RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
RAB6A-202ENST00000336083 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
RAB6A-202ENST00000336083 NUP155O75694 1391 aa16.23■□□□□ 0.19
RAB6A-202ENST00000336083 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
RAB6A-202ENST00000336083 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
RAB6A-202ENST00000336083 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
RAB6A-202ENST00000336083 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
RAB6A-202ENST00000336083 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.19
RAB6A-202ENST00000336083 WDR62O43379 1518 aa16.21■□□□□ 0.18
RAB6A-202ENST00000336083 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
RAB6A-202ENST00000336083 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
RAB6A-202ENST00000336083 ARXQ96QS3 562 aa16.2■□□□□ 0.18
RAB6A-202ENST00000336083 UHRF1BP1Q6BDS2 1440 aa16.18■□□□□ 0.18
RAB6A-202ENST00000336083 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
RAB6A-202ENST00000336083 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
RAB6A-202ENST00000336083 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 PANK3Q9H999 370 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
RAB6A-202ENST00000336083 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
RAB6A-202ENST00000336083 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
RAB6A-202ENST00000336083 PBRM1Q86U86 1689 aa16.16■□□□□ 0.18
RAB6A-202ENST00000336083 POGKQ9P215 609 aa16.16■□□□□ 0.18
RAB6A-202ENST00000336083 FAM43AQ8N2R8 423 aa16.15■□□□□ 0.18
RAB6A-202ENST00000336083 KIAA0586Q9BVV6 1533 aa16.15■□□□□ 0.18
RAB6A-202ENST00000336083 RSPH6AQ9H0K4 717 aa16.15■□□□□ 0.18
RAB6A-202ENST00000336083 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
RAB6A-202ENST00000336083 FBLN2P98095 1184 aa16.13■□□□□ 0.17
RAB6A-202ENST00000336083 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
RAB6A-202ENST00000336083 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
RAB6A-202ENST00000336083 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
RAB6A-202ENST00000336083 BLMP54132 1417 aaPredicted RBP16.11■□□□□ 0.17
RAB6A-202ENST00000336083 NUP153P49790 1475 aaKnown RBP16.11■□□□□ 0.17
RAB6A-202ENST00000336083 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
RAB6A-202ENST00000336083 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
RAB6A-202ENST00000336083 GOLGA2Q08379 1002 aa16.09■□□□□ 0.17
RAB6A-202ENST00000336083 E9PCH4 1651 aa16.08■□□□□ 0.17
RAB6A-202ENST00000336083 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
RAB6A-202ENST00000336083 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
RAB6A-202ENST00000336083 ARHGEF12Q9NZN5 1544 aa16.07■□□□□ 0.16
RAB6A-202ENST00000336083 GPATCH8Q9UKJ3 1502 aaKnown RBP16.07■□□□□ 0.16
RAB6A-202ENST00000336083 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
RAB6A-202ENST00000336083 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
RAB6A-202ENST00000336083 ZMYM4Q5VZL5 1548 aa16.06■□□□□ 0.16
RAB6A-202ENST00000336083 SEC24BO95487 1268 aa16.06■□□□□ 0.16
RAB6A-202ENST00000336083 BCAR3O75815 825 aa16.05■□□□□ 0.16
RAB6A-202ENST00000336083 TROQ12816 1431 aaPredicted RBP16.05■□□□□ 0.16
RAB6A-202ENST00000336083 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
RAB6A-202ENST00000336083 IGHDP01880 384 aa16.04■□□□□ 0.16
RAB6A-202ENST00000336083 TESK2Q96S53 571 aa16.04■□□□□ 0.16
RAB6A-202ENST00000336083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
RAB6A-202ENST00000336083 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
RAB6A-202ENST00000336083 TMF1P82094 1093 aa16.03■□□□□ 0.16
RAB6A-202ENST00000336083 ADGBQ8N7X0 1667 aa16.03■□□□□ 0.16
RAB6A-202ENST00000336083 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
RAB6A-202ENST00000336083 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.165e-8■■□□□ 12.5
RAB6A-202ENST00000336083 BECN1Q14457 450 aa16.03■□□□□ 0.16
RAB6A-202ENST00000336083 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.16
RAB6A-202ENST00000336083 KNSTRNQ9Y448 316 aa16.02■□□□□ 0.16
RAB6A-202ENST00000336083 USP19O94966 1318 aa16.02■□□□□ 0.15
RAB6A-202ENST00000336083 PPP2R1AP30153 589 aa16.02■□□□□ 0.15
RAB6A-202ENST00000336083 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.15
RAB6A-202ENST00000336083 C9orf84Q5VXU9 1444 aa16.02■□□□□ 0.15
RAB6A-202ENST00000336083 PRAG1Q86YV5 1406 aa16.01■□□□□ 0.15
RAB6A-202ENST00000336083 GZF1Q9H116 711 aaPredicted RBP16.01■□□□□ 0.15
RAB6A-202ENST00000336083 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
RAB6A-202ENST00000336083 CANXP27824 592 aaKnown RBP16■□□□□ 0.15
RAB6A-202ENST00000336083 SLFN5Q08AF3 891 aa16■□□□□ 0.15
RAB6A-202ENST00000336083 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
RAB6A-202ENST00000336083 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
RAB6A-202ENST00000336083 RAPGEF6Q8TEU7 1601 aa15.99■□□□□ 0.15
RAB6A-202ENST00000336083 COL17A1Q9UMD9 1497 aaPredicted RBP15.99■□□□□ 0.15
RAB6A-202ENST00000336083 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
RAB6A-202ENST00000336083 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
RAB6A-202ENST00000336083 APAF1O14727 1248 aa15.99■□□□□ 0.15
RAB6A-202ENST00000336083 L1TD1Q5T7N2 865 aaKnown RBP15.99■□□□□ 0.15
RAB6A-202ENST00000336083 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
RAB6A-202ENST00000336083 PLB1Q6P1J6 1458 aa15.98■□□□□ 0.15
RAB6A-202ENST00000336083 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
RAB6A-202ENST00000336083 PANK1Q8TE04 598 aa15.97■□□□□ 0.15
RAB6A-202ENST00000336083 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
RAB6A-202ENST00000336083 INSRP06213 1382 aa15.97■□□□□ 0.15
RAB6A-202ENST00000336083 KIAA0556O60303 1618 aa15.97■□□□□ 0.15
RAB6A-202ENST00000336083 CEP170Q5SW79 1584 aa15.96■□□□□ 0.15
RAB6A-202ENST00000336083 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
RAB6A-202ENST00000336083 KDM5DQ9BY66 1539 aa15.95■□□□□ 0.14
RAB6A-202ENST00000336083 PLEKHD1A6NEE1 506 aa15.95■□□□□ 0.14
RAB6A-202ENST00000336083 PANK2Q9BZ23 570 aa15.95■□□□□ 0.14
RAB6A-202ENST00000336083 CROCC2H7BZ55 1655 aa15.94■□□□□ 0.14
RAB6A-202ENST00000336083 UPF2Q9HAU5 1272 aaKnown RBP15.93■□□□□ 0.14
RAB6A-202ENST00000336083 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
RAB6A-202ENST00000336083 EIF3AQ14152 1382 aaKnown RBP15.93■□□□□ 0.14
RAB6A-202ENST00000336083 XRCC6P12956 609 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAB6A-202ENST00000336083 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
RAB6A-202ENST00000336083 GOLGA6L3A6NEY3 463 aa15.93■□□□□ 0.14
RAB6A-202ENST00000336083 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
RAB6A-202ENST00000336083 CLUAP1Q96AJ1 413 aa15.92■□□□□ 0.14
RAB6A-202ENST00000336083 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 441.5 ms