RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 E9PCH4 1651 aa19.34■□□□□ 0.69
SRPRA-201ENST00000332118 CCER2I3L3R5 266 aa19.33■□□□□ 0.69
SRPRA-201ENST00000332118 RNF17Q9BXT8 1623 aaKnown RBP19.33■□□□□ 0.68
SRPRA-201ENST00000332118 KIDINS220Q9ULH0 1771 aa19.33■□□□□ 0.68
SRPRA-201ENST00000332118 CEP152O94986 1710 aa19.32■□□□□ 0.68
SRPRA-201ENST00000332118 EIF4G2P78344 907 aaKnown RBP eCLIP19.31■□□□□ 0.68
SRPRA-201ENST00000332118 TRPM2O94759 1503 aa19.31■□□□□ 0.68
SRPRA-201ENST00000332118 HSPA5P11021 654 aaKnown RBP19.31■□□□□ 0.68
SRPRA-201ENST00000332118 SPHKAPQ2M3C7 1700 aa19.3■□□□□ 0.68
SRPRA-201ENST00000332118 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
SRPRA-201ENST00000332118 LMTK2Q8IWU2 1503 aa19.29■□□□□ 0.68
SRPRA-201ENST00000332118 ADGRL1O94910 1474 aa19.29■□□□□ 0.68
SRPRA-201ENST00000332118 PTPRTO14522 1441 aa19.28■□□□□ 0.68
SRPRA-201ENST00000332118 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
SRPRA-201ENST00000332118 ARID4BQ4LE39 1312 aaPredicted RBP19.27■□□□□ 0.68
SRPRA-201ENST00000332118 GLI2P10070 1586 aa19.27■□□□□ 0.68
SRPRA-201ENST00000332118 MAP3K4Q9Y6R4 1608 aa19.27■□□□□ 0.68
SRPRA-201ENST00000332118 DDX10Q13206 875 aaKnown RBP19.27■□□□□ 0.68
SRPRA-201ENST00000332118 CCDC7Q96M83 1385 aa19.26■□□□□ 0.67
SRPRA-201ENST00000332118 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
SRPRA-201ENST00000332118 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
SRPRA-201ENST00000332118 KCNH8Q96L42 1107 aa19.25■□□□□ 0.67
SRPRA-201ENST00000332118 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
SRPRA-201ENST00000332118 PRAG1Q86YV5 1406 aa19.24■□□□□ 0.67
SRPRA-201ENST00000332118 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
SRPRA-201ENST00000332118 CCDC144AA2RUR9 1427 aa19.24■□□□□ 0.67
SRPRA-201ENST00000332118 A2MP01023 1474 aa19.23■□□□□ 0.67
SRPRA-201ENST00000332118 NEO1Q92859 1461 aa19.23■□□□□ 0.67
SRPRA-201ENST00000332118 HECW2Q9P2P5 1572 aa19.22■□□□□ 0.67
SRPRA-201ENST00000332118 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
SRPRA-201ENST00000332118 SPAG9O60271 1321 aaKnown RBP19.2■□□□□ 0.66
SRPRA-201ENST00000332118 FRMPD1Q5SYB0 1578 aa19.2■□□□□ 0.66
SRPRA-201ENST00000332118 KIAA1210Q9ULL0 1709 aa19.2■□□□□ 0.66
SRPRA-201ENST00000332118 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
SRPRA-201ENST00000332118 SCAPERQ9BY12 1400 aa19.19■□□□□ 0.66
SRPRA-201ENST00000332118 EFCAB6Q5THR3 1501 aa19.19■□□□□ 0.66
SRPRA-201ENST00000332118 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
SRPRA-201ENST00000332118 IFT172Q9UG01 1749 aa19.18■□□□□ 0.66
SRPRA-201ENST00000332118 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
SRPRA-201ENST00000332118 USP47Q96K76 1375 aa19.18■□□□□ 0.66
SRPRA-201ENST00000332118 HIRIP3Q9BW71 556 aaPredicted RBP19.17■□□□□ 0.66
SRPRA-201ENST00000332118 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
SRPRA-201ENST00000332118 ANP32CO43423 234 aa19.15■□□□□ 0.66
SRPRA-201ENST00000332118 C11orf95C9JLR9 678 aaPredicted RBP19.14■□□□□ 0.66
SRPRA-201ENST00000332118 CD109Q6YHK3 1445 aa19.14■□□□□ 0.66
SRPRA-201ENST00000332118 ABCA6Q8N139 1617 aa19.14■□□□□ 0.65
SRPRA-201ENST00000332118 PPRC1Q5VV67 1664 aaKnown RBP19.14■□□□□ 0.65
SRPRA-201ENST00000332118 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
SRPRA-201ENST00000332118 KIF7Q2M1P5 1343 aa19.13■□□□□ 0.65
SRPRA-201ENST00000332118 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
SRPRA-201ENST00000332118 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
SRPRA-201ENST00000332118 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
SRPRA-201ENST00000332118 AFAP1Q8N556 730 aa19.11■□□□□ 0.65
SRPRA-201ENST00000332118 STAC3Q96MF2 364 aa19.11■□□□□ 0.65
SRPRA-201ENST00000332118 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
SRPRA-201ENST00000332118 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
SRPRA-201ENST00000332118 ZMYM4Q5VZL5 1548 aa19.09■□□□□ 0.65
SRPRA-201ENST00000332118 MYOM2P54296 1465 aa19.08■□□□□ 0.64
SRPRA-201ENST00000332118 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.64
SRPRA-201ENST00000332118 KIF1BO60333 1816 aa19.06■□□□□ 0.64
SRPRA-201ENST00000332118 NRXN1Q9ULB1 1477 aa19.06■□□□□ 0.64
SRPRA-201ENST00000332118 KANK1Q14678 1352 aa19.05■□□□□ 0.64
SRPRA-201ENST00000332118 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
SRPRA-201ENST00000332118 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
SRPRA-201ENST00000332118 REREQ9P2R6 1566 aa19.05■□□□□ 0.64
SRPRA-201ENST00000332118 PIK3C2BO00750 1634 aa19.04■□□□□ 0.64
SRPRA-201ENST00000332118 ADGRB3O60242 1522 aa19.04■□□□□ 0.64
SRPRA-201ENST00000332118 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
SRPRA-201ENST00000332118 CAMSAP1Q5T5Y3 1602 aa19.03■□□□□ 0.64
SRPRA-201ENST00000332118 MROH2AA6NES4 1674 aa19.02■□□□□ 0.64
SRPRA-201ENST00000332118 DCAF11Q8TEB1 546 aa19.01■□□□□ 0.63
SRPRA-201ENST00000332118 ABCC3O15438 1527 aa19■□□□□ 0.63
SRPRA-201ENST00000332118 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
SRPRA-201ENST00000332118 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
SRPRA-201ENST00000332118 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
SRPRA-201ENST00000332118 PPLO60437 1756 aa18.98■□□□□ 0.63
SRPRA-201ENST00000332118 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
SRPRA-201ENST00000332118 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
SRPRA-201ENST00000332118 ARHGAP31Q2M1Z3 1444 aa18.96■□□□□ 0.63
SRPRA-201ENST00000332118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.96■□□□□ 0.636e-7■■□□□ 14.4
SRPRA-201ENST00000332118 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
SRPRA-201ENST00000332118 NOS1P29475 1434 aa18.92■□□□□ 0.62
SRPRA-201ENST00000332118 NPATQ14207 1427 aa18.91■□□□□ 0.62
SRPRA-201ENST00000332118 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
SRPRA-201ENST00000332118 TESK2Q96S53 571 aa18.9■□□□□ 0.62
SRPRA-201ENST00000332118 KIF3BO15066 747 aa18.89■□□□□ 0.62
SRPRA-201ENST00000332118 SYNMO15061 1565 aa18.89■□□□□ 0.62
SRPRA-201ENST00000332118 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.62
SRPRA-201ENST00000332118 AGLP35573 1532 aa18.89■□□□□ 0.62
SRPRA-201ENST00000332118 ST20-MTHFSA0A0A6YYL1 179 aa18.89■□□□□ 0.61
SRPRA-201ENST00000332118 MYOM1P52179 1685 aa18.89■□□□□ 0.61
SRPRA-201ENST00000332118 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
SRPRA-201ENST00000332118 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
SRPRA-201ENST00000332118 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
SRPRA-201ENST00000332118 NBPF1Q3BBV0 1214 aa18.85■□□□□ 0.61
SRPRA-201ENST00000332118 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SRPRA-201ENST00000332118 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
SRPRA-201ENST00000332118 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
SRPRA-201ENST00000332118 INSRP06213 1382 aa18.82■□□□□ 0.6
SRPRA-201ENST00000332118 ADGRB1O14514 1584 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms