RNA–Protein interactions for RNA: ENST00000346144.8

MADCAM1-202, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-202ENST00000346144 GGT6Q6P531 493 aa35.44■■■■□ 3.26
MADCAM1-202ENST00000346144 DEPDC5O75140 1603 aa35.42■■■■□ 3.26
MADCAM1-202ENST00000346144 MROH1Q8NDA8 1641 aa35.42■■■■□ 3.26
MADCAM1-202ENST00000346144 PPP6R1Q9UPN7 881 aa35.39■■■■□ 3.26
MADCAM1-202ENST00000346144 FAM135AQ9P2D6 1515 aa35.39■■■■□ 3.26
MADCAM1-202ENST00000346144 HFM1A2PYH4 1435 aa35.39■■■■□ 3.26
MADCAM1-202ENST00000346144 NAIPQ13075 1403 aa35.39■■■■□ 3.26
MADCAM1-202ENST00000346144 PRDM15P57071 1507 aaPredicted RBP35.37■■■■□ 3.25
MADCAM1-202ENST00000346144 CNTLNQ9NXG0 1405 aa35.36■■■■□ 3.25
MADCAM1-202ENST00000346144 CLTCQ00610 1675 aaKnown RBP35.36■■■■□ 3.25
MADCAM1-202ENST00000346144 MROH2AA6NES4 1674 aa35.35■■■■□ 3.25
MADCAM1-202ENST00000346144 PTPRMP28827 1452 aa35.33■■■■□ 3.25
MADCAM1-202ENST00000346144 KDM5DQ9BY66 1539 aa35.33■■■■□ 3.25
MADCAM1-202ENST00000346144 ESF1Q9H501 851 aaKnown RBP35.33■■■■□ 3.25
MADCAM1-202ENST00000346144 ZC3H13Q5T200 1668 aaKnown RBP35.33■■■■□ 3.25
MADCAM1-202ENST00000346144 UNC13BO14795 1591 aa35.31■■■■□ 3.24
MADCAM1-202ENST00000346144 CEP152O94986 1710 aa35.26■■■■□ 3.24
MADCAM1-202ENST00000346144 ABCC3O15438 1527 aa35.26■■■■□ 3.24
MADCAM1-202ENST00000346144 C3P01024 1663 aa35.26■■■■□ 3.24
MADCAM1-202ENST00000346144 VWDEQ8N2E2 1590 aa35.26■■■■□ 3.23
MADCAM1-202ENST00000346144 WASHC2CQ9Y4E1 1318 aa35.25■■■■□ 3.23
MADCAM1-202ENST00000346144 KANK1Q14678 1352 aa35.24■■■■□ 3.23
MADCAM1-202ENST00000346144 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.23■■■■□ 3.23
MADCAM1-202ENST00000346144 ZMYM3Q14202 1370 aa35.2■■■■□ 3.23
MADCAM1-202ENST00000346144 CAMSAP1Q5T5Y3 1602 aa35.19■■■■□ 3.22
MADCAM1-202ENST00000346144 LMTK2Q8IWU2 1503 aa35.18■■■■□ 3.22
MADCAM1-202ENST00000346144 IQGAP3Q86VI3 1631 aa35.16■■■■□ 3.22
MADCAM1-202ENST00000346144 SETD5Q9C0A6 1442 aa35.15■■■■□ 3.22
MADCAM1-202ENST00000346144 TRIM26Q12899 539 aaPredicted RBP35.14■■■■□ 3.22
MADCAM1-202ENST00000346144 CEBPAP49715 358 aaPredicted RBP35.13■■■■□ 3.21
MADCAM1-202ENST00000346144 PZPP20742 1482 aa35.1■■■■□ 3.21
MADCAM1-202ENST00000346144 TET3O43151 1660 aa35.1■■■■□ 3.21
MADCAM1-202ENST00000346144 PLPPR3Q6T4P5 718 aa35.09■■■■□ 3.21
MADCAM1-202ENST00000346144 NUP155O75694 1391 aa35.09■■■■□ 3.21
MADCAM1-202ENST00000346144 EFCAB6Q5THR3 1501 aa35.08■■■■□ 3.21
MADCAM1-202ENST00000346144 ARHGAP31Q2M1Z3 1444 aa35.07■■■■□ 3.2
MADCAM1-202ENST00000346144 NPATQ14207 1427 aa35.05■■■■□ 3.2
MADCAM1-202ENST00000346144 RAB3GAP2Q9H2M9 1393 aa35.04■■■■□ 3.2
MADCAM1-202ENST00000346144 ACIN1Q9UKV3 1341 aaKnown RBP35.01■■■■□ 3.2
MADCAM1-202ENST00000346144 SETD1BQ9UPS6 1966 aaKnown RBP35■■■■□ 3.19
MADCAM1-202ENST00000346144 TRIM52Q96A61 297 aa34.99■■■■□ 3.19
MADCAM1-202ENST00000346144 PREX1Q8TCU6 1659 aa34.98■■■■□ 3.19
MADCAM1-202ENST00000346144 CFAP65Q6ZU64 1925 aaKnown RBP34.97■■■■□ 3.19
MADCAM1-202ENST00000346144 RPRD2Q5VT52 1461 aaKnown RBP34.97■■■■□ 3.19
MADCAM1-202ENST00000346144 SPATA31D1Q6ZQQ2 1576 aa34.97■■■■□ 3.19
MADCAM1-202ENST00000346144 E9PCH4 1651 aa34.97■■■■□ 3.19
MADCAM1-202ENST00000346144 ERVK-7P63135 1459 aa34.95■■■■□ 3.19
MADCAM1-202ENST00000346144 FBXO31Q5XUX0 539 aaPredicted RBP34.95■■■■□ 3.19
MADCAM1-202ENST00000346144 HRCP23327 699 aa34.93■■■■□ 3.18
MADCAM1-202ENST00000346144 MYO3AQ8NEV4 1616 aa34.9■■■■□ 3.18
MADCAM1-202ENST00000346144 TNRQ92752 1358 aa34.9■■■■□ 3.18
MADCAM1-202ENST00000346144 UHRF1BP1Q6BDS2 1440 aa34.86■■■■□ 3.17
MADCAM1-202ENST00000346144 NOS1P29475 1434 aa34.85■■■■□ 3.17
MADCAM1-202ENST00000346144 SLC4A1APQ9BWU0 796 aaKnown RBP34.84■■■■□ 3.17
MADCAM1-202ENST00000346144 ZNF142P52746 1687 aaPredicted RBP34.84■■■■□ 3.17
MADCAM1-202ENST00000346144 LMTK3Q96Q04 1460 aa34.83■■■■□ 3.17
MADCAM1-202ENST00000346144 SYNMO15061 1565 aa34.82■■■■□ 3.16
MADCAM1-202ENST00000346144 NLRP1Q9C000 1473 aa34.8■■■■□ 3.16
MADCAM1-202ENST00000346144 SPHKAPQ2M3C7 1700 aa34.79■■■■□ 3.16
MADCAM1-202ENST00000346144 CEP170BQ9Y4F5 1589 aaPredicted RBP34.79■■■■□ 3.16
MADCAM1-202ENST00000346144 MPHOSPH9Q99550 1183 aa34.79■■■■□ 3.16
MADCAM1-202ENST00000346144 PKD2Q13563 968 aa34.78■■■■□ 3.16
MADCAM1-202ENST00000346144 A2ML1A8K2U0 1454 aa34.75■■■■□ 3.15
MADCAM1-202ENST00000346144 PTPRTO14522 1441 aa34.73■■■■□ 3.15
MADCAM1-202ENST00000346144 PIK3C2BO00750 1634 aa34.72■■■■□ 3.15
MADCAM1-202ENST00000346144 TRPM2O94759 1503 aa34.68■■■■□ 3.14
MADCAM1-202ENST00000346144 PCGF6Q9BYE7 350 aa34.67■■■■□ 3.14
MADCAM1-202ENST00000346144 SLC52A1Q9NWF4 448 aa34.67■■■■□ 3.14
MADCAM1-202ENST00000346144 UGGT1Q9NYU2 1555 aa34.66■■■■□ 3.14
MADCAM1-202ENST00000346144 KDM5AP29375 1690 aaKnown RBP34.65■■■■□ 3.14
MADCAM1-202ENST00000346144 UBR1Q8IWV7 1749 aa34.65■■■■□ 3.14
MADCAM1-202ENST00000346144 PLA2R1Q13018 1463 aa34.64■■■■□ 3.14
MADCAM1-202ENST00000346144 IDI1Q13907 227 aa34.63■■■■□ 3.13
MADCAM1-202ENST00000346144 FOXD1Q16676 465 aa34.63■■■■□ 3.13
MADCAM1-202ENST00000346144 HSPA2P54652 639 aa34.6■■■■□ 3.13
MADCAM1-202ENST00000346144 CLTCL1P53675 1640 aa34.59■■■■□ 3.13
MADCAM1-202ENST00000346144 ADGRB3O60242 1522 aa34.59■■■■□ 3.13
MADCAM1-202ENST00000346144 TMEM131LA2VDJ0 1609 aa34.55■■■■□ 3.12
MADCAM1-202ENST00000346144 THEMISQ8N1K5 641 aaPredicted RBP34.55■■■■□ 3.12
MADCAM1-202ENST00000346144 MYO5BQ9ULV0 1848 aa34.53■■■■□ 3.12
MADCAM1-202ENST00000346144 STAG3Q9UJ98 1225 aa34.52■■■■□ 3.12
MADCAM1-202ENST00000346144 KIF1BO60333 1816 aa34.51■■■■□ 3.11
MADCAM1-202ENST00000346144 STRCQ7RTU9 1775 aa34.48■■■■□ 3.11
MADCAM1-202ENST00000346144 CCDC144AA2RUR9 1427 aa34.47■■■■□ 3.11
MADCAM1-202ENST00000346144 SLIT1O75093 1534 aa34.47■■■■□ 3.11
MADCAM1-202ENST00000346144 ANKRD30BQ9BXX2 1392 aa34.46■■■■□ 3.11
MADCAM1-202ENST00000346144 POLR1AO95602 1720 aaPredicted RBP34.45■■■■□ 3.11
MADCAM1-202ENST00000346144 ILDR1Q86SU0 546 aaPredicted RBP34.45■■■■□ 3.11
MADCAM1-202ENST00000346144 ARHGAP23Q9P227 1491 aa34.44■■■■□ 3.1
MADCAM1-202ENST00000346144 CHGAP10645 457 aaKnown RBP34.43■■■■□ 3.1
MADCAM1-202ENST00000346144 DHX57Q6P158 1386 aaKnown RBP34.42■■■■□ 3.1
MADCAM1-202ENST00000346144 TMEM2Q9UHN6 1383 aa34.42■■■■□ 3.1
MADCAM1-202ENST00000346144 ANKLE2Q86XL3 938 aa34.36■■■■□ 3.09
MADCAM1-202ENST00000346144 NEURL4Q96JN8 1562 aa34.35■■■■□ 3.09
MADCAM1-202ENST00000346144 NCKAP5LQ9HCH0 1330 aa34.34■■■■□ 3.09
MADCAM1-202ENST00000346144 SCAF11Q99590 1463 aaKnown RBP34.34■■■■□ 3.09
MADCAM1-202ENST00000346144 ZFYVE9O95405 1425 aa34.34■■■■□ 3.09
MADCAM1-202ENST00000346144 RIMS2Q9UQ26 1411 aa34.32■■■■□ 3.08
MADCAM1-202ENST00000346144 SPATA31E1Q6ZUB1 1445 aa34.31■■■■□ 3.08
MADCAM1-202ENST00000346144 EID1Q9Y6B2 187 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms