RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 ARID4BQ4LE39 1312 aaPredicted RBP29.37■■■□□ 2.29
CCDC38-201ENST00000344280 PLA2R1Q13018 1463 aa29.37■■■□□ 2.29
CCDC38-201ENST00000344280 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
CCDC38-201ENST00000344280 UNC13BO14795 1591 aa29.36■■■□□ 2.29
CCDC38-201ENST00000344280 CCDC144AA2RUR9 1427 aa29.35■■■□□ 2.29
CCDC38-201ENST00000344280 ZBED9Q6R2W3 1325 aa29.34■■■□□ 2.29
CCDC38-201ENST00000344280 RGL3Q3MIN7 710 aa29.33■■■□□ 2.29
CCDC38-201ENST00000344280 ZCCHC11Q5TAX3 1644 aaKnown RBP29.32■■■□□ 2.28
CCDC38-201ENST00000344280 ROCK2O75116 1388 aaKnown RBP29.32■■■□□ 2.28
CCDC38-201ENST00000344280 PLXNC1O60486 1568 aa29.32■■■□□ 2.28
CCDC38-201ENST00000344280 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
CCDC38-201ENST00000344280 PLCH2O75038 1416 aa29.3■■■□□ 2.28
CCDC38-201ENST00000344280 PRAG1Q86YV5 1406 aa29.29■■■□□ 2.28
CCDC38-201ENST00000344280 IQGAP3Q86VI3 1631 aa29.26■■■□□ 2.27
CCDC38-201ENST00000344280 NBPF1Q3BBV0 1214 aa29.25■■■□□ 2.27
CCDC38-201ENST00000344280 DUOX2Q9NRD8 1548 aa29.24■■■□□ 2.27
CCDC38-201ENST00000344280 TRPM1Q7Z4N2 1603 aa29.24■■■□□ 2.27
CCDC38-201ENST00000344280 A2MP01023 1474 aa29.24■■■□□ 2.27
CCDC38-201ENST00000344280 EFCAB2Q5VUJ9 269 aa29.23■■■□□ 2.27
CCDC38-201ENST00000344280 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
CCDC38-201ENST00000344280 TRAPPC8Q9Y2L5 1435 aa29.23■■■□□ 2.27
CCDC38-201ENST00000344280 ABCC1P33527 1531 aa29.2■■■□□ 2.26
CCDC38-201ENST00000344280 ERBINQ96RT1 1412 aa29.19■■■□□ 2.26
CCDC38-201ENST00000344280 MAGI2Q86UL8 1455 aa29.19■■■□□ 2.26
CCDC38-201ENST00000344280 SENP3-EIF4A1A0A087X0R7 540 aa29.17■■■□□ 2.26
CCDC38-201ENST00000344280 PNISRQ8TF01 805 aaKnown RBP29.15■■■□□ 2.26
CCDC38-201ENST00000344280 AFAP1Q8N556 730 aa29.14■■■□□ 2.25
CCDC38-201ENST00000344280 E9PCH4 1651 aa29.13■■■□□ 2.25
CCDC38-201ENST00000344280 GPRASP1Q5JY77 1395 aa29.13■■■□□ 2.25
CCDC38-201ENST00000344280 ATP10AO60312 1499 aa29.12■■■□□ 2.25
CCDC38-201ENST00000344280 TMC1Q8TDI8 760 aa29.11■■■□□ 2.25
CCDC38-201ENST00000344280 RBM19Q9Y4C8 960 aaKnown RBP29.1■■■□□ 2.25
CCDC38-201ENST00000344280 SPAG9O60271 1321 aaKnown RBP29.07■■■□□ 2.24
CCDC38-201ENST00000344280 ERICH6BQ5W0A0 696 aa29.06■■■□□ 2.24
CCDC38-201ENST00000344280 TESK2Q96S53 571 aa29.05■■■□□ 2.24
CCDC38-201ENST00000344280 PRDM15P57071 1507 aaPredicted RBP29.05■■■□□ 2.24
CCDC38-201ENST00000344280 MYBBP1AQ9BQG0 1328 aaKnown RBP29.05■■■□□ 2.24
CCDC38-201ENST00000344280 DISP3Q9P2K9 1392 aa29.04■■■□□ 2.24
CCDC38-201ENST00000344280 SMG6Q86US8 1419 aaKnown RBP29.04■■■□□ 2.24
CCDC38-201ENST00000344280 PPP4R2Q9NY27 417 aa29.04■■■□□ 2.24
CCDC38-201ENST00000344280 RALBP1Q15311 655 aa29.03■■■□□ 2.24
CCDC38-201ENST00000344280 ZFYVE16Q7Z3T8 1539 aa29.03■■■□□ 2.24
CCDC38-201ENST00000344280 LAMC1P11047 1609 aa29■■■□□ 2.23
CCDC38-201ENST00000344280 COL17A1Q9UMD9 1497 aaPredicted RBP29■■■□□ 2.23
CCDC38-201ENST00000344280 BRD4O60885 1362 aaPredicted RBP29■■■□□ 2.23
CCDC38-201ENST00000344280 PER1O15534 1290 aaPredicted RBP29■■■□□ 2.23
CCDC38-201ENST00000344280 LRPPRCP42704 1394 aaKnown RBP29■■■□□ 2.23
CCDC38-201ENST00000344280 NUDCQ9Y266 331 aa28.99■■■□□ 2.23
CCDC38-201ENST00000344280 WDR7Q9Y4E6 1490 aa28.98■■■□□ 2.23
CCDC38-201ENST00000344280 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
CCDC38-201ENST00000344280 KTN1Q86UP2 1357 aaKnown RBP28.98■■■□□ 2.23
CCDC38-201ENST00000344280 EIF2AK4Q9P2K8 1649 aaKnown RBP28.98■■■□□ 2.23
CCDC38-201ENST00000344280 ARAP3Q8WWN8 1544 aa28.98■■■□□ 2.23
CCDC38-201ENST00000344280 B4GALNT3Q6L9W6 998 aa28.96■■■□□ 2.23
CCDC38-201ENST00000344280 PARD3Q8TEW0 1356 aa28.95■■■□□ 2.23
CCDC38-201ENST00000344280 FANCAO15360 1455 aa28.94■■■□□ 2.22
CCDC38-201ENST00000344280 RNF17Q9BXT8 1623 aaKnown RBP28.9■■■□□ 2.22
CCDC38-201ENST00000344280 ABCA9Q8IUA7 1624 aa28.9■■■□□ 2.22
CCDC38-201ENST00000344280 PANK3Q9H999 370 aa28.9■■■□□ 2.22
CCDC38-201ENST00000344280 TRPM2O94759 1503 aa28.89■■■□□ 2.22
CCDC38-201ENST00000344280 NLRP13Q86W25 1043 aa28.89■■■□□ 2.22
CCDC38-201ENST00000344280 CC2D1BQ5T0F9 858 aaKnown RBP28.89■■■□□ 2.21
CCDC38-201ENST00000344280 ATP7AQ04656 1500 aa28.88■■■□□ 2.21
CCDC38-201ENST00000344280 DEPDC5O75140 1603 aa28.88■■■□□ 2.21
CCDC38-201ENST00000344280 TMF1P82094 1093 aa28.87■■■□□ 2.21
CCDC38-201ENST00000344280 PTPRTO14522 1441 aa28.87■■■□□ 2.21
CCDC38-201ENST00000344280 MADDQ8WXG6 1647 aa28.87■■■□□ 2.21
CCDC38-201ENST00000344280 RNF123Q5XPI4 1314 aa28.87■■■□□ 2.21
CCDC38-201ENST00000344280 INO80Q9ULG1 1556 aaPredicted RBP28.86■■■□□ 2.21
CCDC38-201ENST00000344280 SCAPERQ9BY12 1400 aa28.86■■■□□ 2.21
CCDC38-201ENST00000344280 CLTCL1P53675 1640 aa28.86■■■□□ 2.21
CCDC38-201ENST00000344280 SPHKAPQ2M3C7 1700 aa28.85■■■□□ 2.21
CCDC38-201ENST00000344280 KIF3BO15066 747 aa28.85■■■□□ 2.21
CCDC38-201ENST00000344280 MYT1LQ9UL68 1186 aa28.85■■■□□ 2.21
CCDC38-201ENST00000344280 ADGRL1O94910 1474 aa28.84■■■□□ 2.21
CCDC38-201ENST00000344280 CEP152O94986 1710 aa28.82■■■□□ 2.2
CCDC38-201ENST00000344280 ASXL2Q76L83 1435 aa28.82■■■□□ 2.2
CCDC38-201ENST00000344280 SALL2Q9Y467 1007 aaPredicted RBP28.81■■■□□ 2.2
CCDC38-201ENST00000344280 TET3O43151 1660 aa28.81■■■□□ 2.2
CCDC38-201ENST00000344280 VWDEQ8N2E2 1590 aa28.8■■■□□ 2.2
CCDC38-201ENST00000344280 WASHC2CQ9Y4E1 1318 aa28.78■■■□□ 2.2
CCDC38-201ENST00000344280 KANK1Q14678 1352 aa28.77■■■□□ 2.2
CCDC38-201ENST00000344280 IQGAP1P46940 1657 aa28.77■■■□□ 2.2
CCDC38-201ENST00000344280 MROH1Q8NDA8 1641 aa28.75■■■□□ 2.19
CCDC38-201ENST00000344280 ANP32EQ9BTT0 268 aa28.74■■■□□ 2.19
CCDC38-201ENST00000344280 UGGT1Q9NYU2 1555 aa28.74■■■□□ 2.19
CCDC38-201ENST00000344280 SCAF11Q99590 1463 aaKnown RBP28.71■■■□□ 2.19
CCDC38-201ENST00000344280 KIDINS220Q9ULH0 1771 aa28.68■■■□□ 2.18
CCDC38-201ENST00000344280 MSH5O43196 834 aa28.67■■■□□ 2.18
CCDC38-201ENST00000344280 STAC3Q96MF2 364 aa28.67■■■□□ 2.18
CCDC38-201ENST00000344280 CDCA7LQ96GN5 454 aa28.65■■■□□ 2.18
CCDC38-201ENST00000344280 CFAP70Q5T0N1 1121 aa28.63■■■□□ 2.17
CCDC38-201ENST00000344280 CCDC136Q96JN2 1154 aa28.63■■■□□ 2.17
CCDC38-201ENST00000344280 ADGRF5Q8IZF2 1346 aa28.63■■■□□ 2.17
CCDC38-201ENST00000344280 BLMP54132 1417 aaPredicted RBP28.62■■■□□ 2.17
CCDC38-201ENST00000344280 KNSTRNQ9Y448 316 aa28.62■■■□□ 2.17
CCDC38-201ENST00000344280 AMER1Q5JTC6 1135 aaPredicted RBP28.61■■■□□ 2.17
CCDC38-201ENST00000344280 EFCAB6Q5THR3 1501 aa28.61■■■□□ 2.17
CCDC38-201ENST00000344280 RRP1P56182 461 aaKnown RBP28.6■■■□□ 2.17
CCDC38-201ENST00000344280 FANCIQ9NVI1 1328 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms