RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 EIF2AK4Q9P2K8 1649 aaKnown RBP28.35■■■□□ 2.13
RTN1-202ENST00000342503 KDM5CP41229 1560 aa28.34■■■□□ 2.13
RTN1-202ENST00000342503 NEO1Q92859 1461 aa28.34■■■□□ 2.13
RTN1-202ENST00000342503 GLI2P10070 1586 aa28.34■■■□□ 2.13
RTN1-202ENST00000342503 DHX29Q7Z478 1369 aaKnown RBP28.32■■■□□ 2.12
RTN1-202ENST00000342503 PLA2R1Q13018 1463 aa28.32■■■□□ 2.12
RTN1-202ENST00000342503 HSPA5P11021 654 aaKnown RBP28.29■■■□□ 2.12
RTN1-202ENST00000342503 CCDC144AA2RUR9 1427 aa28.29■■■□□ 2.12
RTN1-202ENST00000342503 DDX10Q13206 875 aaKnown RBP28.28■■■□□ 2.12
RTN1-202ENST00000342503 HECW2Q9P2P5 1572 aa28.28■■■□□ 2.12
RTN1-202ENST00000342503 E9PCH4 1651 aa28.28■■■□□ 2.12
RTN1-202ENST00000342503 EIF4G2P78344 907 aaKnown RBP eCLIP28.27■■■□□ 2.12
RTN1-202ENST00000342503 MLH3Q9UHC1 1453 aa28.27■■■□□ 2.12
RTN1-202ENST00000342503 VWDEQ8N2E2 1590 aa28.25■■■□□ 2.11
RTN1-202ENST00000342503 ATP10AO60312 1499 aa28.25■■■□□ 2.11
RTN1-202ENST00000342503 TET3O43151 1660 aa28.24■■■□□ 2.11
RTN1-202ENST00000342503 MROH1Q8NDA8 1641 aa28.24■■■□□ 2.11
RTN1-202ENST00000342503 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
RTN1-202ENST00000342503 UHRF1BP1Q6BDS2 1440 aa28.24■■■□□ 2.11
RTN1-202ENST00000342503 KIF3BO15066 747 aa28.23■■■□□ 2.11
RTN1-202ENST00000342503 PRDM15P57071 1507 aaPredicted RBP28.22■■■□□ 2.11
RTN1-202ENST00000342503 A2MP01023 1474 aa28.22■■■□□ 2.11
RTN1-202ENST00000342503 KANK1Q14678 1352 aa28.21■■■□□ 2.11
RTN1-202ENST00000342503 RICTORQ6R327 1708 aa28.2■■■□□ 2.11
RTN1-202ENST00000342503 ZNF326Q5BKZ1 582 aaKnown RBP28.2■■■□□ 2.1
RTN1-202ENST00000342503 ABCA6Q8N139 1617 aa28.2■■■□□ 2.1
RTN1-202ENST00000342503 SPHKAPQ2M3C7 1700 aa28.17■■■□□ 2.1
RTN1-202ENST00000342503 FRMPD1Q5SYB0 1578 aa28.17■■■□□ 2.1
RTN1-202ENST00000342503 FAM69CQ0P6D2 419 aa28.17■■■□□ 2.1
RTN1-202ENST00000342503 RNF17Q9BXT8 1623 aaKnown RBP28.17■■■□□ 2.1
RTN1-202ENST00000342503 RAPGEF3O95398 923 aa28.16■■■□□ 2.1
RTN1-202ENST00000342503 DCAF11Q8TEB1 546 aa28.16■■■□□ 2.1
RTN1-202ENST00000342503 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
RTN1-202ENST00000342503 SPATA31E1Q6ZUB1 1445 aa28.15■■■□□ 2.1
RTN1-202ENST00000342503 KDM2AQ9Y2K7 1162 aa28.15■■■□□ 2.1
RTN1-202ENST00000342503 TRPM2O94759 1503 aa28.14■■■□□ 2.09
RTN1-202ENST00000342503 TSPOAP1O95153 1857 aa28.13■■■□□ 2.09
RTN1-202ENST00000342503 BCORL1Q5H9F3 1711 aa28.12■■■□□ 2.09
RTN1-202ENST00000342503 PPRC1Q5VV67 1664 aaKnown RBP28.11■■■□□ 2.09
RTN1-202ENST00000342503 PTPRTO14522 1441 aa28.11■■■□□ 2.09
RTN1-202ENST00000342503 CEP152O94986 1710 aa28.1■■■□□ 2.09
RTN1-202ENST00000342503 DIP2CQ9Y2E4 1556 aa28.1■■■□□ 2.09
RTN1-202ENST00000342503 WASHC2AQ641Q2 1341 aa28.09■■■□□ 2.09
RTN1-202ENST00000342503 RGL3Q3MIN7 710 aa28.09■■■□□ 2.09
RTN1-202ENST00000342503 POLR1AO95602 1720 aaPredicted RBP28.09■■■□□ 2.09
RTN1-202ENST00000342503 CLTCL1P53675 1640 aa28.07■■■□□ 2.08
RTN1-202ENST00000342503 LMTK2Q8IWU2 1503 aa28.07■■■□□ 2.08
RTN1-202ENST00000342503 YTHDC1Q96MU7 727 aaKnown RBP28.06■■■□□ 2.08
RTN1-202ENST00000342503 EFCAB6Q5THR3 1501 aa28.06■■■□□ 2.08
RTN1-202ENST00000342503 TRPM1Q7Z4N2 1603 aa28.05■■■□□ 2.08
RTN1-202ENST00000342503 PRAG1Q86YV5 1406 aa28.05■■■□□ 2.08
RTN1-202ENST00000342503 USP47Q96K76 1375 aa28.05■■■□□ 2.08
RTN1-202ENST00000342503 C11orf95C9JLR9 678 aaPredicted RBP28.03■■■□□ 2.08
RTN1-202ENST00000342503 CENPBP07199 599 aaPredicted RBP28.02■■■□□ 2.08
RTN1-202ENST00000342503 KIF13AQ9H1H9 1805 aa28.02■■■□□ 2.08
RTN1-202ENST00000342503 CCDC7Q96M83 1385 aa28.01■■■□□ 2.07
RTN1-202ENST00000342503 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
RTN1-202ENST00000342503 ZMYM4Q5VZL5 1548 aa27.98■■■□□ 2.07
RTN1-202ENST00000342503 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
RTN1-202ENST00000342503 GGT6Q6P531 493 aa27.97■■■□□ 2.07
RTN1-202ENST00000342503 ROCK2O75116 1388 aaKnown RBP27.95■■■□□ 2.06
RTN1-202ENST00000342503 ANP32CO43423 234 aa27.95■■■□□ 2.06
RTN1-202ENST00000342503 ABCC3O15438 1527 aa27.93■■■□□ 2.06
RTN1-202ENST00000342503 KIF7Q2M1P5 1343 aa27.92■■■□□ 2.06
RTN1-202ENST00000342503 KIF1BO60333 1816 aa27.92■■■□□ 2.06
RTN1-202ENST00000342503 CNTLNQ9NXG0 1405 aa27.91■■■□□ 2.06
RTN1-202ENST00000342503 NEURL4Q96JN8 1562 aa27.91■■■□□ 2.06
RTN1-202ENST00000342503 UGGT1Q9NYU2 1555 aa27.91■■■□□ 2.06
RTN1-202ENST00000342503 LAMC1P11047 1609 aa27.91■■■□□ 2.06
RTN1-202ENST00000342503 CAMSAP1Q5T5Y3 1602 aa27.91■■■□□ 2.06
RTN1-202ENST00000342503 MADDQ8WXG6 1647 aa27.89■■■□□ 2.06
RTN1-202ENST00000342503 CFAP65Q6ZU64 1925 aaKnown RBP27.89■■■□□ 2.05
RTN1-202ENST00000342503 NPATQ14207 1427 aa27.87■■■□□ 2.05
RTN1-202ENST00000342503 GPRASP1Q5JY77 1395 aa27.87■■■□□ 2.05
RTN1-202ENST00000342503 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
RTN1-202ENST00000342503 NBPF1Q3BBV0 1214 aa27.87■■■□□ 2.05
RTN1-202ENST00000342503 ZC3H13Q5T200 1668 aaKnown RBP27.86■■■□□ 2.05
RTN1-202ENST00000342503 MROH2AA6NES4 1674 aa27.84■■■□□ 2.05
RTN1-202ENST00000342503 ST20-MTHFSA0A0A6YYL1 179 aa27.83■■■□□ 2.05
RTN1-202ENST00000342503 CCER2I3L3R5 266 aa27.83■■■□□ 2.05
RTN1-202ENST00000342503 STAC3Q96MF2 364 aa27.81■■■□□ 2.04
RTN1-202ENST00000342503 SIGLEC1Q9BZZ2 1709 aa27.81■■■□□ 2.04
RTN1-202ENST00000342503 ARID4BQ4LE39 1312 aaPredicted RBP27.8■■■□□ 2.04
RTN1-202ENST00000342503 IFT172Q9UG01 1749 aa27.8■■■□□ 2.04
RTN1-202ENST00000342503 REREQ9P2R6 1566 aa27.79■■■□□ 2.04
RTN1-202ENST00000342503 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
RTN1-202ENST00000342503 COL17A1Q9UMD9 1497 aaPredicted RBP27.75■■■□□ 2.03
RTN1-202ENST00000342503 KIAA1210Q9ULL0 1709 aa27.74■■■□□ 2.03
RTN1-202ENST00000342503 NOS1P29475 1434 aa27.74■■■□□ 2.03
RTN1-202ENST00000342503 ARHGAP31Q2M1Z3 1444 aa27.74■■■□□ 2.03
RTN1-202ENST00000342503 MYOM2P54296 1465 aa27.74■■■□□ 2.03
RTN1-202ENST00000342503 POLR3GLQ9BT43 218 aa27.73■■■□□ 2.03
RTN1-202ENST00000342503 SENP3Q9H4L4 574 aaPredicted RBP27.72■■■□□ 2.03
RTN1-202ENST00000342503 AGLP35573 1532 aa27.72■■■□□ 2.03
RTN1-202ENST00000342503 SYNMO15061 1565 aa27.72■■■□□ 2.03
RTN1-202ENST00000342503 IQGAP1P46940 1657 aa27.71■■■□□ 2.03
RTN1-202ENST00000342503 PIK3C2BO00750 1634 aa27.7■■■□□ 2.03
RTN1-202ENST00000342503 ARHGEF40Q8TER5 1519 aa27.68■■■□□ 2.02
RTN1-202ENST00000342503 PPLO60437 1756 aa27.68■■■□□ 2.02
RTN1-202ENST00000342503 CHGAP10645 457 aaKnown RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms