RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MYT1LQ9UL68 1186 aa23.98■■□□□ 1.43
DDX41-201ENST00000330503 DEPDC5O75140 1603 aa23.96■■□□□ 1.43
DDX41-201ENST00000330503 POGZQ7Z3K3 1410 aa23.96■■□□□ 1.43
DDX41-201ENST00000330503 UHRF1BP1Q6BDS2 1440 aa23.95■■□□□ 1.42
DDX41-201ENST00000330503 ATP10AO60312 1499 aa23.94■■□□□ 1.42
DDX41-201ENST00000330503 NEO1Q92859 1461 aa23.94■■□□□ 1.42
DDX41-201ENST00000330503 KDM5CP41229 1560 aa23.94■■□□□ 1.42
DDX41-201ENST00000330503 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
DDX41-201ENST00000330503 KIF3BO15066 747 aa23.92■■□□□ 1.42
DDX41-201ENST00000330503 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
DDX41-201ENST00000330503 GLI2P10070 1586 aa23.92■■□□□ 1.42
DDX41-201ENST00000330503 SPATA31E1Q6ZUB1 1445 aa23.91■■□□□ 1.42
DDX41-201ENST00000330503 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
DDX41-201ENST00000330503 MLH3Q9UHC1 1453 aa23.9■■□□□ 1.42
DDX41-201ENST00000330503 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
DDX41-201ENST00000330503 ZNF326Q5BKZ1 582 aaKnown RBP23.89■■□□□ 1.42
DDX41-201ENST00000330503 E9PCH4 1651 aa23.89■■□□□ 1.41
DDX41-201ENST00000330503 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.41
DDX41-201ENST00000330503 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
DDX41-201ENST00000330503 WASHC2AQ641Q2 1341 aa23.87■■□□□ 1.41
DDX41-201ENST00000330503 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
DDX41-201ENST00000330503 A2MP01023 1474 aa23.86■■□□□ 1.41
DDX41-201ENST00000330503 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
DDX41-201ENST00000330503 RAPGEF3O95398 923 aa23.86■■□□□ 1.41
DDX41-201ENST00000330503 YTHDC1Q96MU7 727 aaKnown RBP23.85■■□□□ 1.41
DDX41-201ENST00000330503 KANK1Q14678 1352 aa23.85■■□□□ 1.41
DDX41-201ENST00000330503 HECW2Q9P2P5 1572 aa23.84■■□□□ 1.41
DDX41-201ENST00000330503 PRDM15P57071 1507 aaPredicted RBP23.84■■□□□ 1.41
DDX41-201ENST00000330503 TET3O43151 1660 aa23.84■■□□□ 1.41
DDX41-201ENST00000330503 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.41
DDX41-201ENST00000330503 RGL3Q3MIN7 710 aa23.83■■□□□ 1.4
DDX41-201ENST00000330503 FAM69CQ0P6D2 419 aa23.82■■□□□ 1.4
DDX41-201ENST00000330503 PTPRTO14522 1441 aa23.82■■□□□ 1.4
DDX41-201ENST00000330503 FRMPD1Q5SYB0 1578 aa23.81■■□□□ 1.4
DDX41-201ENST00000330503 DIP2BQ9P265 1576 aa23.8■■□□□ 1.4
DDX41-201ENST00000330503 CENPBP07199 599 aaPredicted RBP23.8■■□□□ 1.4
DDX41-201ENST00000330503 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
DDX41-201ENST00000330503 RICTORQ6R327 1708 aa23.78■■□□□ 1.4
DDX41-201ENST00000330503 TRPM2O94759 1503 aa23.78■■□□□ 1.4
DDX41-201ENST00000330503 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
DDX41-201ENST00000330503 USP47Q96K76 1375 aa23.77■■□□□ 1.4
DDX41-201ENST00000330503 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
DDX41-201ENST00000330503 PRAG1Q86YV5 1406 aa23.77■■□□□ 1.4
DDX41-201ENST00000330503 SPHKAPQ2M3C7 1700 aa23.76■■□□□ 1.39
DDX41-201ENST00000330503 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
DDX41-201ENST00000330503 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
DDX41-201ENST00000330503 BCORL1Q5H9F3 1711 aa23.72■■□□□ 1.39
DDX41-201ENST00000330503 CLTCL1P53675 1640 aa23.72■■□□□ 1.39
DDX41-201ENST00000330503 DIP2CQ9Y2E4 1556 aa23.71■■□□□ 1.39
DDX41-201ENST00000330503 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
DDX41-201ENST00000330503 ANP32CO43423 234 aa23.71■■□□□ 1.39
DDX41-201ENST00000330503 TRPM1Q7Z4N2 1603 aa23.71■■□□□ 1.39
DDX41-201ENST00000330503 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
DDX41-201ENST00000330503 PPRC1Q5VV67 1664 aaKnown RBP23.7■■□□□ 1.38
DDX41-201ENST00000330503 POLR1AO95602 1720 aaPredicted RBP23.69■■□□□ 1.38
DDX41-201ENST00000330503 CEP152O94986 1710 aa23.69■■□□□ 1.38
DDX41-201ENST00000330503 GGT6Q6P531 493 aa23.68■■□□□ 1.38
DDX41-201ENST00000330503 ROCK2O75116 1388 aaKnown RBP23.67■■□□□ 1.38
DDX41-201ENST00000330503 NBPF1Q3BBV0 1214 aa23.67■■□□□ 1.38
DDX41-201ENST00000330503 YEATS2Q9ULM3 1422 aa23.67■■□□□ 1.38
DDX41-201ENST00000330503 TSPOAP1O95153 1857 aa23.67■■□□□ 1.38
DDX41-201ENST00000330503 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
DDX41-201ENST00000330503 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
DDX41-201ENST00000330503 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
DDX41-201ENST00000330503 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
DDX41-201ENST00000330503 ABCC3O15438 1527 aa23.61■■□□□ 1.37
DDX41-201ENST00000330503 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
DDX41-201ENST00000330503 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
DDX41-201ENST00000330503 NPATQ14207 1427 aa23.6■■□□□ 1.37
DDX41-201ENST00000330503 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
DDX41-201ENST00000330503 WASHC2CQ9Y4E1 1318 aa23.6■■□□□ 1.37
DDX41-201ENST00000330503 NEURL4Q96JN8 1562 aa23.6■■□□□ 1.37
DDX41-201ENST00000330503 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
DDX41-201ENST00000330503 LAMC1P11047 1609 aa23.58■■□□□ 1.37
DDX41-201ENST00000330503 STAC3Q96MF2 364 aa23.58■■□□□ 1.37
DDX41-201ENST00000330503 KIF13AQ9H1H9 1805 aa23.58■■□□□ 1.37
DDX41-201ENST00000330503 MADDQ8WXG6 1647 aa23.57■■□□□ 1.36
DDX41-201ENST00000330503 KIF1BO60333 1816 aa23.53■■□□□ 1.36
DDX41-201ENST00000330503 CFAP65Q6ZU64 1925 aaKnown RBP23.53■■□□□ 1.36
DDX41-201ENST00000330503 CAMSAP1Q5T5Y3 1602 aa23.53■■□□□ 1.36
DDX41-201ENST00000330503 POLR3GLQ9BT43 218 aa23.5■■□□□ 1.35
DDX41-201ENST00000330503 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
DDX41-201ENST00000330503 MROH2AA6NES4 1674 aa23.49■■□□□ 1.35
DDX41-201ENST00000330503 NOS1P29475 1434 aa23.49■■□□□ 1.35
DDX41-201ENST00000330503 SIGLEC1Q9BZZ2 1709 aa23.49■■□□□ 1.35
DDX41-201ENST00000330503 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
DDX41-201ENST00000330503 ARHGAP31Q2M1Z3 1444 aa23.47■■□□□ 1.35
DDX41-201ENST00000330503 TESK2Q96S53 571 aa23.47■■□□□ 1.35
DDX41-201ENST00000330503 ADGRB3O60242 1522 aa23.46■■□□□ 1.35
DDX41-201ENST00000330503 ZC3H13Q5T200 1668 aaKnown RBP23.46■■□□□ 1.35
DDX41-201ENST00000330503 IFT172Q9UG01 1749 aa23.46■■□□□ 1.35
DDX41-201ENST00000330503 MYOM2P54296 1465 aa23.45■■□□□ 1.35
DDX41-201ENST00000330503 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.34
DDX41-201ENST00000330503 REREQ9P2R6 1566 aa23.45■■□□□ 1.34
DDX41-201ENST00000330503 SYNMO15061 1565 aa23.42■■□□□ 1.34
DDX41-201ENST00000330503 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
DDX41-201ENST00000330503 KIAA1210Q9ULL0 1709 aa23.42■■□□□ 1.34
DDX41-201ENST00000330503 GTF3C3Q9Y5Q9 886 aa23.41■■□□□ 1.34
DDX41-201ENST00000330503 AGLP35573 1532 aa23.41■■□□□ 1.34
DDX41-201ENST00000330503 IQGAP1P46940 1657 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms