RNA–Protein interactions for RNA: ENST00000342085.8

PDPK1-202, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPK1, Length 7,241 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-202ENST00000342085 PCMTD1Q96MG8 357 aaPredicted RBP17.97■□□□□ 0.47
PDPK1-202ENST00000342085 PATL2C9JE40 543 aaKnown RBP17.97■□□□□ 0.47
PDPK1-202ENST00000342085 SMC4Q9NTJ3 1288 aa17.96■□□□□ 0.47
PDPK1-202ENST00000342085 H3BQV1 296 aa17.96■□□□□ 0.47
PDPK1-202ENST00000342085 IFFO2Q5TF58 517 aa17.96■□□□□ 0.47
PDPK1-202ENST00000342085 SYAP1Q96A49 352 aaPredicted RBP17.95■□□□□ 0.46
PDPK1-202ENST00000342085 PSME1Q06323 249 aa17.95■□□□□ 0.46
PDPK1-202ENST00000342085 KIF16BQ96L93 1317 aa17.95■□□□□ 0.46
PDPK1-202ENST00000342085 WWC2Q6AWC2 1192 aa17.95■□□□□ 0.46
PDPK1-202ENST00000342085 EFCAB2Q5VUJ9 269 aa17.94■□□□□ 0.46
PDPK1-202ENST00000342085 TEFQ10587 303 aa17.94■□□□□ 0.46
PDPK1-202ENST00000342085 IKQ13123 557 aaPredicted RBP17.94■□□□□ 0.46
PDPK1-202ENST00000342085 KIF3AQ9Y496 699 aa17.93■□□□□ 0.46
PDPK1-202ENST00000342085 FYB1O15117 783 aa17.93■□□□□ 0.46
PDPK1-202ENST00000342085 KIF27Q86VH2 1401 aa17.93■□□□□ 0.46
PDPK1-202ENST00000342085 ATF3P18847 181 aa17.92■□□□□ 0.46
PDPK1-202ENST00000342085 FAM184AQ8NB25 1140 aa17.92■□□□□ 0.46
PDPK1-202ENST00000342085 GBP4Q96PP9 640 aa17.92■□□□□ 0.46
PDPK1-202ENST00000342085 CSPP1Q1MSJ5 1256 aa17.92■□□□□ 0.46
PDPK1-202ENST00000342085 EIF2S2P20042 333 aaKnown RBP17.92■□□□□ 0.46
PDPK1-202ENST00000342085 GZF1Q9H116 711 aaPredicted RBP17.92■□□□□ 0.46
PDPK1-202ENST00000342085 FOXD4L5Q5VV16 416 aaPredicted RBP17.92■□□□□ 0.46
PDPK1-202ENST00000342085 FOXD4L4Q8WXT5 416 aaPredicted RBP17.92■□□□□ 0.46
PDPK1-202ENST00000342085 VSIG10Q8N0Z9 540 aa17.91■□□□□ 0.46
PDPK1-202ENST00000342085 RWDD1Q9H446 243 aaPredicted RBP17.91■□□□□ 0.46
PDPK1-202ENST00000342085 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
PDPK1-202ENST00000342085 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
PDPK1-202ENST00000342085 PKD2Q13563 968 aa17.91■□□□□ 0.46
PDPK1-202ENST00000342085 NEXNQ0ZGT2 675 aa17.9■□□□□ 0.46
PDPK1-202ENST00000342085 ODF2Q5BJF6 829 aa17.9■□□□□ 0.46
PDPK1-202ENST00000342085 ROCK2O75116 1388 aaKnown RBP17.9■□□□□ 0.46
PDPK1-202ENST00000342085 LMOD3Q0VAK6 560 aa17.9■□□□□ 0.46
PDPK1-202ENST00000342085 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
PDPK1-202ENST00000342085 RILPL2Q969X0 211 aa17.9■□□□□ 0.46
PDPK1-202ENST00000342085 KTN1Q86UP2 1357 aaKnown RBP17.89■□□□□ 0.46
PDPK1-202ENST00000342085 PPP4R2Q9NY27 417 aa17.89■□□□□ 0.45
PDPK1-202ENST00000342085 MTMR7Q9Y216 660 aa17.89■□□□□ 0.45
PDPK1-202ENST00000342085 CT47A1Q5JQC4 288 aaPredicted RBP17.88■□□□□ 0.45
PDPK1-202ENST00000342085 CARMIL2Q6F5E8 1435 aa17.88■□□□□ 0.45
PDPK1-202ENST00000342085 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
PDPK1-202ENST00000342085 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
PDPK1-202ENST00000342085 TRIM29Q14134 588 aa17.87■□□□□ 0.45
PDPK1-202ENST00000342085 CCAR2Q8N163 923 aaKnown RBP17.87■□□□□ 0.45
PDPK1-202ENST00000342085 CCDC47Q96A33 483 aaKnown RBP17.87■□□□□ 0.45
PDPK1-202ENST00000342085 CCDC27Q2M243 656 aa17.87■□□□□ 0.45
PDPK1-202ENST00000342085 WASHC2AQ641Q2 1341 aa17.86■□□□□ 0.45
PDPK1-202ENST00000342085 ZFYVE27Q5T4F4 411 aa17.86■□□□□ 0.45
PDPK1-202ENST00000342085 LRRFIP1Q32MZ4 808 aaKnown RBP17.86■□□□□ 0.45
PDPK1-202ENST00000342085 EIF3AQ14152 1382 aaKnown RBP17.86■□□□□ 0.45
PDPK1-202ENST00000342085 NECTIN2Q92692 538 aa17.86■□□□□ 0.45
PDPK1-202ENST00000342085 PPM1FP49593 454 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 TNNT3P45378 269 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 C9orf78Q9NZ63 289 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.85■□□□□ 0.45
PDPK1-202ENST00000342085 TPM1P09493 284 aa17.85■□□□□ 0.45
PDPK1-202ENST00000342085 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
PDPK1-202ENST00000342085 CCDC146Q8IYE0 955 aa17.85■□□□□ 0.45
PDPK1-202ENST00000342085 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
PDPK1-202ENST00000342085 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
PDPK1-202ENST00000342085 NOP58Q9Y2X3 529 aaKnown RBP17.84■□□□□ 0.45
PDPK1-202ENST00000342085 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
PDPK1-202ENST00000342085 PAXIP1Q6ZW49 1069 aaPredicted RBP17.84■□□□□ 0.45
PDPK1-202ENST00000342085 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
PDPK1-202ENST00000342085 FAM177BA6PVY3 158 aa17.83■□□□□ 0.45
PDPK1-202ENST00000342085 COG3Q96JB2 828 aa17.83■□□□□ 0.45
PDPK1-202ENST00000342085 ERICH2A1L162 156 aa17.83■□□□□ 0.44
PDPK1-202ENST00000342085 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
PDPK1-202ENST00000342085 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
PDPK1-202ENST00000342085 CPLX2Q6PUV4 134 aaKnown RBP17.82■□□□□ 0.44
PDPK1-202ENST00000342085 RB1CC1Q8TDY2 1594 aa17.82■□□□□ 0.44
PDPK1-202ENST00000342085 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDPK1-202ENST00000342085 PTMSP20962 102 aa17.81■□□□□ 0.44
PDPK1-202ENST00000342085 PIP4K2BP78356 416 aa17.81■□□□□ 0.44
PDPK1-202ENST00000342085 PLIN1O60240 522 aa17.8■□□□□ 0.44
PDPK1-202ENST00000342085 FOXD4L6Q3SYB3 417 aaPredicted RBP17.79■□□□□ 0.44
PDPK1-202ENST00000342085 FOXD4L3Q6VB84 417 aaPredicted RBP17.79■□□□□ 0.44
PDPK1-202ENST00000342085 TRDNQ13061 729 aa17.78■□□□□ 0.44
PDPK1-202ENST00000342085 HNRNPMP52272 730 aaKnown RBP eCLIP17.78■□□□□ 0.447e-8■■■□□ 17
PDPK1-202ENST00000342085 CCDC70Q6NSX1 233 aa17.78■□□□□ 0.44
PDPK1-202ENST00000342085 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
PDPK1-202ENST00000342085 CPLX1O14810 134 aa17.77■□□□□ 0.43
PDPK1-202ENST00000342085 NUP155O75694 1391 aa17.77■□□□□ 0.43
PDPK1-202ENST00000342085 DIAPH3Q9NSV4 1193 aa17.75■□□□□ 0.43
PDPK1-202ENST00000342085 IPO7O95373 1038 aaKnown RBP17.75■□□□□ 0.43
PDPK1-202ENST00000342085 NAP1L1P55209 391 aaKnown RBP17.75■□□□□ 0.43
PDPK1-202ENST00000342085 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 GOLGA6L19H0YKK7 550 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 ST18O60284 1047 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 ANKRD20A12PQ8NF67 263 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 CHMP4CQ96CF2 233 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 DDX58O95786 925 aaKnown RBP17.74■□□□□ 0.43
PDPK1-202ENST00000342085 EPS15P42566 896 aa17.74■□□□□ 0.43
PDPK1-202ENST00000342085 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
PDPK1-202ENST00000342085 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
PDPK1-202ENST00000342085 NLRP2Q9NX02 1062 aa17.73■□□□□ 0.43
PDPK1-202ENST00000342085 BECN2A8MW95 431 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms