RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 HSPA2P54652 639 aa17.3■□□□□ 0.36
SLC28A1-202ENST00000338602 DUOX2Q9NRD8 1548 aa17.3■□□□□ 0.36
SLC28A1-202ENST00000338602 CROCC2H7BZ55 1655 aa17.29■□□□□ 0.36
SLC28A1-202ENST00000338602 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
SLC28A1-202ENST00000338602 WASHC2CQ9Y4E1 1318 aa17.27■□□□□ 0.36
SLC28A1-202ENST00000338602 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.27■□□□□ 0.36
SLC28A1-202ENST00000338602 SPATA31D1Q6ZQQ2 1576 aa17.26■□□□□ 0.35
SLC28A1-202ENST00000338602 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
SLC28A1-202ENST00000338602 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
SLC28A1-202ENST00000338602 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
SLC28A1-202ENST00000338602 ERBINQ96RT1 1412 aa17.25■□□□□ 0.35
SLC28A1-202ENST00000338602 EIF2AK4Q9P2K8 1649 aaKnown RBP17.24■□□□□ 0.35
SLC28A1-202ENST00000338602 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
SLC28A1-202ENST00000338602 C3P01024 1663 aa17.23■□□□□ 0.35
SLC28A1-202ENST00000338602 ITGAEP38570 1179 aa17.23■□□□□ 0.35
SLC28A1-202ENST00000338602 SETD1BQ9UPS6 1966 aaKnown RBP17.23■□□□□ 0.35
SLC28A1-202ENST00000338602 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
SLC28A1-202ENST00000338602 KDM5DQ9BY66 1539 aa17.22■□□□□ 0.35
SLC28A1-202ENST00000338602 NPATQ14207 1427 aa17.22■□□□□ 0.35
SLC28A1-202ENST00000338602 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
SLC28A1-202ENST00000338602 RNF17Q9BXT8 1623 aaKnown RBP17.2■□□□□ 0.34
SLC28A1-202ENST00000338602 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
SLC28A1-202ENST00000338602 KANK1Q14678 1352 aa17.2■□□□□ 0.34
SLC28A1-202ENST00000338602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.344e-10■■■■■ 32
SLC28A1-202ENST00000338602 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
SLC28A1-202ENST00000338602 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
SLC28A1-202ENST00000338602 PTPRKQ15262 1439 aa17.17■□□□□ 0.34
SLC28A1-202ENST00000338602 ANKRD50Q9ULJ7 1429 aa17.17■□□□□ 0.34
SLC28A1-202ENST00000338602 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.34
SLC28A1-202ENST00000338602 ABCC3O15438 1527 aa17.14■□□□□ 0.33
SLC28A1-202ENST00000338602 PZPP20742 1482 aa17.14■□□□□ 0.33
SLC28A1-202ENST00000338602 PRDM15P57071 1507 aaPredicted RBP17.12■□□□□ 0.33
SLC28A1-202ENST00000338602 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
SLC28A1-202ENST00000338602 TNRQ92752 1358 aa17.11■□□□□ 0.33
SLC28A1-202ENST00000338602 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
SLC28A1-202ENST00000338602 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
SLC28A1-202ENST00000338602 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
SLC28A1-202ENST00000338602 ARHGAP31Q2M1Z3 1444 aa17.07■□□□□ 0.32
SLC28A1-202ENST00000338602 CEP152O94986 1710 aa17.07■□□□□ 0.32
SLC28A1-202ENST00000338602 CAMSAP1Q5T5Y3 1602 aa17.06■□□□□ 0.32
SLC28A1-202ENST00000338602 LMTK2Q8IWU2 1503 aa17.05■□□□□ 0.32
SLC28A1-202ENST00000338602 MYO3AQ8NEV4 1616 aa17.05■□□□□ 0.32
SLC28A1-202ENST00000338602 A2ML1A8K2U0 1454 aa17.04■□□□□ 0.32
SLC28A1-202ENST00000338602 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
SLC28A1-202ENST00000338602 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
SLC28A1-202ENST00000338602 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
SLC28A1-202ENST00000338602 CEP170BQ9Y4F5 1589 aaPredicted RBP17.03■□□□□ 0.32
SLC28A1-202ENST00000338602 THEMISQ8N1K5 641 aaPredicted RBP17.02■□□□□ 0.32
SLC28A1-202ENST00000338602 NUP155O75694 1391 aa17.02■□□□□ 0.31
SLC28A1-202ENST00000338602 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
SLC28A1-202ENST00000338602 UNC13BO14795 1591 aa17■□□□□ 0.31
SLC28A1-202ENST00000338602 PKD2Q13563 968 aa17■□□□□ 0.31
SLC28A1-202ENST00000338602 NAIPQ13075 1403 aa16.99■□□□□ 0.31
SLC28A1-202ENST00000338602 HFM1A2PYH4 1435 aa16.98■□□□□ 0.31
SLC28A1-202ENST00000338602 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
SLC28A1-202ENST00000338602 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
SLC28A1-202ENST00000338602 PLA2R1Q13018 1463 aa16.98■□□□□ 0.31
SLC28A1-202ENST00000338602 RPRD2Q5VT52 1461 aaKnown RBP16.98■□□□□ 0.31
SLC28A1-202ENST00000338602 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
SLC28A1-202ENST00000338602 UGGT1Q9NYU2 1555 aa16.96■□□□□ 0.31
SLC28A1-202ENST00000338602 TET3O43151 1660 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 NCKAP5LQ9HCH0 1330 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 SLC52A1Q9NWF4 448 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 PTPRTO14522 1441 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
SLC28A1-202ENST00000338602 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
SLC28A1-202ENST00000338602 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
SLC28A1-202ENST00000338602 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
SLC28A1-202ENST00000338602 NOS1P29475 1434 aa16.93■□□□□ 0.3
SLC28A1-202ENST00000338602 IDI1Q13907 227 aa16.91■□□□□ 0.3
SLC28A1-202ENST00000338602 IQSEC2Q5JU85 1478 aa16.9■□□□□ 0.3
SLC28A1-202ENST00000338602 EID1Q9Y6B2 187 aa16.89■□□□□ 0.3
SLC28A1-202ENST00000338602 SYNMO15061 1565 aa16.87■□□□□ 0.29
SLC28A1-202ENST00000338602 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
SLC28A1-202ENST00000338602 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
SLC28A1-202ENST00000338602 TXNDC2Q86VQ3 553 aa16.86■□□□□ 0.29
SLC28A1-202ENST00000338602 E9PCH4 1651 aa16.86■□□□□ 0.29
SLC28A1-202ENST00000338602 UBR1Q8IWV7 1749 aa16.85■□□□□ 0.29
SLC28A1-202ENST00000338602 SETD5Q9C0A6 1442 aa16.85■□□□□ 0.29
SLC28A1-202ENST00000338602 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
SLC28A1-202ENST00000338602 LTBP4Q8N2S1 1624 aa16.85■□□□□ 0.29
SLC28A1-202ENST00000338602 CHGAP10645 457 aaKnown RBP16.85■□□□□ 0.29
SLC28A1-202ENST00000338602 KDM5AP29375 1690 aaKnown RBP16.83■□□□□ 0.29
SLC28A1-202ENST00000338602 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.29
SLC28A1-202ENST00000338602 UBAP1LF5GYI3 381 aa16.83■□□□□ 0.28
SLC28A1-202ENST00000338602 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
SLC28A1-202ENST00000338602 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
SLC28A1-202ENST00000338602 SLIT1O75093 1534 aa16.82■□□□□ 0.28
SLC28A1-202ENST00000338602 MED14O60244 1454 aa16.82■□□□□ 0.28
SLC28A1-202ENST00000338602 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
SLC28A1-202ENST00000338602 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
SLC28A1-202ENST00000338602 ARHGAP23Q9P227 1491 aa16.81■□□□□ 0.28
SLC28A1-202ENST00000338602 LTKP29376 864 aa16.79■□□□□ 0.28
SLC28A1-202ENST00000338602 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.79■□□□□ 0.28
SLC28A1-202ENST00000338602 NEURL4Q96JN8 1562 aa16.79■□□□□ 0.28
SLC28A1-202ENST00000338602 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
SLC28A1-202ENST00000338602 MPHOSPH9Q99550 1183 aa16.78■□□□□ 0.28
SLC28A1-202ENST00000338602 BCANQ96GW7 911 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms