RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 CHMP4AQ9BY43 222 aa20.51■□□□□ 0.87
CDC42BPG-201ENST00000342711 RASSF8Q8NHQ8 419 aa20.51■□□□□ 0.87
CDC42BPG-201ENST00000342711 FMN1Q68DA7 1419 aa20.5■□□□□ 0.87
CDC42BPG-201ENST00000342711 A0A0U1RQG5 324 aaPredicted RBP20.5■□□□□ 0.87
CDC42BPG-201ENST00000342711 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
CDC42BPG-201ENST00000342711 TERF2IPQ9NYB0 399 aa20.5■□□□□ 0.87
CDC42BPG-201ENST00000342711 PDE4CQ08493 712 aa20.49■□□□□ 0.87
CDC42BPG-201ENST00000342711 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
CDC42BPG-201ENST00000342711 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
CDC42BPG-201ENST00000342711 PDE4AP27815 886 aa20.48■□□□□ 0.87
CDC42BPG-201ENST00000342711 HDAC5Q9UQL6 1122 aa20.48■□□□□ 0.87
CDC42BPG-201ENST00000342711 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
CDC42BPG-201ENST00000342711 HSP90AA2PQ14568 343 aaPredicted RBP20.48■□□□□ 0.87
CDC42BPG-201ENST00000342711 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
CDC42BPG-201ENST00000342711 ATAD2BQ9ULI0 1458 aa20.47■□□□□ 0.87
CDC42BPG-201ENST00000342711 CENPQQ7L2Z9 268 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPG-201ENST00000342711 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
CDC42BPG-201ENST00000342711 PLIN1O60240 522 aa20.46■□□□□ 0.87
CDC42BPG-201ENST00000342711 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
CDC42BPG-201ENST00000342711 LMOD3Q0VAK6 560 aa20.45■□□□□ 0.86
CDC42BPG-201ENST00000342711 KIF15Q9NS87 1388 aa20.45■□□□□ 0.86
CDC42BPG-201ENST00000342711 SF3A1Q15459 793 aaKnown RBP20.45■□□□□ 0.86
CDC42BPG-201ENST00000342711 DDX49Q9Y6V7 483 aaKnown RBP20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 MYBBP1AQ9BQG0 1328 aaKnown RBP20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 GSE1Q14687 1217 aa20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 PHLDB1Q86UU1 1377 aa20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 TPM3P06753 285 aa20.44■□□□□ 0.86
CDC42BPG-201ENST00000342711 TOMM22Q9NS69 142 aa20.43■□□□□ 0.86
CDC42BPG-201ENST00000342711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDC42BPG-201ENST00000342711 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
CDC42BPG-201ENST00000342711 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 RSPH6AQ9H0K4 717 aa20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 RILPL2Q969X0 211 aa20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 ANKRD45Q5TZF3 282 aa20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
CDC42BPG-201ENST00000342711 CARMIL2Q6F5E8 1435 aa20.41■□□□□ 0.86
CDC42BPG-201ENST00000342711 KIF3BO15066 747 aa20.41■□□□□ 0.86
CDC42BPG-201ENST00000342711 EFCAB2Q5VUJ9 269 aa20.41■□□□□ 0.86
CDC42BPG-201ENST00000342711 HNRNPMP52272 730 aaKnown RBP eCLIP20.4■□□□□ 0.86
CDC42BPG-201ENST00000342711 H3BQV1 296 aa20.4■□□□□ 0.86
CDC42BPG-201ENST00000342711 IFFO2Q5TF58 517 aa20.4■□□□□ 0.86
CDC42BPG-201ENST00000342711 KIF3AQ9Y496 699 aa20.4■□□□□ 0.86
CDC42BPG-201ENST00000342711 CRBNQ96SW2 442 aa20.4■□□□□ 0.86
CDC42BPG-201ENST00000342711 RRP1P56182 461 aaKnown RBP20.39■□□□□ 0.85
CDC42BPG-201ENST00000342711 AMPHP49418 695 aa20.39■□□□□ 0.85
CDC42BPG-201ENST00000342711 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
CDC42BPG-201ENST00000342711 PANK3Q9H999 370 aa20.39■□□□□ 0.85
CDC42BPG-201ENST00000342711 SKOR2Q2VWA4 1001 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPG-201ENST00000342711 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
CDC42BPG-201ENST00000342711 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
CDC42BPG-201ENST00000342711 PES1O00541 588 aaKnown RBP20.37■□□□□ 0.85
CDC42BPG-201ENST00000342711 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
CDC42BPG-201ENST00000342711 CCDC9Q9Y3X0 531 aaKnown RBP20.36■□□□□ 0.85
CDC42BPG-201ENST00000342711 ST20-MTHFSA0A0A6YYL1 179 aa20.36■□□□□ 0.85
CDC42BPG-201ENST00000342711 GOLGA6L19H0YKK7 550 aa20.35■□□□□ 0.85
CDC42BPG-201ENST00000342711 FAM184AQ8NB25 1140 aa20.35■□□□□ 0.85
CDC42BPG-201ENST00000342711 TRAK1Q9UPV9 953 aa20.35■□□□□ 0.85
CDC42BPG-201ENST00000342711 ZKSCAN2Q63HK3 967 aa20.35■□□□□ 0.85
CDC42BPG-201ENST00000342711 TPD52L1Q16890 204 aaPredicted RBP20.34■□□□□ 0.85
CDC42BPG-201ENST00000342711 CCAR2Q8N163 923 aaKnown RBP20.34■□□□□ 0.85
CDC42BPG-201ENST00000342711 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
CDC42BPG-201ENST00000342711 E9PSI1 815 aa20.33■□□□□ 0.84
CDC42BPG-201ENST00000342711 ATP6V1DQ9Y5K8 247 aa20.33■□□□□ 0.84
CDC42BPG-201ENST00000342711 MARCH6O60337 910 aa20.33■□□□□ 0.84
CDC42BPG-201ENST00000342711 BECN2A8MW95 431 aa20.32■□□□□ 0.84
CDC42BPG-201ENST00000342711 CEP89Q96ST8 783 aa20.32■□□□□ 0.84
CDC42BPG-201ENST00000342711 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
CDC42BPG-201ENST00000342711 PRM3Q9NNZ6 103 aa20.32■□□□□ 0.84
CDC42BPG-201ENST00000342711 FRAT2O75474 233 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPG-201ENST00000342711 PRKRIP1Q9H875 184 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPG-201ENST00000342711 ZBED9Q6R2W3 1325 aa20.31■□□□□ 0.84
CDC42BPG-201ENST00000342711 VPS53Q5VIR6 699 aa20.3■□□□□ 0.84
CDC42BPG-201ENST00000342711 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
CDC42BPG-201ENST00000342711 ZNF592Q92610 1267 aa20.29■□□□□ 0.84
CDC42BPG-201ENST00000342711 TSR1Q2NL82 804 aaKnown RBP20.29■□□□□ 0.84
CDC42BPG-201ENST00000342711 G3V3G9 751 aa20.28■□□□□ 0.84
CDC42BPG-201ENST00000342711 DCAF8Q5TAQ9 597 aa20.28■□□□□ 0.84
CDC42BPG-201ENST00000342711 MCTP1Q6DN14 999 aa20.28■□□□□ 0.84
CDC42BPG-201ENST00000342711 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
CDC42BPG-201ENST00000342711 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
CDC42BPG-201ENST00000342711 FHOD3Q2V2M9 1422 aa20.27■□□□□ 0.84
CDC42BPG-201ENST00000342711 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.83
CDC42BPG-201ENST00000342711 CGNL1Q0VF96 1302 aa20.27■□□□□ 0.83
CDC42BPG-201ENST00000342711 FANCIQ9NVI1 1328 aa20.26■□□□□ 0.83
CDC42BPG-201ENST00000342711 ANO8Q9HCE9 1232 aaPredicted RBP20.26■□□□□ 0.83
CDC42BPG-201ENST00000342711 DIAPH3Q9NSV4 1193 aa20.26■□□□□ 0.83
CDC42BPG-201ENST00000342711 SETQ01105 290 aaPredicted RBP20.25■□□□□ 0.83
CDC42BPG-201ENST00000342711 EID1Q9Y6B2 187 aa20.25■□□□□ 0.83
CDC42BPG-201ENST00000342711 RAPGEF2Q9Y4G8 1499 aa20.24■□□□□ 0.83
CDC42BPG-201ENST00000342711 TPM1P09493 284 aa20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 AKAP17AQ02040 695 aaKnown RBP20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 ZNF771Q7L3S4 317 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 APAF1O14727 1248 aa20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 GTF2E1P29083 439 aaPredicted RBP20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 CHMP4CQ96CF2 233 aa20.23■□□□□ 0.83
CDC42BPG-201ENST00000342711 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
CDC42BPG-201ENST00000342711 CCDC18Q5T9S5 1454 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms