RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 NEO1Q92859 1461 aa17.65■□□□□ 0.42
ZNF548-201ENST00000336128 GLI2P10070 1586 aa17.65■□□□□ 0.42
ZNF548-201ENST00000336128 MYT1LQ9UL68 1186 aa17.65■□□□□ 0.42
ZNF548-201ENST00000336128 PLA2R1Q13018 1463 aa17.63■□□□□ 0.41
ZNF548-201ENST00000336128 DHX29Q7Z478 1369 aaKnown RBP17.63■□□□□ 0.41
ZNF548-201ENST00000336128 HSPA5P11021 654 aaKnown RBP17.62■□□□□ 0.41
ZNF548-201ENST00000336128 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
ZNF548-201ENST00000336128 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
ZNF548-201ENST00000336128 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
ZNF548-201ENST00000336128 EIF4G2P78344 907 aaKnown RBP eCLIP17.6■□□□□ 0.41
ZNF548-201ENST00000336128 ATP10AO60312 1499 aa17.6■□□□□ 0.41
ZNF548-201ENST00000336128 MLH3Q9UHC1 1453 aa17.6■□□□□ 0.41
ZNF548-201ENST00000336128 E9PCH4 1651 aa17.59■□□□□ 0.41
ZNF548-201ENST00000336128 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
ZNF548-201ENST00000336128 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
ZNF548-201ENST00000336128 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
ZNF548-201ENST00000336128 PRDM15P57071 1507 aaPredicted RBP17.59■□□□□ 0.41
ZNF548-201ENST00000336128 TET3O43151 1660 aa17.58■□□□□ 0.41
ZNF548-201ENST00000336128 DIP2BQ9P265 1576 aa17.58■□□□□ 0.4
ZNF548-201ENST00000336128 A2MP01023 1474 aa17.58■□□□□ 0.4
ZNF548-201ENST00000336128 KANK1Q14678 1352 aa17.57■□□□□ 0.4
ZNF548-201ENST00000336128 KIF3BO15066 747 aa17.56■□□□□ 0.4
ZNF548-201ENST00000336128 ABCA6Q8N139 1617 aa17.56■□□□□ 0.4
ZNF548-201ENST00000336128 ZNF326Q5BKZ1 582 aaKnown RBP17.55■□□□□ 0.4
ZNF548-201ENST00000336128 FRMPD1Q5SYB0 1578 aa17.55■□□□□ 0.4
ZNF548-201ENST00000336128 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
ZNF548-201ENST00000336128 RNF17Q9BXT8 1623 aaKnown RBP17.55■□□□□ 0.4
ZNF548-201ENST00000336128 RICTORQ6R327 1708 aa17.54■□□□□ 0.4
ZNF548-201ENST00000336128 TRPM2O94759 1503 aa17.53■□□□□ 0.4
ZNF548-201ENST00000336128 SPHKAPQ2M3C7 1700 aa17.53■□□□□ 0.4
ZNF548-201ENST00000336128 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.4
ZNF548-201ENST00000336128 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
ZNF548-201ENST00000336128 FAM69CQ0P6D2 419 aa17.51■□□□□ 0.39
ZNF548-201ENST00000336128 BCORL1Q5H9F3 1711 aa17.5■□□□□ 0.39
ZNF548-201ENST00000336128 RAPGEF3O95398 923 aa17.5■□□□□ 0.39
ZNF548-201ENST00000336128 KDM2AQ9Y2K7 1162 aa17.5■□□□□ 0.39
ZNF548-201ENST00000336128 PTPRTO14522 1441 aa17.5■□□□□ 0.39
ZNF548-201ENST00000336128 DIP2CQ9Y2E4 1556 aa17.5■□□□□ 0.39
ZNF548-201ENST00000336128 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
ZNF548-201ENST00000336128 LMTK2Q8IWU2 1503 aa17.49■□□□□ 0.39
ZNF548-201ENST00000336128 PPRC1Q5VV67 1664 aaKnown RBP17.48■□□□□ 0.39
ZNF548-201ENST00000336128 EFCAB6Q5THR3 1501 aa17.48■□□□□ 0.39
ZNF548-201ENST00000336128 CLTCL1P53675 1640 aa17.48■□□□□ 0.39
ZNF548-201ENST00000336128 CEP152O94986 1710 aa17.48■□□□□ 0.39
ZNF548-201ENST00000336128 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
ZNF548-201ENST00000336128 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
ZNF548-201ENST00000336128 USP47Q96K76 1375 aa17.47■□□□□ 0.39
ZNF548-201ENST00000336128 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
ZNF548-201ENST00000336128 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
ZNF548-201ENST00000336128 TRPM1Q7Z4N2 1603 aa17.46■□□□□ 0.39
ZNF548-201ENST00000336128 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
ZNF548-201ENST00000336128 CCDC7Q96M83 1385 aa17.45■□□□□ 0.38
ZNF548-201ENST00000336128 TSPOAP1O95153 1857 aa17.45■□□□□ 0.38
ZNF548-201ENST00000336128 ZMYM4Q5VZL5 1548 aa17.44■□□□□ 0.38
ZNF548-201ENST00000336128 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
ZNF548-201ENST00000336128 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
ZNF548-201ENST00000336128 YEATS2Q9ULM3 1422 aa17.42■□□□□ 0.38
ZNF548-201ENST00000336128 ROCK2O75116 1388 aaKnown RBP17.41■□□□□ 0.38
ZNF548-201ENST00000336128 CNTLNQ9NXG0 1405 aa17.4■□□□□ 0.38
ZNF548-201ENST00000336128 ABCC3O15438 1527 aa17.4■□□□□ 0.38
ZNF548-201ENST00000336128 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
ZNF548-201ENST00000336128 ANP32CO43423 234 aa17.4■□□□□ 0.38
ZNF548-201ENST00000336128 LAMC1P11047 1609 aa17.39■□□□□ 0.37
ZNF548-201ENST00000336128 KIF7Q2M1P5 1343 aa17.39■□□□□ 0.37
ZNF548-201ENST00000336128 NEURL4Q96JN8 1562 aa17.39■□□□□ 0.37
ZNF548-201ENST00000336128 GGT6Q6P531 493 aa17.39■□□□□ 0.37
ZNF548-201ENST00000336128 UGGT1Q9NYU2 1555 aa17.38■□□□□ 0.37
ZNF548-201ENST00000336128 CAMSAP1Q5T5Y3 1602 aa17.37■□□□□ 0.37
ZNF548-201ENST00000336128 MADDQ8WXG6 1647 aa17.37■□□□□ 0.37
ZNF548-201ENST00000336128 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
ZNF548-201ENST00000336128 NPATQ14207 1427 aa17.36■□□□□ 0.37
ZNF548-201ENST00000336128 KIF1BO60333 1816 aa17.35■□□□□ 0.37
ZNF548-201ENST00000336128 ZC3H13Q5T200 1668 aaKnown RBP17.34■□□□□ 0.37
ZNF548-201ENST00000336128 CCER2I3L3R5 266 aa17.33■□□□□ 0.37
ZNF548-201ENST00000336128 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.37
ZNF548-201ENST00000336128 WASHC2CQ9Y4E1 1318 aa17.33■□□□□ 0.37
ZNF548-201ENST00000336128 MROH2AA6NES4 1674 aa17.33■□□□□ 0.36
ZNF548-201ENST00000336128 REREQ9P2R6 1566 aa17.31■□□□□ 0.36
ZNF548-201ENST00000336128 STAC3Q96MF2 364 aa17.31■□□□□ 0.36
ZNF548-201ENST00000336128 ARID4BQ4LE39 1312 aaPredicted RBP17.31■□□□□ 0.36
ZNF548-201ENST00000336128 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
ZNF548-201ENST00000336128 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
ZNF548-201ENST00000336128 SIGLEC1Q9BZZ2 1709 aa17.29■□□□□ 0.36
ZNF548-201ENST00000336128 IFT172Q9UG01 1749 aa17.29■□□□□ 0.36
ZNF548-201ENST00000336128 MYOM2P54296 1465 aa17.29■□□□□ 0.36
ZNF548-201ENST00000336128 NOS1P29475 1434 aa17.28■□□□□ 0.36
ZNF548-201ENST00000336128 ARHGAP31Q2M1Z3 1444 aa17.28■□□□□ 0.36
ZNF548-201ENST00000336128 AGLP35573 1532 aa17.27■□□□□ 0.35
ZNF548-201ENST00000336128 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
ZNF548-201ENST00000336128 COL17A1Q9UMD9 1497 aaPredicted RBP17.26■□□□□ 0.35
ZNF548-201ENST00000336128 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
ZNF548-201ENST00000336128 SYNMO15061 1565 aa17.26■□□□□ 0.35
ZNF548-201ENST00000336128 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
ZNF548-201ENST00000336128 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
ZNF548-201ENST00000336128 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
ZNF548-201ENST00000336128 PIK3C2BO00750 1634 aa17.25■□□□□ 0.35
ZNF548-201ENST00000336128 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
ZNF548-201ENST00000336128 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
ZNF548-201ENST00000336128 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
ZNF548-201ENST00000336128 PPLO60437 1756 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms