RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 TSPY10P0CW01 314 aa10.04□□□□□ -0.8
FCF1-201ENST00000341162 RRP7BPQ9NSQ0 103 aa10.04□□□□□ -0.8
FCF1-201ENST00000341162 NEUROD1Q13562 356 aa10.03□□□□□ -0.8
FCF1-201ENST00000341162 MYO3AQ8NEV4 1616 aa10.03□□□□□ -0.8
FCF1-201ENST00000341162 REREQ9P2R6 1566 aa10.03□□□□□ -0.8
FCF1-201ENST00000341162 NEO1Q92859 1461 aa10.03□□□□□ -0.8
FCF1-201ENST00000341162 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
FCF1-201ENST00000341162 EIF4G2P78344 907 aaKnown RBP eCLIP10.03□□□□□ -0.8
FCF1-201ENST00000341162 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
FCF1-201ENST00000341162 MAP3K4Q9Y6R4 1608 aa10.02□□□□□ -0.81
FCF1-201ENST00000341162 MYOM2P54296 1465 aa10.01□□□□□ -0.81
FCF1-201ENST00000341162 ZNF644Q9H582 1327 aaPredicted RBP10.01□□□□□ -0.81
FCF1-201ENST00000341162 SCAPERQ9BY12 1400 aa10.01□□□□□ -0.81
FCF1-201ENST00000341162 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
FCF1-201ENST00000341162 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
FCF1-201ENST00000341162 MLH3Q9UHC1 1453 aa10□□□□□ -0.81
FCF1-201ENST00000341162 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
FCF1-201ENST00000341162 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
FCF1-201ENST00000341162 ZNF518AQ6AHZ1 1483 aa10□□□□□ -0.81
FCF1-201ENST00000341162 PRAG1Q86YV5 1406 aa10□□□□□ -0.81
FCF1-201ENST00000341162 EFCAB2Q5VUJ9 269 aa10□□□□□ -0.81
FCF1-201ENST00000341162 SYNMO15061 1565 aa9.99□□□□□ -0.81
FCF1-201ENST00000341162 SETBP1Q9Y6X0 1596 aa9.99□□□□□ -0.81
FCF1-201ENST00000341162 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
FCF1-201ENST00000341162 FBLN2P98095 1184 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 NUP155O75694 1391 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 KIF1BO60333 1816 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 FANCAO15360 1455 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 ANP32CO43423 234 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 L3MBTL2Q969R5 705 aa9.98□□□□□ -0.81
FCF1-201ENST00000341162 NRXN1Q9ULB1 1477 aa9.97□□□□□ -0.81
FCF1-201ENST00000341162 CCDC144AA2RUR9 1427 aa9.97□□□□□ -0.81
FCF1-201ENST00000341162 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.81
FCF1-201ENST00000341162 A2MP01023 1474 aa9.96□□□□□ -0.82
FCF1-201ENST00000341162 PIK3C2BO00750 1634 aa9.96□□□□□ -0.82
FCF1-201ENST00000341162 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
FCF1-201ENST00000341162 RICTORQ6R327 1708 aa9.95□□□□□ -0.82
FCF1-201ENST00000341162 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
FCF1-201ENST00000341162 POGZQ7Z3K3 1410 aa9.95□□□□□ -0.82
FCF1-201ENST00000341162 HSPA5P11021 654 aaKnown RBP9.95□□□□□ -0.82
FCF1-201ENST00000341162 ASXL2Q76L83 1435 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 WASHC2CQ9Y4E1 1318 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 ERICH6BQ5W0A0 696 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 ADGRB3O60242 1522 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 USP47Q96K76 1375 aa9.94□□□□□ -0.82
FCF1-201ENST00000341162 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
FCF1-201ENST00000341162 PKD2Q13563 968 aa9.93□□□□□ -0.82
FCF1-201ENST00000341162 DHX29Q7Z478 1369 aaKnown RBP9.93□□□□□ -0.82
FCF1-201ENST00000341162 TRAPPC8Q9Y2L5 1435 aa9.93□□□□□ -0.82
FCF1-201ENST00000341162 PPRC1Q5VV67 1664 aaKnown RBP9.93□□□□□ -0.82
FCF1-201ENST00000341162 PPLO60437 1756 aa9.92□□□□□ -0.82
FCF1-201ENST00000341162 CAMSAP1Q5T5Y3 1602 aa9.92□□□□□ -0.82
FCF1-201ENST00000341162 USP32Q8NFA0 1604 aa9.92□□□□□ -0.82
FCF1-201ENST00000341162 KANK1Q14678 1352 aa9.92□□□□□ -0.82
FCF1-201ENST00000341162 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
FCF1-201ENST00000341162 ARHGAP31Q2M1Z3 1444 aa9.91□□□□□ -0.82
FCF1-201ENST00000341162 ABCA6Q8N139 1617 aa9.9□□□□□ -0.82
FCF1-201ENST00000341162 GTF3C3Q9Y5Q9 886 aa9.9□□□□□ -0.82
FCF1-201ENST00000341162 NBPF8Q3BBV2 869 aa9.89□□□□□ -0.83
FCF1-201ENST00000341162 KDM5AP29375 1690 aaKnown RBP9.89□□□□□ -0.83
FCF1-201ENST00000341162 UGGT1Q9NYU2 1555 aa9.89□□□□□ -0.83
FCF1-201ENST00000341162 DIP2CQ9Y2E4 1556 aa9.88□□□□□ -0.83
FCF1-201ENST00000341162 AGLP35573 1532 aa9.88□□□□□ -0.83
FCF1-201ENST00000341162 HNRNPMP52272 730 aaKnown RBP eCLIP9.88□□□□□ -0.83
FCF1-201ENST00000341162 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
FCF1-201ENST00000341162 KIF7Q2M1P5 1343 aa9.87□□□□□ -0.83
FCF1-201ENST00000341162 MYOM1P52179 1685 aa9.87□□□□□ -0.83
FCF1-201ENST00000341162 NPC1L1Q9UHC9 1359 aa9.87□□□□□ -0.83
FCF1-201ENST00000341162 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
FCF1-201ENST00000341162 SPAG9O60271 1321 aaKnown RBP9.86□□□□□ -0.83
FCF1-201ENST00000341162 MROH2AA6NES4 1674 aa9.86□□□□□ -0.83
FCF1-201ENST00000341162 ZNF777Q9ULD5 760 aaPredicted RBP9.86□□□□□ -0.83
FCF1-201ENST00000341162 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
FCF1-201ENST00000341162 ABCC3O15438 1527 aa9.86□□□□□ -0.83
FCF1-201ENST00000341162 BRD4O60885 1362 aaPredicted RBP9.85□□□□□ -0.83
FCF1-201ENST00000341162 ZFYVE9O95405 1425 aa9.85□□□□□ -0.83
FCF1-201ENST00000341162 EIF3AQ14152 1382 aaKnown RBP9.84□□□□□ -0.83
FCF1-201ENST00000341162 DIP2BQ9P265 1576 aa9.83□□□□□ -0.84
FCF1-201ENST00000341162 PRKRIP1Q9H875 184 aaPredicted RBP9.83□□□□□ -0.84
FCF1-201ENST00000341162 RALBP1Q15311 655 aa9.83□□□□□ -0.84
FCF1-201ENST00000341162 LRPPRCP42704 1394 aaKnown RBP9.83□□□□□ -0.84
FCF1-201ENST00000341162 ZBED9Q6R2W3 1325 aa9.83□□□□□ -0.84
FCF1-201ENST00000341162 OSCARQ8IYS5 282 aa9.83□□□□□ -0.84
FCF1-201ENST00000341162 NOS1P29475 1434 aa9.82□□□□□ -0.84
FCF1-201ENST00000341162 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
FCF1-201ENST00000341162 PARD3Q8TEW0 1356 aa9.82□□□□□ -0.84
FCF1-201ENST00000341162 CLTCQ00610 1675 aaKnown RBP9.82□□□□□ -0.84
FCF1-201ENST00000341162 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
FCF1-201ENST00000341162 RPGRIP1LQ68CZ1 1315 aa9.81□□□□□ -0.84
FCF1-201ENST00000341162 RIMBP3CA6NJZ7 1639 aa9.81□□□□□ -0.84
FCF1-201ENST00000341162 RIMBP3BA6NNM3 1639 aa9.81□□□□□ -0.84
FCF1-201ENST00000341162 RIMBP3Q9UFD9 1639 aa9.81□□□□□ -0.84
FCF1-201ENST00000341162 PREX1Q8TCU6 1659 aa9.8□□□□□ -0.84
FCF1-201ENST00000341162 PUS7Q96PZ0 661 aaKnown RBP9.8□□□□□ -0.84
FCF1-201ENST00000341162 SMG6Q86US8 1419 aaKnown RBP9.8□□□□□ -0.84
FCF1-201ENST00000341162 PPP6R1Q9UPN7 881 aa9.8□□□□□ -0.84
FCF1-201ENST00000341162 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms