RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 NPATQ14207 1427 aa23.52■■□□□ 1.36
TNFRSF12A-202ENST00000341627 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
TNFRSF12A-202ENST00000341627 DUOX2Q9NRD8 1548 aa23.51■■□□□ 1.35
TNFRSF12A-202ENST00000341627 MROH2AA6NES4 1674 aa23.49■■□□□ 1.35
TNFRSF12A-202ENST00000341627 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
TNFRSF12A-202ENST00000341627 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
TNFRSF12A-202ENST00000341627 NCOA1Q15788 1441 aa23.49■■□□□ 1.35
TNFRSF12A-202ENST00000341627 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
TNFRSF12A-202ENST00000341627 SETD1BQ9UPS6 1966 aaKnown RBP23.48■■□□□ 1.35
TNFRSF12A-202ENST00000341627 CLTCQ00610 1675 aaKnown RBP23.48■■□□□ 1.35
TNFRSF12A-202ENST00000341627 ITGAEP38570 1179 aa23.47■■□□□ 1.35
TNFRSF12A-202ENST00000341627 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
TNFRSF12A-202ENST00000341627 ERBINQ96RT1 1412 aa23.45■■□□□ 1.34
TNFRSF12A-202ENST00000341627 EIF2AK4Q9P2K8 1649 aaKnown RBP23.44■■□□□ 1.34
TNFRSF12A-202ENST00000341627 ROCK1Q13464 1354 aa23.42■■□□□ 1.34
TNFRSF12A-202ENST00000341627 FBXO31Q5XUX0 539 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF12A-202ENST00000341627 KDM5DQ9BY66 1539 aa23.41■■□□□ 1.34
TNFRSF12A-202ENST00000341627 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
TNFRSF12A-202ENST00000341627 RNF17Q9BXT8 1623 aaKnown RBP23.38■■□□□ 1.33
TNFRSF12A-202ENST00000341627 PZPP20742 1482 aa23.37■■□□□ 1.33
TNFRSF12A-202ENST00000341627 ANKRD50Q9ULJ7 1429 aa23.36■■□□□ 1.33
TNFRSF12A-202ENST00000341627 ILDR1Q86SU0 546 aaPredicted RBP23.36■■□□□ 1.33
TNFRSF12A-202ENST00000341627 ABCC3O15438 1527 aa23.34■■□□□ 1.33
TNFRSF12A-202ENST00000341627 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
TNFRSF12A-202ENST00000341627 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.33
TNFRSF12A-202ENST00000341627 TNRQ92752 1358 aa23.33■■□□□ 1.33
TNFRSF12A-202ENST00000341627 STRCQ7RTU9 1775 aa23.32■■□□□ 1.32
TNFRSF12A-202ENST00000341627 KANK1Q14678 1352 aa23.31■■□□□ 1.32
TNFRSF12A-202ENST00000341627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFRSF12A-202ENST00000341627 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
TNFRSF12A-202ENST00000341627 PRDM15P57071 1507 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF12A-202ENST00000341627 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
TNFRSF12A-202ENST00000341627 ZC3H13Q5T200 1668 aaKnown RBP23.28■■□□□ 1.32
TNFRSF12A-202ENST00000341627 CEP170BQ9Y4F5 1589 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF12A-202ENST00000341627 PTPRTO14522 1441 aa23.28■■□□□ 1.32
TNFRSF12A-202ENST00000341627 A2ML1A8K2U0 1454 aa23.28■■□□□ 1.32
TNFRSF12A-202ENST00000341627 CAMSAP1Q5T5Y3 1602 aa23.27■■□□□ 1.32
TNFRSF12A-202ENST00000341627 NCKAP5LQ9HCH0 1330 aa23.26■■□□□ 1.31
TNFRSF12A-202ENST00000341627 ZNF142P52746 1687 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF12A-202ENST00000341627 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
TNFRSF12A-202ENST00000341627 PKD2Q13563 968 aa23.22■■□□□ 1.31
TNFRSF12A-202ENST00000341627 ARHGAP31Q2M1Z3 1444 aa23.22■■□□□ 1.31
TNFRSF12A-202ENST00000341627 ERVK-7P63135 1459 aa23.21■■□□□ 1.31
TNFRSF12A-202ENST00000341627 NLRP1Q9C000 1473 aa23.21■■□□□ 1.31
TNFRSF12A-202ENST00000341627 CEP152O94986 1710 aa23.21■■□□□ 1.31
TNFRSF12A-202ENST00000341627 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
TNFRSF12A-202ENST00000341627 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
TNFRSF12A-202ENST00000341627 NAIPQ13075 1403 aa23.2■■□□□ 1.3
TNFRSF12A-202ENST00000341627 CERKQ8TCT0 537 aa23.2■■□□□ 1.3
TNFRSF12A-202ENST00000341627 FBXO41Q8TF61 875 aa23.2■■□□□ 1.3
TNFRSF12A-202ENST00000341627 VWDEQ8N2E2 1590 aa23.19■■□□□ 1.3
TNFRSF12A-202ENST00000341627 LMTK2Q8IWU2 1503 aa23.18■■□□□ 1.3
TNFRSF12A-202ENST00000341627 UNC13BO14795 1591 aa23.18■■□□□ 1.3
TNFRSF12A-202ENST00000341627 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
TNFRSF12A-202ENST00000341627 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF12A-202ENST00000341627 NUP155O75694 1391 aa23.14■■□□□ 1.29
TNFRSF12A-202ENST00000341627 UGGT1Q9NYU2 1555 aa23.12■■□□□ 1.29
TNFRSF12A-202ENST00000341627 ANKLE2Q86XL3 938 aa23.11■■□□□ 1.29
TNFRSF12A-202ENST00000341627 EFCAB6Q5THR3 1501 aa23.1■■□□□ 1.29
TNFRSF12A-202ENST00000341627 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.29
TNFRSF12A-202ENST00000341627 TET3O43151 1660 aa23.08■■□□□ 1.29
TNFRSF12A-202ENST00000341627 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.28
TNFRSF12A-202ENST00000341627 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.28
TNFRSF12A-202ENST00000341627 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
TNFRSF12A-202ENST00000341627 NOS1P29475 1434 aa23.06■■□□□ 1.28
TNFRSF12A-202ENST00000341627 IDI1Q13907 227 aa23.05■■□□□ 1.28
TNFRSF12A-202ENST00000341627 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
TNFRSF12A-202ENST00000341627 CFAP65Q6ZU64 1925 aaKnown RBP23.05■■□□□ 1.28
TNFRSF12A-202ENST00000341627 NEURL4Q96JN8 1562 aa23.04■■□□□ 1.28
TNFRSF12A-202ENST00000341627 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
TNFRSF12A-202ENST00000341627 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
TNFRSF12A-202ENST00000341627 MED14O60244 1454 aa23.02■■□□□ 1.28
TNFRSF12A-202ENST00000341627 NPHP4O75161 1426 aaPredicted RBP23■■□□□ 1.27
TNFRSF12A-202ENST00000341627 LTKP29376 864 aa22.99■■□□□ 1.27
TNFRSF12A-202ENST00000341627 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
TNFRSF12A-202ENST00000341627 SYNMO15061 1565 aa22.98■■□□□ 1.27
TNFRSF12A-202ENST00000341627 ARHGAP23Q9P227 1491 aa22.98■■□□□ 1.27
TNFRSF12A-202ENST00000341627 UBR1Q8IWV7 1749 aa22.97■■□□□ 1.27
TNFRSF12A-202ENST00000341627 E9PCH4 1651 aa22.97■■□□□ 1.27
TNFRSF12A-202ENST00000341627 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
TNFRSF12A-202ENST00000341627 TMEM2Q9UHN6 1383 aa22.96■■□□□ 1.27
TNFRSF12A-202ENST00000341627 SLIT1O75093 1534 aa22.96■■□□□ 1.27
TNFRSF12A-202ENST00000341627 STAG3Q9UJ98 1225 aa22.95■■□□□ 1.26
TNFRSF12A-202ENST00000341627 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
TNFRSF12A-202ENST00000341627 PIK3C2BO00750 1634 aa22.94■■□□□ 1.26
TNFRSF12A-202ENST00000341627 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
TNFRSF12A-202ENST00000341627 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
TNFRSF12A-202ENST00000341627 RAB3GAP2Q9H2M9 1393 aa22.93■■□□□ 1.26
TNFRSF12A-202ENST00000341627 IQSEC2Q5JU85 1478 aa22.92■■□□□ 1.26
TNFRSF12A-202ENST00000341627 EID1Q9Y6B2 187 aa22.91■■□□□ 1.26
TNFRSF12A-202ENST00000341627 HRCP23327 699 aa22.87■■□□□ 1.25
TNFRSF12A-202ENST00000341627 MPHOSPH9Q99550 1183 aa22.87■■□□□ 1.25
TNFRSF12A-202ENST00000341627 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
TNFRSF12A-202ENST00000341627 ADGRB3O60242 1522 aa22.86■■□□□ 1.25
TNFRSF12A-202ENST00000341627 KDM5AP29375 1690 aaKnown RBP22.85■■□□□ 1.25
TNFRSF12A-202ENST00000341627 SPHKAPQ2M3C7 1700 aa22.84■■□□□ 1.25
TNFRSF12A-202ENST00000341627 CPS1P31327 1500 aa22.83■■□□□ 1.25
TNFRSF12A-202ENST00000341627 TRIM26Q12899 539 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF12A-202ENST00000341627 CHGAP10645 457 aaKnown RBP22.81■■□□□ 1.24
TNFRSF12A-202ENST00000341627 TRPM2O94759 1503 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms