RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 RALGAPBQ86X10 1494 aa20.96■□□□□ 0.95
BRCC3-201ENST00000330045 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
BRCC3-201ENST00000330045 POLR3GLQ9BT43 218 aa20.96■□□□□ 0.95
BRCC3-201ENST00000330045 ASXL2Q76L83 1435 aa20.95■□□□□ 0.94
BRCC3-201ENST00000330045 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
BRCC3-201ENST00000330045 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
BRCC3-201ENST00000330045 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
BRCC3-201ENST00000330045 CARD11Q9BXL7 1154 aa20.89■□□□□ 0.94
BRCC3-201ENST00000330045 ROCK2O75116 1388 aaKnown RBP20.89■□□□□ 0.93
BRCC3-201ENST00000330045 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
BRCC3-201ENST00000330045 FANCIQ9NVI1 1328 aa20.87■□□□□ 0.93
BRCC3-201ENST00000330045 ABCC1P33527 1531 aa20.86■□□□□ 0.93
BRCC3-201ENST00000330045 SMG6Q86US8 1419 aaKnown RBP20.86■□□□□ 0.93
BRCC3-201ENST00000330045 NPM1P06748 294 aaKnown RBP eCLIP20.85■□□□□ 0.93
BRCC3-201ENST00000330045 RSPH4AQ5TD94 716 aa20.85■□□□□ 0.93
BRCC3-201ENST00000330045 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
BRCC3-201ENST00000330045 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
BRCC3-201ENST00000330045 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
BRCC3-201ENST00000330045 MSH5O43196 834 aa20.84■□□□□ 0.93
BRCC3-201ENST00000330045 ABCA9Q8IUA7 1624 aa20.83■□□□□ 0.92
BRCC3-201ENST00000330045 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
BRCC3-201ENST00000330045 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
BRCC3-201ENST00000330045 FANCAO15360 1455 aa20.82■□□□□ 0.92
BRCC3-201ENST00000330045 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
BRCC3-201ENST00000330045 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
BRCC3-201ENST00000330045 ST20-MTHFSA0A0A6YYL1 179 aa20.81■□□□□ 0.92
BRCC3-201ENST00000330045 MAST1Q9Y2H9 1570 aa20.81■□□□□ 0.92
BRCC3-201ENST00000330045 TMC1Q8TDI8 760 aa20.8■□□□□ 0.92
BRCC3-201ENST00000330045 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
BRCC3-201ENST00000330045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.8■□□□□ 0.92
BRCC3-201ENST00000330045 E9PCH4 1651 aa20.79■□□□□ 0.92
BRCC3-201ENST00000330045 UNC13BO14795 1591 aa20.76■□□□□ 0.91
BRCC3-201ENST00000330045 RNF123Q5XPI4 1314 aa20.76■□□□□ 0.91
BRCC3-201ENST00000330045 ARAP3Q8WWN8 1544 aa20.75■□□□□ 0.91
BRCC3-201ENST00000330045 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
BRCC3-201ENST00000330045 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 SCAPERQ9BY12 1400 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 KTN1Q86UP2 1357 aaKnown RBP20.74■□□□□ 0.91
BRCC3-201ENST00000330045 RIMBP3CA6NJZ7 1639 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 RIMBP3BA6NNM3 1639 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 RIMBP3Q9UFD9 1639 aa20.74■□□□□ 0.91
BRCC3-201ENST00000330045 ADGRL1O94910 1474 aa20.73■□□□□ 0.91
BRCC3-201ENST00000330045 RALBP1Q15311 655 aa20.73■□□□□ 0.91
BRCC3-201ENST00000330045 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
BRCC3-201ENST00000330045 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
BRCC3-201ENST00000330045 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
BRCC3-201ENST00000330045 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
BRCC3-201ENST00000330045 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.91
BRCC3-201ENST00000330045 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
BRCC3-201ENST00000330045 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
BRCC3-201ENST00000330045 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
BRCC3-201ENST00000330045 PLA2R1Q13018 1463 aa20.69■□□□□ 0.9
BRCC3-201ENST00000330045 DUOX2Q9NRD8 1548 aa20.69■□□□□ 0.9
BRCC3-201ENST00000330045 SENP3-EIF4A1A0A087X0R7 540 aa20.68■□□□□ 0.9
BRCC3-201ENST00000330045 IQGAP3Q86VI3 1631 aa20.68■□□□□ 0.9
BRCC3-201ENST00000330045 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
BRCC3-201ENST00000330045 LAMC1P11047 1609 aa20.67■□□□□ 0.9
BRCC3-201ENST00000330045 GPRASP1Q5JY77 1395 aa20.66■□□□□ 0.9
BRCC3-201ENST00000330045 RGL3Q3MIN7 710 aa20.65■□□□□ 0.9
BRCC3-201ENST00000330045 A2MP01023 1474 aa20.65■□□□□ 0.9
BRCC3-201ENST00000330045 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
BRCC3-201ENST00000330045 ERBINQ96RT1 1412 aa20.64■□□□□ 0.89
BRCC3-201ENST00000330045 ATP7AQ04656 1500 aa20.63■□□□□ 0.89
BRCC3-201ENST00000330045 MAGI2Q86UL8 1455 aa20.63■□□□□ 0.89
BRCC3-201ENST00000330045 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
BRCC3-201ENST00000330045 INO80Q9ULG1 1556 aaPredicted RBP20.62■□□□□ 0.89
BRCC3-201ENST00000330045 PRDM15P57071 1507 aaPredicted RBP20.62■□□□□ 0.89
BRCC3-201ENST00000330045 RTEL1-TNFRSF6BF6WH68 1400 aa20.62■□□□□ 0.89
BRCC3-201ENST00000330045 ATP10AO60312 1499 aa20.61■□□□□ 0.89
BRCC3-201ENST00000330045 NLRP13Q86W25 1043 aa20.61■□□□□ 0.89
BRCC3-201ENST00000330045 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
BRCC3-201ENST00000330045 COL17A1Q9UMD9 1497 aaPredicted RBP20.6■□□□□ 0.89
BRCC3-201ENST00000330045 EIF2AK4Q9P2K8 1649 aaKnown RBP20.59■□□□□ 0.89
BRCC3-201ENST00000330045 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
BRCC3-201ENST00000330045 PER1O15534 1290 aaPredicted RBP20.58■□□□□ 0.88
BRCC3-201ENST00000330045 KIF3BO15066 747 aa20.57■□□□□ 0.88
BRCC3-201ENST00000330045 KIDINS220Q9ULH0 1771 aa20.56■□□□□ 0.88
BRCC3-201ENST00000330045 TESK2Q96S53 571 aa20.54■□□□□ 0.88
BRCC3-201ENST00000330045 POGZQ7Z3K3 1410 aa20.54■□□□□ 0.88
BRCC3-201ENST00000330045 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
BRCC3-201ENST00000330045 ZNF518AQ6AHZ1 1483 aa20.54■□□□□ 0.88
BRCC3-201ENST00000330045 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
BRCC3-201ENST00000330045 RRP1P56182 461 aaKnown RBP20.52■□□□□ 0.88
BRCC3-201ENST00000330045 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
BRCC3-201ENST00000330045 FAM69CQ0P6D2 419 aa20.52■□□□□ 0.88
BRCC3-201ENST00000330045 PDE3BQ13370 1112 aa20.52■□□□□ 0.88
BRCC3-201ENST00000330045 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
BRCC3-201ENST00000330045 RCAN3Q9UKA8 241 aa20.5■□□□□ 0.87
BRCC3-201ENST00000330045 TMF1P82094 1093 aa20.49■□□□□ 0.87
BRCC3-201ENST00000330045 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
BRCC3-201ENST00000330045 PANK3Q9H999 370 aa20.49■□□□□ 0.87
BRCC3-201ENST00000330045 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
BRCC3-201ENST00000330045 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
BRCC3-201ENST00000330045 INSRP06213 1382 aa20.47■□□□□ 0.87
BRCC3-201ENST00000330045 DEPDC5O75140 1603 aa20.47■□□□□ 0.87
BRCC3-201ENST00000330045 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
BRCC3-201ENST00000330045 CFAP74Q9C0B2 1584 aa20.47■□□□□ 0.87
BRCC3-201ENST00000330045 FRMPD1Q5SYB0 1578 aa20.45■□□□□ 0.86
BRCC3-201ENST00000330045 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms