RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ACIN1Q9UKV3 1341 aaKnown RBP27.6■■■□□ 2.01
EXOSC3-201ENST00000327304 DEPDC5O75140 1603 aa27.6■■■□□ 2.01
EXOSC3-201ENST00000327304 CLSPNQ9HAW4 1339 aa27.6■■■□□ 2.01
EXOSC3-201ENST00000327304 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
EXOSC3-201ENST00000327304 SIGLEC1Q9BZZ2 1709 aa27.6■■■□□ 2.01
EXOSC3-201ENST00000327304 NUP155O75694 1391 aa27.59■■■□□ 2.01
EXOSC3-201ENST00000327304 KDM5DQ9BY66 1539 aa27.59■■■□□ 2.01
EXOSC3-201ENST00000327304 PZPP20742 1482 aa27.59■■■□□ 2.01
EXOSC3-201ENST00000327304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.01
EXOSC3-201ENST00000327304 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
EXOSC3-201ENST00000327304 RNF17Q9BXT8 1623 aaKnown RBP27.57■■■□□ 2
EXOSC3-201ENST00000327304 AGLP35573 1532 aa27.54■■■□□ 2
EXOSC3-201ENST00000327304 PRDM15P57071 1507 aaPredicted RBP27.53■■■□□ 2
EXOSC3-201ENST00000327304 MPHOSPH9Q99550 1183 aa27.53■■■□□ 2
EXOSC3-201ENST00000327304 IQGAP3Q86VI3 1631 aa27.52■■■□□ 2
EXOSC3-201ENST00000327304 FAM135AQ9P2D6 1515 aa27.52■■■□□ 2
EXOSC3-201ENST00000327304 SLC4A1APQ9BWU0 796 aaKnown RBP27.51■■□□□ 1.99
EXOSC3-201ENST00000327304 VWDEQ8N2E2 1590 aa27.49■■□□□ 1.99
EXOSC3-201ENST00000327304 GGT6Q6P531 493 aa27.49■■□□□ 1.99
EXOSC3-201ENST00000327304 KANK1Q14678 1352 aa27.46■■□□□ 1.99
EXOSC3-201ENST00000327304 FOXD1Q16676 465 aa27.43■■□□□ 1.98
EXOSC3-201ENST00000327304 PKD2Q13563 968 aa27.42■■□□□ 1.98
EXOSC3-201ENST00000327304 ARID4BQ4LE39 1312 aaPredicted RBP27.42■■□□□ 1.98
EXOSC3-201ENST00000327304 CEP152O94986 1710 aa27.41■■□□□ 1.98
EXOSC3-201ENST00000327304 ABCC3O15438 1527 aa27.39■■□□□ 1.98
EXOSC3-201ENST00000327304 MLECQ14165 292 aa27.39■■□□□ 1.98
EXOSC3-201ENST00000327304 TET3O43151 1660 aa27.39■■□□□ 1.97
EXOSC3-201ENST00000327304 LMTK2Q8IWU2 1503 aa27.38■■□□□ 1.97
EXOSC3-201ENST00000327304 WASHC2CQ9Y4E1 1318 aa27.36■■□□□ 1.97
EXOSC3-201ENST00000327304 E9PCH4 1651 aa27.34■■□□□ 1.97
EXOSC3-201ENST00000327304 ZC3H13Q5T200 1668 aaKnown RBP27.34■■□□□ 1.97
EXOSC3-201ENST00000327304 EFCAB6Q5THR3 1501 aa27.34■■□□□ 1.97
EXOSC3-201ENST00000327304 ANKRD30BQ9BXX2 1392 aa27.31■■□□□ 1.96
EXOSC3-201ENST00000327304 CAMSAP1Q5T5Y3 1602 aa27.31■■□□□ 1.96
EXOSC3-201ENST00000327304 PPP6R1Q9UPN7 881 aa27.3■■□□□ 1.96
EXOSC3-201ENST00000327304 CLTCQ00610 1675 aaKnown RBP27.28■■□□□ 1.96
EXOSC3-201ENST00000327304 SIN3AQ96ST3 1273 aa27.27■■□□□ 1.96
EXOSC3-201ENST00000327304 NPATQ14207 1427 aa27.25■■□□□ 1.95
EXOSC3-201ENST00000327304 PLA2R1Q13018 1463 aa27.24■■□□□ 1.95
EXOSC3-201ENST00000327304 ARHGAP31Q2M1Z3 1444 aa27.22■■□□□ 1.95
EXOSC3-201ENST00000327304 RPRD2Q5VT52 1461 aaKnown RBP27.21■■□□□ 1.95
EXOSC3-201ENST00000327304 NEUROD1Q13562 356 aa27.2■■□□□ 1.95
EXOSC3-201ENST00000327304 SPHKAPQ2M3C7 1700 aa27.2■■□□□ 1.94
EXOSC3-201ENST00000327304 ESF1Q9H501 851 aaKnown RBP27.2■■□□□ 1.94
EXOSC3-201ENST00000327304 PTPRTO14522 1441 aa27.19■■□□□ 1.94
EXOSC3-201ENST00000327304 FER1L4A9Z1Z3 1794 aa27.18■■□□□ 1.94
EXOSC3-201ENST00000327304 CFAP65Q6ZU64 1925 aaKnown RBP27.17■■□□□ 1.94
EXOSC3-201ENST00000327304 TRPM2O94759 1503 aa27.17■■□□□ 1.94
EXOSC3-201ENST00000327304 CNTLNQ9NXG0 1405 aa27.16■■□□□ 1.94
EXOSC3-201ENST00000327304 MROH2AA6NES4 1674 aa27.14■■□□□ 1.93
EXOSC3-201ENST00000327304 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
EXOSC3-201ENST00000327304 ZMYM3Q14202 1370 aa27.13■■□□□ 1.93
EXOSC3-201ENST00000327304 ADAMTSL3P82987 1691 aa27.13■■□□□ 1.93
EXOSC3-201ENST00000327304 CCDC144AA2RUR9 1427 aa27.12■■□□□ 1.93
EXOSC3-201ENST00000327304 NOS1P29475 1434 aa27.12■■□□□ 1.93
EXOSC3-201ENST00000327304 PREX1Q8TCU6 1659 aa27.12■■□□□ 1.93
EXOSC3-201ENST00000327304 FBXO31Q5XUX0 539 aaPredicted RBP27.1■■□□□ 1.93
EXOSC3-201ENST00000327304 UGGT1Q9NYU2 1555 aa27.1■■□□□ 1.93
EXOSC3-201ENST00000327304 CLTCL1P53675 1640 aa27.1■■□□□ 1.93
EXOSC3-201ENST00000327304 ERVK-7P63135 1459 aa27.09■■□□□ 1.93
EXOSC3-201ENST00000327304 SYNMO15061 1565 aa27.09■■□□□ 1.93
EXOSC3-201ENST00000327304 RIMS1Q86UR5 1692 aaKnown RBP27.07■■□□□ 1.92
EXOSC3-201ENST00000327304 C3P01024 1663 aa27.05■■□□□ 1.92
EXOSC3-201ENST00000327304 SPATA31D1Q6ZQQ2 1576 aa27.05■■□□□ 1.92
EXOSC3-201ENST00000327304 TIMELESSQ9UNS1 1208 aa27.04■■□□□ 1.92
EXOSC3-201ENST00000327304 TONSLQ96HA7 1378 aa27.03■■□□□ 1.92
EXOSC3-201ENST00000327304 CEBPAP49715 358 aaPredicted RBP27.02■■□□□ 1.92
EXOSC3-201ENST00000327304 PIK3C2BO00750 1634 aa27.01■■□□□ 1.91
EXOSC3-201ENST00000327304 PLPPR3Q6T4P5 718 aa26.97■■□□□ 1.91
EXOSC3-201ENST00000327304 SPATA31E1Q6ZUB1 1445 aa26.97■■□□□ 1.91
EXOSC3-201ENST00000327304 ZNF316A6NFI3 1004 aaPredicted RBP26.96■■□□□ 1.91
EXOSC3-201ENST00000327304 L3MBTL2Q969R5 705 aa26.96■■□□□ 1.91
EXOSC3-201ENST00000327304 TNRQ92752 1358 aa26.95■■□□□ 1.9
EXOSC3-201ENST00000327304 KIF1BO60333 1816 aa26.94■■□□□ 1.9
EXOSC3-201ENST00000327304 IDI1Q13907 227 aa26.94■■□□□ 1.9
EXOSC3-201ENST00000327304 SLC52A1Q9NWF4 448 aa26.94■■□□□ 1.9
EXOSC3-201ENST00000327304 RGL3Q3MIN7 710 aa26.93■■□□□ 1.9
EXOSC3-201ENST00000327304 ADGRB3O60242 1522 aa26.92■■□□□ 1.9
EXOSC3-201ENST00000327304 NEURL4Q96JN8 1562 aa26.9■■□□□ 1.9
EXOSC3-201ENST00000327304 PTPRMP28827 1452 aa26.89■■□□□ 1.9
EXOSC3-201ENST00000327304 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
EXOSC3-201ENST00000327304 PPP1R15AO75807 674 aaPredicted RBP26.86■■□□□ 1.89
EXOSC3-201ENST00000327304 TMEM131LA2VDJ0 1609 aa26.85■■□□□ 1.89
EXOSC3-201ENST00000327304 KDM4FA0A1W2PPD8 638 aa26.84■■□□□ 1.89
EXOSC3-201ENST00000327304 MYO5BQ9ULV0 1848 aa26.83■■□□□ 1.89
EXOSC3-201ENST00000327304 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
EXOSC3-201ENST00000327304 NLRP1Q9C000 1473 aa26.82■■□□□ 1.88
EXOSC3-201ENST00000327304 ZNF326Q5BKZ1 582 aaKnown RBP26.81■■□□□ 1.88
EXOSC3-201ENST00000327304 MYO3AQ8NEV4 1616 aa26.8■■□□□ 1.88
EXOSC3-201ENST00000327304 KDM2AQ9Y2K7 1162 aa26.8■■□□□ 1.88
EXOSC3-201ENST00000327304 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
EXOSC3-201ENST00000327304 STAG3Q9UJ98 1225 aa26.78■■□□□ 1.88
EXOSC3-201ENST00000327304 IFT172Q9UG01 1749 aa26.77■■□□□ 1.88
EXOSC3-201ENST00000327304 UBR1Q8IWV7 1749 aa26.76■■□□□ 1.87
EXOSC3-201ENST00000327304 NBPF8Q3BBV2 869 aa26.75■■□□□ 1.87
EXOSC3-201ENST00000327304 KDM5AP29375 1690 aaKnown RBP26.74■■□□□ 1.87
EXOSC3-201ENST00000327304 PPLO60437 1756 aa26.74■■□□□ 1.87
EXOSC3-201ENST00000327304 NEXMIFQ5QGS0 1516 aa26.74■■□□□ 1.87
EXOSC3-201ENST00000327304 DIEXFQ68CQ4 756 aaKnown RBP26.73■■□□□ 1.87
EXOSC3-201ENST00000327304 UHRF1BP1Q6BDS2 1440 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms