RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 EXOC6Q8TAG9 804 aa28.22■■■□□ 2.11
E2F1-201ENST00000343380 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
E2F1-201ENST00000343380 RRP1P56182 461 aaKnown RBP28.21■■■□□ 2.11
E2F1-201ENST00000343380 TSPY4P0CV99 314 aa28.2■■■□□ 2.11
E2F1-201ENST00000343380 TSPY10P0CW01 314 aa28.2■■■□□ 2.11
E2F1-201ENST00000343380 ANP32AP39687 249 aaKnown RBP28.2■■■□□ 2.11
E2F1-201ENST00000343380 SHANK2Q9UPX8 1470 aa28.2■■■□□ 2.1
E2F1-201ENST00000343380 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
E2F1-201ENST00000343380 ATP10BO94823 1461 aa28.17■■■□□ 2.1
E2F1-201ENST00000343380 MAGI1Q96QZ7 1491 aaPredicted RBP28.17■■■□□ 2.1
E2F1-201ENST00000343380 PTPRGP23470 1445 aa28.17■■■□□ 2.1
E2F1-201ENST00000343380 CARMIL2Q6F5E8 1435 aa28.17■■■□□ 2.1
E2F1-201ENST00000343380 E9PCH4 1651 aa28.16■■■□□ 2.1
E2F1-201ENST00000343380 RCAN3Q9UKA8 241 aa28.16■■■□□ 2.1
E2F1-201ENST00000343380 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
E2F1-201ENST00000343380 KTN1Q86UP2 1357 aaKnown RBP28.15■■■□□ 2.1
E2F1-201ENST00000343380 NBPF1Q3BBV0 1214 aa28.14■■■□□ 2.1
E2F1-201ENST00000343380 CDCA7LQ96GN5 454 aa28.12■■■□□ 2.09
E2F1-201ENST00000343380 NLRP13Q86W25 1043 aa28.12■■■□□ 2.09
E2F1-201ENST00000343380 PARD3Q8TEW0 1356 aa28.11■■■□□ 2.09
E2F1-201ENST00000343380 ABCA8O94911 1581 aa28.11■■■□□ 2.09
E2F1-201ENST00000343380 PER1O15534 1290 aaPredicted RBP28.11■■■□□ 2.09
E2F1-201ENST00000343380 RGL3Q3MIN7 710 aa28.11■■■□□ 2.09
E2F1-201ENST00000343380 ZBTB47Q9UFB7 747 aaPredicted RBP28.11■■■□□ 2.09
E2F1-201ENST00000343380 NUP160Q12769 1436 aa28.08■■■□□ 2.09
E2F1-201ENST00000343380 PRAG1Q86YV5 1406 aa28.08■■■□□ 2.09
E2F1-201ENST00000343380 FAM135AQ9P2D6 1515 aa28.06■■■□□ 2.08
E2F1-201ENST00000343380 NPM2Q86SE8 214 aaKnown RBP28.05■■■□□ 2.08
E2F1-201ENST00000343380 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
E2F1-201ENST00000343380 TRPM1Q7Z4N2 1603 aa28.03■■■□□ 2.08
E2F1-201ENST00000343380 PLIN1O60240 522 aa28.02■■■□□ 2.08
E2F1-201ENST00000343380 CCDC144AA2RUR9 1427 aa28.01■■■□□ 2.07
E2F1-201ENST00000343380 PLA2R1Q13018 1463 aa28■■■□□ 2.07
E2F1-201ENST00000343380 DISP3Q9P2K9 1392 aa28■■■□□ 2.07
E2F1-201ENST00000343380 ARHGEF5Q12774 1597 aa28■■■□□ 2.07
E2F1-201ENST00000343380 PDE4AP27815 886 aa27.99■■■□□ 2.07
E2F1-201ENST00000343380 TCERG1O14776 1098 aaKnown RBP27.99■■■□□ 2.07
E2F1-201ENST00000343380 PDE3BQ13370 1112 aa27.99■■■□□ 2.07
E2F1-201ENST00000343380 TESK2Q96S53 571 aa27.99■■■□□ 2.07
E2F1-201ENST00000343380 SKAP1Q86WV1 359 aa27.98■■■□□ 2.07
E2F1-201ENST00000343380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.97■■■□□ 2.071e-6■■■□□ 16.1
E2F1-201ENST00000343380 SAMD9LQ8IVG5 1584 aa27.97■■■□□ 2.07
E2F1-201ENST00000343380 CCDC141Q6ZP82 1450 aa27.96■■■□□ 2.07
E2F1-201ENST00000343380 A2MP01023 1474 aa27.96■■■□□ 2.07
E2F1-201ENST00000343380 PANK3Q9H999 370 aa27.95■■■□□ 2.07
E2F1-201ENST00000343380 GPRASP1Q5JY77 1395 aa27.94■■■□□ 2.06
E2F1-201ENST00000343380 BACH2Q9BYV9 841 aa27.94■■■□□ 2.06
E2F1-201ENST00000343380 COL17A1Q9UMD9 1497 aaPredicted RBP27.93■■■□□ 2.06
E2F1-201ENST00000343380 CDC42BPBQ9Y5S2 1711 aa27.9■■■□□ 2.06
E2F1-201ENST00000343380 RTL5Q5HYW3 569 aaPredicted RBP27.9■■■□□ 2.06
E2F1-201ENST00000343380 CRBNQ96SW2 442 aa27.89■■■□□ 2.06
E2F1-201ENST00000343380 BLMP54132 1417 aaPredicted RBP27.89■■■□□ 2.05
E2F1-201ENST00000343380 PRDM15P57071 1507 aaPredicted RBP27.86■■■□□ 2.05
E2F1-201ENST00000343380 ERBINQ96RT1 1412 aa27.86■■■□□ 2.05
E2F1-201ENST00000343380 MS4A1P11836 297 aa27.85■■■□□ 2.05
E2F1-201ENST00000343380 LAS1LQ9Y4W2 734 aaKnown RBP27.85■■■□□ 2.05
E2F1-201ENST00000343380 SYCP2Q9BX26 1530 aa27.85■■■□□ 2.05
E2F1-201ENST00000343380 C20orf194Q5TEA3 1177 aa27.85■■■□□ 2.05
E2F1-201ENST00000343380 WASHC2CQ9Y4E1 1318 aa27.85■■■□□ 2.05
E2F1-201ENST00000343380 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
E2F1-201ENST00000343380 ADAMTS8Q9UP79 889 aa27.82■■■□□ 2.04
E2F1-201ENST00000343380 RSPH4AQ5TD94 716 aa27.81■■■□□ 2.04
E2F1-201ENST00000343380 PLEKHH2Q8IVE3 1493 aa27.81■■■□□ 2.04
E2F1-201ENST00000343380 UNC13BO14795 1591 aa27.8■■■□□ 2.04
E2F1-201ENST00000343380 TMF1P82094 1093 aa27.79■■■□□ 2.04
E2F1-201ENST00000343380 CHD1O14646 1710 aa27.79■■■□□ 2.04
E2F1-201ENST00000343380 LAMC1P11047 1609 aa27.77■■■□□ 2.04
E2F1-201ENST00000343380 INSRP06213 1382 aa27.77■■■□□ 2.04
E2F1-201ENST00000343380 MYO5CQ9NQX4 1742 aa27.76■■■□□ 2.03
E2F1-201ENST00000343380 ZMYM4Q5VZL5 1548 aa27.75■■■□□ 2.03
E2F1-201ENST00000343380 ARHGAP5Q13017 1502 aa27.75■■■□□ 2.03
E2F1-201ENST00000343380 TTC37Q6PGP7 1564 aa27.74■■■□□ 2.03
E2F1-201ENST00000343380 NEFMP07197 916 aa27.73■■■□□ 2.03
E2F1-201ENST00000343380 MAGI2Q86UL8 1455 aa27.73■■■□□ 2.03
E2F1-201ENST00000343380 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
E2F1-201ENST00000343380 IQGAP3Q86VI3 1631 aa27.71■■■□□ 2.03
E2F1-201ENST00000343380 MAST1Q9Y2H9 1570 aa27.7■■■□□ 2.03
E2F1-201ENST00000343380 WDR7Q9Y4E6 1490 aa27.69■■■□□ 2.02
E2F1-201ENST00000343380 PPP2R1AP30153 589 aa27.69■■■□□ 2.02
E2F1-201ENST00000343380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.69■■■□□ 2.02
E2F1-201ENST00000343380 EIF2AK4Q9P2K8 1649 aaKnown RBP27.68■■■□□ 2.02
E2F1-201ENST00000343380 KDM2BQ8NHM5 1336 aa27.68■■■□□ 2.02
E2F1-201ENST00000343380 DUSP27Q5VZP5 1158 aa27.68■■■□□ 2.02
E2F1-201ENST00000343380 ATP10AO60312 1499 aa27.66■■■□□ 2.02
E2F1-201ENST00000343380 AMER1Q5JTC6 1135 aaPredicted RBP27.65■■■□□ 2.02
E2F1-201ENST00000343380 KNSTRNQ9Y448 316 aa27.64■■■□□ 2.02
E2F1-201ENST00000343380 PLXNC1O60486 1568 aa27.62■■■□□ 2.01
E2F1-201ENST00000343380 RNF17Q9BXT8 1623 aaKnown RBP27.62■■■□□ 2.01
E2F1-201ENST00000343380 ZNF521Q96K83 1311 aa27.62■■■□□ 2.01
E2F1-201ENST00000343380 WDR43Q15061 677 aaKnown RBP eCLIP27.62■■■□□ 2.01
E2F1-201ENST00000343380 SLC4A3P48751 1232 aa27.61■■■□□ 2.01
E2F1-201ENST00000343380 DUOX2Q9NRD8 1548 aa27.59■■■□□ 2.01
E2F1-201ENST00000343380 IL27Q8NEV9 243 aa27.59■■■□□ 2.01
E2F1-201ENST00000343380 USP35Q9P2H5 1018 aa27.59■■■□□ 2.01
E2F1-201ENST00000343380 GOLGA2Q08379 1002 aa27.57■■■□□ 2
E2F1-201ENST00000343380 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
E2F1-201ENST00000343380 CENPQQ7L2Z9 268 aaPredicted RBP27.56■■■□□ 2
E2F1-201ENST00000343380 CCDC146Q8IYE0 955 aa27.56■■■□□ 2
E2F1-201ENST00000343380 SPINK5Q9NQ38 1064 aaPredicted RBP27.55■■■□□ 2
E2F1-201ENST00000343380 MADDQ8WXG6 1647 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms