15Q9H091 742 aa19.51■□□□□ 0.71
SRPK1-201ENST00000346162 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
SRPK1-201ENST00000346162 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
SRPK1-201ENST00000346162 TOPBP1Q92547 1522 aa19.5■□□□□ 0.71
SRPK1-201ENST00000346162 ANKRD50Q9ULJ7 1429 aa19.5■□□□□ 0.71
SRPK1-201ENST00000346162 WASHC2AQ641Q2 1341 aa19.49■□□□□ 0.71
SRPK1-201ENST00000346162 IPO8O15397 1037 aaKnown RBP19.49■□□□□ 0.71
SRPK1-201ENST00000346162 RRP9O43818 475 aaKnown RBP19.49■□□□□ 0.71
SRPK1-201ENST00000346162 KIAA2012Q0VF49 1180 aa19.48■□□□□ 0.71
SRPK1-201ENST00000346162 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
SRPK1-201ENST00000346162 A0A0G2JS52 829 aa19.47■□□□□ 0.71
SRPK1-201ENST00000346162 TERF2IPQ9NYB0 399 aa19.47■□□□□ 0.71
SRPK1-201ENST00000346162 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
SRPK1-201ENST00000346162 BICRAQ9NZM4 1560 aa19.46■□□□□ 0.71
SRPK1-201ENST00000346162 TIAM1Q13009 1591 aa19.45■□□□□ 0.7
SRPK1-201ENST00000346162 RWDD1Q9H446 243 aaPredicted RBP19.45■□□□□ 0.7
SRPK1-201ENST00000346162 CNTLNQ9NXG0 1405 aa19.44■□□□□ 0.7
SRPK1-201ENST00000346162 CENPJQ9HC77 1338 aaPredicted RBP19.43■□□□□ 0.7
SRPK1-201ENST00000346162 CALD1Q05682 793 aaKnown RBP19.42■□□□□ 0.7
SRPK1-201ENST00000346162 ITPRIPQ8IWB1 547 aa19.42■□□□□ 0.7
SRPK1-201ENST00000346162 CLUAP1Q96AJ1 413 aa19.42■□□□□ 0.7
SRPK1-201ENST00000346162 HFM1A2PYH4 1435 aa19.42■□□□□ 0.7
SRPK1-201ENST00000346162 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
SRPK1-201ENST00000346162 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
SRPK1-201ENST00000346162 PRDM2Q13029 1718 aa19.4■□□□□ 0.7
SRPK1-201ENST00000346162 SMC4Q9NTJ3 1288 aa19.4■□□□□ 0.7
SRPK1-201ENST00000346162 EXOC6Q8TAG9 804 aa19.4■□□□□ 0.7
SRPK1-201ENST00000346162 PLIN1O60240 522 aa19.4■□□□□ 0.7
SRPK1-201ENST00000346162 FAM161AQ3B820 660 aa19.39■□□□□ 0.7
SRPK1-201ENST00000346162 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
SRPK1-201ENST00000346162 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
SRPK1-201ENST00000346162 MAP7D2Q96T17 732 aa19.38■□□□□ 0.69
SRPK1-201ENST00000346162 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
SRPK1-201ENST00000346162 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
SRPK1-201ENST00000346162 VGFO15240 615 aaPredicted RBP19.37■□□□□ 0.69
SRPK1-201ENST00000346162 FRAT2O75474 233 aaPredicted RBP19.37■□□□□ 0.69
SRPK1-201ENST00000346162 OS9Q13438 667 aaPredicted RBP19.37■□□□□ 0.69
SRPK1-201ENST00000346162 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
SRPK1-201ENST00000346162 APAF1O14727 1248 aa19.35■□□□□ 0.69
SRPK1-201ENST00000346162 TPM2P07951 284 aa19.35■□□□□ 0.69
SRPK1-201ENST00000346162 NBPF8Q3BBV2 869 aa19.35■□□□□ 0.69
SRPK1-201ENST00000346162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.35■□□□□ 0.69
SRPK1-201ENST00000346162 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.34■□□□□ 0.69
SRPK1-201ENST00000346162 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
SRPK1-201ENST00000346162 DDX11L8A8MPP1 907 aa19.34■□□□□ 0.69
SRPK1-201ENST00000346162 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.69
SRPK1-201ENST00000346162 DNMBPQ6XZF7 1577 aa19.33■□□□□ 0.69
SRPK1-201ENST00000346162 APBB1O00213 710 aa19.33■□□□□ 0.68
SRPK1-201ENST00000346162 STAC3Q96MF2 364 aa19.33■□□□□ 0.68
SRPK1-201ENST00000346162 CGNL1Q0VF96 1302 aa19.32■□□□□ 0.68
SRPK1-201ENST00000346162 E9PSI1 815 aa19.32■□□□□ 0.68
SRPK1-201ENST00000346162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.32■□□□□ 0.684e-7■■■□□ 14.6
SRPK1-201ENST00000346162 EVC2Q86UK5 1308 aa19.31■□□□□ 0.68
SRPK1-201ENST00000346162 CRBNQ96SW2 442 aa19.31■□□□□ 0.68
SRPK1-201ENST00000346162 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
SRPK1-201ENST00000346162 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
SRPK1-201ENST00000346162 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
SRPK1-201ENST00000346162 CENPQQ7L2Z9 268 aaPredicted RBP19.29■□□□□ 0.68
SRPK1-201ENST00000346162 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
SRPK1-201ENST00000346162 TROQ12816 1431 aaPredicted RBP19.29■□□□□ 0.68
SRPK1-201ENST00000346162 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
SRPK1-201ENST00000346162 AFAP1Q8N556 730 aa19.29■□□□□ 0.68
SRPK1-201ENST00000346162 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
SRPK1-201ENST00000346162 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
SRPK1-201ENST00000346162 NAIPQ13075 1403 aa19.28■□□□□ 0.68
SRPK1-201ENST00000346162 MTERF4Q7Z6M4 381 aaKnown RBP19.28■□□□□ 0.68
SRPK1-201ENST00000346162 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
SRPK1-201ENST00000346162 MRE11P49959 708 aa19.27■□□□□ 0.68
SRPK1-201ENST00000346162 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
SRPK1-201ENST00000346162 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
SRPK1-201ENST00000346162 KCNJ4P48050 445 aa19.27■□□□□ 0.67
SRPK1-201ENST00000346162 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.67
SRPK1-201ENST00000346162 KIAA1107Q9UPP5 1409 aa19.26■□□□□ 0.67
SRPK1-201ENST00000346162 WDR97A6NE52 1622 aa19.26■□□□□ 0.67
SRPK1-201ENST00000346162 OSCARQ8IYS5 282 aa19.26■□□□□ 0.67
SRPK1-201ENST00000346162 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
SRPK1-201ENST00000346162 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
SRPK1-201ENST00000346162 BRD4O60885 1362 aaPredicted RBP19.25■□□□□ 0.67
SRPK1-201ENST00000346162 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
SRPK1-201ENST00000346162 GOLGA6L6A8MZA4 724 aa19.24■□□□□ 0.67
SRPK1-201ENST00000346162 NUTM2FA1L443 756 aa19.24■□□□□ 0.67
SRPK1-201ENST00000346162 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms