RNA–Protein interactions for RNA: ENST00000334186.8

PPFIA3-201, Transcript of PTPRF interacting protein alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIA3, Length 4,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-201ENST00000334186 OS9Q13438 667 aaPredicted RBP20.85■□□□□ 0.93
PPFIA3-201ENST00000334186 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
PPFIA3-201ENST00000334186 RWDD1Q9H446 243 aaPredicted RBP20.83■□□□□ 0.93
PPFIA3-201ENST00000334186 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.93
PPFIA3-201ENST00000334186 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
PPFIA3-201ENST00000334186 CALD1Q05682 793 aaKnown RBP20.82■□□□□ 0.92
PPFIA3-201ENST00000334186 VSIG10Q8N0Z9 540 aa20.82■□□□□ 0.92
PPFIA3-201ENST00000334186 GBP4Q96PP9 640 aa20.82■□□□□ 0.92
PPFIA3-201ENST00000334186 USP47Q96K76 1375 aa20.82■□□□□ 0.92
PPFIA3-201ENST00000334186 MYOM3Q5VTT5 1437 aa20.81■□□□□ 0.92
PPFIA3-201ENST00000334186 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
PPFIA3-201ENST00000334186 ZBED9Q6R2W3 1325 aa20.8■□□□□ 0.92
PPFIA3-201ENST00000334186 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
PPFIA3-201ENST00000334186 PANK3Q9H999 370 aa20.8■□□□□ 0.92
PPFIA3-201ENST00000334186 CCDC146Q8IYE0 955 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 TERF2IPQ9NYB0 399 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 ZRSR1Q15695 479 aaKnown RBP20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 CFAP44Q96MT7 982 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 WASHC2CQ9Y4E1 1318 aa20.79■□□□□ 0.92
PPFIA3-201ENST00000334186 ITPRIPQ8IWB1 547 aa20.78■□□□□ 0.92
PPFIA3-201ENST00000334186 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
PPFIA3-201ENST00000334186 NCOA2Q15596 1464 aa20.78■□□□□ 0.92
PPFIA3-201ENST00000334186 ARID3AQ99856 593 aa20.77■□□□□ 0.92
PPFIA3-201ENST00000334186 PRG4Q92954 1404 aaPredicted RBP20.77■□□□□ 0.92
PPFIA3-201ENST00000334186 UACAQ9BZF9 1416 aa20.77■□□□□ 0.92
PPFIA3-201ENST00000334186 KCNJ4P48050 445 aa20.77■□□□□ 0.92
PPFIA3-201ENST00000334186 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
PPFIA3-201ENST00000334186 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
PPFIA3-201ENST00000334186 PTMSP20962 102 aa20.74■□□□□ 0.91
PPFIA3-201ENST00000334186 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
PPFIA3-201ENST00000334186 FYCO1Q9BQS8 1478 aa20.74■□□□□ 0.91
PPFIA3-201ENST00000334186 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
PPFIA3-201ENST00000334186 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
PPFIA3-201ENST00000334186 MCCP23508 829 aa20.72■□□□□ 0.91
PPFIA3-201ENST00000334186 FGD1P98174 961 aa20.72■□□□□ 0.91
PPFIA3-201ENST00000334186 EXOC6Q8TAG9 804 aa20.72■□□□□ 0.91
PPFIA3-201ENST00000334186 NUTM2DQ5VT03 806 aaPredicted RBP20.71■□□□□ 0.91
PPFIA3-201ENST00000334186 CLUAP1Q96AJ1 413 aa20.71■□□□□ 0.91
PPFIA3-201ENST00000334186 APBB1O00213 710 aa20.7■□□□□ 0.91
PPFIA3-201ENST00000334186 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
PPFIA3-201ENST00000334186 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
PPFIA3-201ENST00000334186 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
PPFIA3-201ENST00000334186 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
PPFIA3-201ENST00000334186 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
PPFIA3-201ENST00000334186 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
PPFIA3-201ENST00000334186 ZNF608Q9ULD9 1512 aaPredicted RBP20.66■□□□□ 0.9
PPFIA3-201ENST00000334186 MFAP1P55081 439 aaKnown RBP20.65■□□□□ 0.9
PPFIA3-201ENST00000334186 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
PPFIA3-201ENST00000334186 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.9
PPFIA3-201ENST00000334186 CENPQQ7L2Z9 268 aaPredicted RBP20.64■□□□□ 0.89
PPFIA3-201ENST00000334186 PAK3O75914 559 aaPredicted RBP20.63■□□□□ 0.89
PPFIA3-201ENST00000334186 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
PPFIA3-201ENST00000334186 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
PPFIA3-201ENST00000334186 RRP7AQ9Y3A4 280 aaKnown RBP20.62■□□□□ 0.89
PPFIA3-201ENST00000334186 IL27Q8NEV9 243 aa20.62■□□□□ 0.89
PPFIA3-201ENST00000334186 KIAA0586Q9BVV6 1533 aa20.62■□□□□ 0.89
PPFIA3-201ENST00000334186 PLIN1O60240 522 aa20.61■□□□□ 0.89
PPFIA3-201ENST00000334186 PRKCSHP14314 528 aaPredicted RBP20.61■□□□□ 0.89
PPFIA3-201ENST00000334186 STK31Q9BXU1 1019 aa20.61■□□□□ 0.89
PPFIA3-201ENST00000334186 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
PPFIA3-201ENST00000334186 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
PPFIA3-201ENST00000334186 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
PPFIA3-201ENST00000334186 E9PSI1 815 aa20.6■□□□□ 0.89
PPFIA3-201ENST00000334186 NRDCO43847 1150 aa20.6■□□□□ 0.89
PPFIA3-201ENST00000334186 TIAM1Q13009 1591 aa20.6■□□□□ 0.89
PPFIA3-201ENST00000334186 NAP1L2Q9ULW6 460 aaPredicted RBP20.59■□□□□ 0.89
PPFIA3-201ENST00000334186 NFKBIBQ15653 356 aa20.59■□□□□ 0.89
PPFIA3-201ENST00000334186 CNTLNQ9NXG0 1405 aa20.59■□□□□ 0.89
PPFIA3-201ENST00000334186 CGNL1Q0VF96 1302 aa20.59■□□□□ 0.89
PPFIA3-201ENST00000334186 ANKRD50Q9ULJ7 1429 aa20.58■□□□□ 0.89
PPFIA3-201ENST00000334186 SYNJ2O15056 1496 aa20.58■□□□□ 0.89
PPFIA3-201ENST00000334186 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.58■□□□□ 0.89
PPFIA3-201ENST00000334186 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.89
PPFIA3-201ENST00000334186 GOLGA6L6A8MZA4 724 aa20.58■□□□□ 0.89
PPFIA3-201ENST00000334186 KIAA1211Q6ZU35 1233 aa20.57■□□□□ 0.88
PPFIA3-201ENST00000334186 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
PPFIA3-201ENST00000334186 DDX11L8A8MPP1 907 aa20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 APAF1O14727 1248 aa20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 FAM69CQ0P6D2 419 aa20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 CRBNQ96SW2 442 aa20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 CDK13Q14004 1512 aaKnown RBP20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 TAOK2Q9UL54 1235 aa20.56■□□□□ 0.88
PPFIA3-201ENST00000334186 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
PPFIA3-201ENST00000334186 HMMRO75330 724 aa20.55■□□□□ 0.88
PPFIA3-201ENST00000334186 DRC7Q8IY82 874 aa20.55■□□□□ 0.88
PPFIA3-201ENST00000334186 BCL2L13Q9BXK5 485 aa20.53■□□□□ 0.88
PPFIA3-201ENST00000334186 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
PPFIA3-201ENST00000334186 EID1Q9Y6B2 187 aa20.53■□□□□ 0.88
PPFIA3-201ENST00000334186 NGDNQ8NEJ9 315 aaKnown RBP20.53■□□□□ 0.88
PPFIA3-201ENST00000334186 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
PPFIA3-201ENST00000334186 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
PPFIA3-201ENST00000334186 NGEFQ8N5V2 710 aa20.52■□□□□ 0.88
PPFIA3-201ENST00000334186 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
PPFIA3-201ENST00000334186 SYAP1Q96A49 352 aaPredicted RBP20.51■□□□□ 0.87
PPFIA3-201ENST00000334186 MIA2Q96PC5 1412 aa20.51■□□□□ 0.87
PPFIA3-201ENST00000334186 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
PPFIA3-201ENST00000334186 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
PPFIA3-201ENST00000334186 SLC4A10Q6U841 1118 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms