RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 DHX29Q7Z478 1369 aaKnown RBP31.86■■■□□ 2.69
CACNB1-201ENST00000344140 TONSLQ96HA7 1378 aa31.86■■■□□ 2.69
CACNB1-201ENST00000344140 FAM135AQ9P2D6 1515 aa31.85■■■□□ 2.69
CACNB1-201ENST00000344140 COL17A1Q9UMD9 1497 aaPredicted RBP31.84■■■□□ 2.69
CACNB1-201ENST00000344140 FRMPD1Q5SYB0 1578 aa31.82■■■□□ 2.68
CACNB1-201ENST00000344140 IQGAP3Q86VI3 1631 aa31.8■■■□□ 2.68
CACNB1-201ENST00000344140 EIF2AK4Q9P2K8 1649 aaKnown RBP31.8■■■□□ 2.68
CACNB1-201ENST00000344140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.8■■■□□ 2.68
CACNB1-201ENST00000344140 A2MP01023 1474 aa31.77■■■□□ 2.68
CACNB1-201ENST00000344140 RPRD2Q5VT52 1461 aaKnown RBP31.76■■■□□ 2.67
CACNB1-201ENST00000344140 DEPDC5O75140 1603 aa31.75■■■□□ 2.67
CACNB1-201ENST00000344140 ZMYM4Q5VZL5 1548 aa31.74■■■□□ 2.67
CACNB1-201ENST00000344140 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
CACNB1-201ENST00000344140 KIF3BO15066 747 aa31.72■■■□□ 2.67
CACNB1-201ENST00000344140 KANK1Q14678 1352 aa31.7■■■□□ 2.66
CACNB1-201ENST00000344140 ABCA6Q8N139 1617 aa31.7■■■□□ 2.66
CACNB1-201ENST00000344140 ZNF316A6NFI3 1004 aaPredicted RBP31.65■■■□□ 2.66
CACNB1-201ENST00000344140 DIP2CQ9Y2E4 1556 aa31.65■■■□□ 2.66
CACNB1-201ENST00000344140 PRDM15P57071 1507 aaPredicted RBP31.65■■■□□ 2.66
CACNB1-201ENST00000344140 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.65
CACNB1-201ENST00000344140 RNF17Q9BXT8 1623 aaKnown RBP31.61■■■□□ 2.65
CACNB1-201ENST00000344140 BCORL1Q5H9F3 1711 aa31.61■■■□□ 2.65
CACNB1-201ENST00000344140 YEATS2Q9ULM3 1422 aa31.61■■■□□ 2.65
CACNB1-201ENST00000344140 MROH1Q8NDA8 1641 aa31.6■■■□□ 2.65
CACNB1-201ENST00000344140 L3MBTL2Q969R5 705 aa31.58■■■□□ 2.65
CACNB1-201ENST00000344140 ATP10AO60312 1499 aa31.57■■■□□ 2.64
CACNB1-201ENST00000344140 ARHGEF40Q8TER5 1519 aa31.57■■■□□ 2.64
CACNB1-201ENST00000344140 TET3O43151 1660 aa31.56■■■□□ 2.64
CACNB1-201ENST00000344140 PLA2R1Q13018 1463 aa31.53■■■□□ 2.64
CACNB1-201ENST00000344140 CCDC144AA2RUR9 1427 aa31.53■■■□□ 2.64
CACNB1-201ENST00000344140 LMTK2Q8IWU2 1503 aa31.51■■■□□ 2.64
CACNB1-201ENST00000344140 E9PCH4 1651 aa31.49■■■□□ 2.63
CACNB1-201ENST00000344140 GGT6Q6P531 493 aa31.46■■■□□ 2.63
CACNB1-201ENST00000344140 REREQ9P2R6 1566 aa31.46■■■□□ 2.63
CACNB1-201ENST00000344140 PTPRTO14522 1441 aa31.44■■■□□ 2.62
CACNB1-201ENST00000344140 EFCAB6Q5THR3 1501 aa31.43■■■□□ 2.62
CACNB1-201ENST00000344140 TRPM2O94759 1503 aa31.41■■■□□ 2.62
CACNB1-201ENST00000344140 WASHC2CQ9Y4E1 1318 aa31.39■■■□□ 2.62
CACNB1-201ENST00000344140 AGLP35573 1532 aa31.38■■■□□ 2.61
CACNB1-201ENST00000344140 SPHKAPQ2M3C7 1700 aa31.38■■■□□ 2.61
CACNB1-201ENST00000344140 ABCC3O15438 1527 aa31.38■■■□□ 2.61
CACNB1-201ENST00000344140 CEP152O94986 1710 aa31.37■■■□□ 2.61
CACNB1-201ENST00000344140 ARID4BQ4LE39 1312 aaPredicted RBP31.33■■■□□ 2.61
CACNB1-201ENST00000344140 ZC3H13Q5T200 1668 aaKnown RBP31.32■■■□□ 2.6
CACNB1-201ENST00000344140 SIGLEC1Q9BZZ2 1709 aa31.32■■■□□ 2.6
CACNB1-201ENST00000344140 NBPF8Q3BBV2 869 aa31.3■■■□□ 2.6
CACNB1-201ENST00000344140 PPP6R1Q9UPN7 881 aa31.3■■■□□ 2.6
CACNB1-201ENST00000344140 UHRF1BP1Q6BDS2 1440 aa31.3■■■□□ 2.6
CACNB1-201ENST00000344140 NPATQ14207 1427 aa31.29■■■□□ 2.6
CACNB1-201ENST00000344140 DIEXFQ68CQ4 756 aaKnown RBP31.28■■■□□ 2.6
CACNB1-201ENST00000344140 CAMSAP1Q5T5Y3 1602 aa31.27■■■□□ 2.6
CACNB1-201ENST00000344140 ARHGAP31Q2M1Z3 1444 aa31.26■■■□□ 2.59
CACNB1-201ENST00000344140 DCAF11Q8TEB1 546 aa31.26■■■□□ 2.59
CACNB1-201ENST00000344140 SPATA31E1Q6ZUB1 1445 aa31.25■■■□□ 2.59
CACNB1-201ENST00000344140 CLTCL1P53675 1640 aa31.24■■■□□ 2.59
CACNB1-201ENST00000344140 RGL3Q3MIN7 710 aa31.23■■■□□ 2.59
CACNB1-201ENST00000344140 MLECQ14165 292 aa31.22■■■□□ 2.59
CACNB1-201ENST00000344140 CNTLNQ9NXG0 1405 aa31.22■■■□□ 2.59
CACNB1-201ENST00000344140 NEURL4Q96JN8 1562 aa31.21■■■□□ 2.59
CACNB1-201ENST00000344140 KDM2AQ9Y2K7 1162 aa31.2■■■□□ 2.58
CACNB1-201ENST00000344140 ZNF326Q5BKZ1 582 aaKnown RBP31.18■■■□□ 2.58
CACNB1-201ENST00000344140 EIF4G2P78344 907 aaKnown RBP eCLIP31.16■■■□□ 2.582e-8■■■■■ 35.8
CACNB1-201ENST00000344140 STAC3Q96MF2 364 aa31.16■■■□□ 2.58
CACNB1-201ENST00000344140 NOS1P29475 1434 aa31.16■■■□□ 2.58
CACNB1-201ENST00000344140 RALGAPBQ86X10 1494 aa31.15■■■□□ 2.58
CACNB1-201ENST00000344140 PRAG1Q86YV5 1406 aa31.13■■■□□ 2.57
CACNB1-201ENST00000344140 UGGT1Q9NYU2 1555 aa31.11■■■□□ 2.57
CACNB1-201ENST00000344140 HSPA5P11021 654 aaKnown RBP31.1■■■□□ 2.57
CACNB1-201ENST00000344140 ESF1Q9H501 851 aaKnown RBP31.1■■■□□ 2.57
CACNB1-201ENST00000344140 KIF1BO60333 1816 aa31.09■■■□□ 2.57
CACNB1-201ENST00000344140 HIRIP3Q9BW71 556 aaPredicted RBP31.07■■■□□ 2.56
CACNB1-201ENST00000344140 CFAP65Q6ZU64 1925 aaKnown RBP31.06■■■□□ 2.56
CACNB1-201ENST00000344140 SYNMO15061 1565 aa31.04■■■□□ 2.56
CACNB1-201ENST00000344140 CLTCQ00610 1675 aaKnown RBP31.03■■■□□ 2.56
CACNB1-201ENST00000344140 ADGRB3O60242 1522 aa31.03■■■□□ 2.56
CACNB1-201ENST00000344140 SLC52A1Q9NWF4 448 aa31.03■■■□□ 2.56
CACNB1-201ENST00000344140 FER1L4A9Z1Z3 1794 aa31.02■■■□□ 2.56
CACNB1-201ENST00000344140 PIK3C2BO00750 1634 aa31.02■■■□□ 2.56
CACNB1-201ENST00000344140 PREX1Q8TCU6 1659 aa31.01■■■□□ 2.55
CACNB1-201ENST00000344140 TRPM1Q7Z4N2 1603 aa31■■■□□ 2.55
CACNB1-201ENST00000344140 CARD11Q9BXL7 1154 aa31■■■□□ 2.55
CACNB1-201ENST00000344140 ROCK2O75116 1388 aaKnown RBP31■■■□□ 2.55
CACNB1-201ENST00000344140 USP47Q96K76 1375 aa30.98■■■□□ 2.55
CACNB1-201ENST00000344140 ERVK-7P63135 1459 aa30.98■■■□□ 2.55
CACNB1-201ENST00000344140 ADAMTSL3P82987 1691 aa30.97■■■□□ 2.55
CACNB1-201ENST00000344140 MADDQ8WXG6 1647 aa30.96■■■□□ 2.55
CACNB1-201ENST00000344140 GPRASP1Q5JY77 1395 aa30.96■■■□□ 2.55
CACNB1-201ENST00000344140 MYOM2P54296 1465 aa30.96■■■□□ 2.55
CACNB1-201ENST00000344140 CHGAP10645 457 aaKnown RBP30.95■■■□□ 2.55
CACNB1-201ENST00000344140 MROH2AA6NES4 1674 aa30.95■■■□□ 2.55
CACNB1-201ENST00000344140 RPGRIP1LQ68CZ1 1315 aa30.94■■■□□ 2.54
CACNB1-201ENST00000344140 IDI1Q13907 227 aa30.93■■■□□ 2.54
CACNB1-201ENST00000344140 FBXO31Q5XUX0 539 aaPredicted RBP30.92■■■□□ 2.54
CACNB1-201ENST00000344140 RIMS1Q86UR5 1692 aaKnown RBP30.91■■■□□ 2.54
CACNB1-201ENST00000344140 ZMYM3Q14202 1370 aa30.91■■■□□ 2.54
CACNB1-201ENST00000344140 LAMC1P11047 1609 aa30.91■■■□□ 2.54
CACNB1-201ENST00000344140 SPATA31D1Q6ZQQ2 1576 aa30.9■■■□□ 2.54
CACNB1-201ENST00000344140 IFT172Q9UG01 1749 aa30.9■■■□□ 2.54
CACNB1-201ENST00000344140 NBPF1Q3BBV0 1214 aa30.87■■■□□ 2.53
CACNB1-201ENST00000344140 NRXN1Q9ULB1 1477 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms