RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ARHGEF12Q9NZN5 1544 aa18.29■□□□□ 0.52
TUBA1B-201ENST00000332858 ARID4BQ4LE39 1312 aaPredicted RBP18.29■□□□□ 0.52
TUBA1B-201ENST00000332858 SYCP2Q9BX26 1530 aa18.28■□□□□ 0.52
TUBA1B-201ENST00000332858 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
TUBA1B-201ENST00000332858 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
TUBA1B-201ENST00000332858 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
TUBA1B-201ENST00000332858 PNISRQ8TF01 805 aaKnown RBP18.28■□□□□ 0.52
TUBA1B-201ENST00000332858 TTC37Q6PGP7 1564 aa18.27■□□□□ 0.52
TUBA1B-201ENST00000332858 CHD1O14646 1710 aa18.27■□□□□ 0.51
TUBA1B-201ENST00000332858 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
TUBA1B-201ENST00000332858 PLA2R1Q13018 1463 aa18.25■□□□□ 0.51
TUBA1B-201ENST00000332858 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
TUBA1B-201ENST00000332858 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
TUBA1B-201ENST00000332858 ARHGAP5Q13017 1502 aa18.24■□□□□ 0.51
TUBA1B-201ENST00000332858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.516e-33■■■□□ 18
TUBA1B-201ENST00000332858 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
TUBA1B-201ENST00000332858 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
TUBA1B-201ENST00000332858 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
TUBA1B-201ENST00000332858 MSH5O43196 834 aa18.23■□□□□ 0.51
TUBA1B-201ENST00000332858 PLEKHH2Q8IVE3 1493 aa18.22■□□□□ 0.51
TUBA1B-201ENST00000332858 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
TUBA1B-201ENST00000332858 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
TUBA1B-201ENST00000332858 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
TUBA1B-201ENST00000332858 A2MP01023 1474 aa18.17■□□□□ 0.5
TUBA1B-201ENST00000332858 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
TUBA1B-201ENST00000332858 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
TUBA1B-201ENST00000332858 MYBBP1AQ9BQG0 1328 aaKnown RBP18.15■□□□□ 0.5
TUBA1B-201ENST00000332858 ABCC2Q92887 1545 aa18.15■□□□□ 0.5
TUBA1B-201ENST00000332858 UNC13BO14795 1591 aa18.14■□□□□ 0.49
TUBA1B-201ENST00000332858 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
TUBA1B-201ENST00000332858 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
TUBA1B-201ENST00000332858 PER1O15534 1290 aaPredicted RBP18.14■□□□□ 0.49
TUBA1B-201ENST00000332858 MAST1Q9Y2H9 1570 aa18.13■□□□□ 0.49
TUBA1B-201ENST00000332858 RALBP1Q15311 655 aa18.13■□□□□ 0.49
TUBA1B-201ENST00000332858 TESK2Q96S53 571 aa18.13■□□□□ 0.49
TUBA1B-201ENST00000332858 E9PCH4 1651 aa18.12■□□□□ 0.49
TUBA1B-201ENST00000332858 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
TUBA1B-201ENST00000332858 DISP3Q9P2K9 1392 aa18.12■□□□□ 0.49
TUBA1B-201ENST00000332858 MYO5CQ9NQX4 1742 aa18.12■□□□□ 0.49
TUBA1B-201ENST00000332858 BRD4O60885 1362 aaPredicted RBP18.12■□□□□ 0.49
TUBA1B-201ENST00000332858 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
TUBA1B-201ENST00000332858 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
TUBA1B-201ENST00000332858 TRAPPC8Q9Y2L5 1435 aa18.09■□□□□ 0.49
TUBA1B-201ENST00000332858 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
TUBA1B-201ENST00000332858 FANCIQ9NVI1 1328 aa18.09■□□□□ 0.49
TUBA1B-201ENST00000332858 PLXNC1O60486 1568 aa18.08■□□□□ 0.49
TUBA1B-201ENST00000332858 PLCH2O75038 1416 aa18.08■□□□□ 0.49
TUBA1B-201ENST00000332858 AFAP1Q8N556 730 aa18.07■□□□□ 0.48
TUBA1B-201ENST00000332858 PARD3Q8TEW0 1356 aa18.07■□□□□ 0.48
TUBA1B-201ENST00000332858 EFCAB2Q5VUJ9 269 aa18.07■□□□□ 0.48
TUBA1B-201ENST00000332858 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
TUBA1B-201ENST00000332858 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
TUBA1B-201ENST00000332858 PANK3Q9H999 370 aa18.06■□□□□ 0.48
TUBA1B-201ENST00000332858 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
TUBA1B-201ENST00000332858 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
TUBA1B-201ENST00000332858 COL17A1Q9UMD9 1497 aaPredicted RBP18.04■□□□□ 0.48
TUBA1B-201ENST00000332858 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
TUBA1B-201ENST00000332858 CCDC136Q96JN2 1154 aa18.04■□□□□ 0.48
TUBA1B-201ENST00000332858 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
TUBA1B-201ENST00000332858 ERBINQ96RT1 1412 aa18.03■□□□□ 0.48
TUBA1B-201ENST00000332858 ATP10AO60312 1499 aa18.02■□□□□ 0.48
TUBA1B-201ENST00000332858 CDCA7LQ96GN5 454 aa18.01■□□□□ 0.47
TUBA1B-201ENST00000332858 BCL11AQ9H165 835 aa18.01■□□□□ 0.47
TUBA1B-201ENST00000332858 ABCC1P33527 1531 aa18■□□□□ 0.47
TUBA1B-201ENST00000332858 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
TUBA1B-201ENST00000332858 TMF1P82094 1093 aa17.99■□□□□ 0.47
TUBA1B-201ENST00000332858 LAMC1P11047 1609 aa17.97■□□□□ 0.47
TUBA1B-201ENST00000332858 RRP1P56182 461 aaKnown RBP17.96■□□□□ 0.47
TUBA1B-201ENST00000332858 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
TUBA1B-201ENST00000332858 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
TUBA1B-201ENST00000332858 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
TUBA1B-201ENST00000332858 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
TUBA1B-201ENST00000332858 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
TUBA1B-201ENST00000332858 WASHC2CQ9Y4E1 1318 aa17.93■□□□□ 0.46
TUBA1B-201ENST00000332858 ZFYVE16Q7Z3T8 1539 aa17.91■□□□□ 0.46
TUBA1B-201ENST00000332858 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
TUBA1B-201ENST00000332858 WDR7Q9Y4E6 1490 aa17.91■□□□□ 0.46
TUBA1B-201ENST00000332858 PLIN1O60240 522 aa17.9■□□□□ 0.46
TUBA1B-201ENST00000332858 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
TUBA1B-201ENST00000332858 MADDQ8WXG6 1647 aa17.9■□□□□ 0.46
TUBA1B-201ENST00000332858 KIF3BO15066 747 aa17.89■□□□□ 0.46
TUBA1B-201ENST00000332858 MYT1LQ9UL68 1186 aa17.89■□□□□ 0.46
TUBA1B-201ENST00000332858 PDE3BQ13370 1112 aa17.88■□□□□ 0.45
TUBA1B-201ENST00000332858 RTEL1-TNFRSF6BF6WH68 1400 aa17.88■□□□□ 0.45
TUBA1B-201ENST00000332858 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
TUBA1B-201ENST00000332858 PTPRTO14522 1441 aa17.88■□□□□ 0.45
TUBA1B-201ENST00000332858 TRPM2O94759 1503 aa17.87■□□□□ 0.45
TUBA1B-201ENST00000332858 AMER1Q5JTC6 1135 aaPredicted RBP17.87■□□□□ 0.45
TUBA1B-201ENST00000332858 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
TUBA1B-201ENST00000332858 SCAPERQ9BY12 1400 aa17.86■□□□□ 0.45
TUBA1B-201ENST00000332858 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
TUBA1B-201ENST00000332858 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
TUBA1B-201ENST00000332858 FANCAO15360 1455 aa17.85■□□□□ 0.45
TUBA1B-201ENST00000332858 SPHKAPQ2M3C7 1700 aa17.84■□□□□ 0.45
TUBA1B-201ENST00000332858 IQGAP1P46940 1657 aa17.84■□□□□ 0.45
TUBA1B-201ENST00000332858 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
TUBA1B-201ENST00000332858 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
TUBA1B-201ENST00000332858 CFAP70Q5T0N1 1121 aa17.83■□□□□ 0.45
TUBA1B-201ENST00000332858 SCAF11Q99590 1463 aaKnown RBP17.83■□□□□ 0.44
TUBA1B-201ENST00000332858 CEP152O94986 1710 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms