RNA–Protein interactions for RNA: ENST00000345016.9

AP3D1-201, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AP3D1, Length 4,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-201ENST00000345016 SKOR2Q2VWA4 1001 aaPredicted RBP20.73■□□□□ 0.91
AP3D1-201ENST00000345016 CSPP1Q1MSJ5 1256 aa20.73■□□□□ 0.91
AP3D1-201ENST00000345016 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
AP3D1-201ENST00000345016 NPHP1O15259 732 aa20.72■□□□□ 0.91
AP3D1-201ENST00000345016 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
AP3D1-201ENST00000345016 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
AP3D1-201ENST00000345016 TPM4P67936 248 aa20.71■□□□□ 0.91
AP3D1-201ENST00000345016 ANKRD45Q5TZF3 282 aa20.71■□□□□ 0.91
AP3D1-201ENST00000345016 NFKBIBQ15653 356 aa20.69■□□□□ 0.9
AP3D1-201ENST00000345016 E9PSI1 815 aa20.69■□□□□ 0.9
AP3D1-201ENST00000345016 MLECQ14165 292 aa20.69■□□□□ 0.9
AP3D1-201ENST00000345016 ELL2O00472 640 aaPredicted RBP20.68■□□□□ 0.9
AP3D1-201ENST00000345016 APAF1O14727 1248 aa20.68■□□□□ 0.9
AP3D1-201ENST00000345016 HSP90B1P14625 803 aaKnown RBP20.67■□□□□ 0.9
AP3D1-201ENST00000345016 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
AP3D1-201ENST00000345016 EIF3AQ14152 1382 aaKnown RBP20.67■□□□□ 0.9
AP3D1-201ENST00000345016 CHMP5Q9NZZ3 219 aa20.66■□□□□ 0.9
AP3D1-201ENST00000345016 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
AP3D1-201ENST00000345016 TERF2IPQ9NYB0 399 aa20.66■□□□□ 0.9
AP3D1-201ENST00000345016 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
AP3D1-201ENST00000345016 KIF16BQ96L93 1317 aa20.65■□□□□ 0.9
AP3D1-201ENST00000345016 HDGFP51858 240 aaKnown RBP20.65■□□□□ 0.9
AP3D1-201ENST00000345016 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
AP3D1-201ENST00000345016 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.89
AP3D1-201ENST00000345016 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.893e-7■■■■■ 48.9
AP3D1-201ENST00000345016 GPATCH3Q96I76 525 aa20.63■□□□□ 0.89
AP3D1-201ENST00000345016 GOLGA6L1Q8N7Z2 621 aa20.62■□□□□ 0.89
AP3D1-201ENST00000345016 USP47Q96K76 1375 aa20.62■□□□□ 0.89
AP3D1-201ENST00000345016 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
AP3D1-201ENST00000345016 EFCAB2Q5VUJ9 269 aa20.61■□□□□ 0.89
AP3D1-201ENST00000345016 FAM43AQ8N2R8 423 aa20.61■□□□□ 0.89
AP3D1-201ENST00000345016 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
AP3D1-201ENST00000345016 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
AP3D1-201ENST00000345016 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
AP3D1-201ENST00000345016 KIF3BO15066 747 aa20.6■□□□□ 0.89
AP3D1-201ENST00000345016 CCDC34Q96HJ3 373 aa20.6■□□□□ 0.89
AP3D1-201ENST00000345016 LMOD3Q0VAK6 560 aa20.59■□□□□ 0.89
AP3D1-201ENST00000345016 SF3A1Q15459 793 aaKnown RBP20.59■□□□□ 0.89
AP3D1-201ENST00000345016 GORABQ5T7V8 394 aa20.59■□□□□ 0.89
AP3D1-201ENST00000345016 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
AP3D1-201ENST00000345016 PAK3O75914 559 aaPredicted RBP20.59■□□□□ 0.89
AP3D1-201ENST00000345016 NOC3LQ8WTT2 800 aaKnown RBP20.58■□□□□ 0.89
AP3D1-201ENST00000345016 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.89
AP3D1-201ENST00000345016 ZNF330Q9Y3S2 320 aaPredicted RBP20.58■□□□□ 0.89
AP3D1-201ENST00000345016 WIZO95785 1651 aa20.58■□□□□ 0.88
AP3D1-201ENST00000345016 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.88
AP3D1-201ENST00000345016 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
AP3D1-201ENST00000345016 BECN2A8MW95 431 aa20.56■□□□□ 0.88
AP3D1-201ENST00000345016 GOLGA6L19H0YKK7 550 aa20.56■□□□□ 0.88
AP3D1-201ENST00000345016 CLSTN1O94985 981 aa20.55■□□□□ 0.88
AP3D1-201ENST00000345016 CREBRFQ8IUR6 639 aa20.55■□□□□ 0.88
AP3D1-201ENST00000345016 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
AP3D1-201ENST00000345016 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
AP3D1-201ENST00000345016 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
AP3D1-201ENST00000345016 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.54■□□□□ 0.88
AP3D1-201ENST00000345016 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
AP3D1-201ENST00000345016 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
AP3D1-201ENST00000345016 DDX19BQ9UMR2 479 aa20.53■□□□□ 0.88
AP3D1-201ENST00000345016 ZNF771Q7L3S4 317 aaPredicted RBP20.52■□□□□ 0.88
AP3D1-201ENST00000345016 ZNF592Q92610 1267 aa20.52■□□□□ 0.88
AP3D1-201ENST00000345016 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.52■□□□□ 0.88
AP3D1-201ENST00000345016 DZIP1LQ8IYY4 767 aaKnown RBP20.52■□□□□ 0.88
AP3D1-201ENST00000345016 CCAR2Q8N163 923 aaKnown RBP20.52■□□□□ 0.88
AP3D1-201ENST00000345016 REC8O95072 547 aa20.52■□□□□ 0.87
AP3D1-201ENST00000345016 TPM3P06753 285 aa20.52■□□□□ 0.87
AP3D1-201ENST00000345016 KIF7Q2M1P5 1343 aa20.51■□□□□ 0.87
AP3D1-201ENST00000345016 CARMIL2Q6F5E8 1435 aa20.51■□□□□ 0.87
AP3D1-201ENST00000345016 ANO8Q9HCE9 1232 aaPredicted RBP20.51■□□□□ 0.87
AP3D1-201ENST00000345016 H3BQV1 296 aa20.51■□□□□ 0.87
AP3D1-201ENST00000345016 IFFO2Q5TF58 517 aa20.51■□□□□ 0.87
AP3D1-201ENST00000345016 CCDC7Q96M83 1385 aa20.5■□□□□ 0.87
AP3D1-201ENST00000345016 C22orf23Q9BZE7 217 aa20.5■□□□□ 0.87
AP3D1-201ENST00000345016 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
AP3D1-201ENST00000345016 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
AP3D1-201ENST00000345016 MRE11P49959 708 aa20.49■□□□□ 0.87
AP3D1-201ENST00000345016 RASSF8Q8NHQ8 419 aa20.49■□□□□ 0.87
AP3D1-201ENST00000345016 FRAT2O75474 233 aaPredicted RBP20.48■□□□□ 0.87
AP3D1-201ENST00000345016 FAM184AQ8NB25 1140 aa20.48■□□□□ 0.87
AP3D1-201ENST00000345016 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
AP3D1-201ENST00000345016 RSPH4AQ5TD94 716 aa20.48■□□□□ 0.87
AP3D1-201ENST00000345016 TAF7LQ5H9L4 462 aa20.46■□□□□ 0.87
AP3D1-201ENST00000345016 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
AP3D1-201ENST00000345016 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.87
AP3D1-201ENST00000345016 NUCB2P80303 420 aa20.45■□□□□ 0.87
AP3D1-201ENST00000345016 MCTP1Q6DN14 999 aa20.45■□□□□ 0.86
AP3D1-201ENST00000345016 PANK1Q8TE04 598 aa20.45■□□□□ 0.86
AP3D1-201ENST00000345016 AMPHP49418 695 aa20.44■□□□□ 0.86
AP3D1-201ENST00000345016 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
AP3D1-201ENST00000345016 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
AP3D1-201ENST00000345016 TOMM22Q9NS69 142 aa20.44■□□□□ 0.86
AP3D1-201ENST00000345016 A0A0U1RQG5 324 aaPredicted RBP20.44■□□□□ 0.86
AP3D1-201ENST00000345016 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
AP3D1-201ENST00000345016 R3HCC1Q9Y3T6 440 aaKnown RBP20.43■□□□□ 0.86
AP3D1-201ENST00000345016 CDCA7LQ96GN5 454 aa20.43■□□□□ 0.86
AP3D1-201ENST00000345016 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
AP3D1-201ENST00000345016 TRAK2O60296 914 aa20.43■□□□□ 0.86
AP3D1-201ENST00000345016 DIAPH3Q9NSV4 1193 aa20.43■□□□□ 0.86
AP3D1-201ENST00000345016 ANO2Q9NQ90 1003 aa20.42■□□□□ 0.86
AP3D1-201ENST00000345016 PES1O00541 588 aaKnown RBP20.42■□□□□ 0.86
AP3D1-201ENST00000345016 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms