RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ANKRD50Q9ULJ7 1429 aa19.69■□□□□ 0.74
VARS2-201ENST00000321897 TCERG1O14776 1098 aaKnown RBP19.69■□□□□ 0.74
VARS2-201ENST00000321897 TRIM44Q96DX7 344 aaPredicted RBP19.69■□□□□ 0.74
VARS2-201ENST00000321897 BECN1Q14457 450 aa19.68■□□□□ 0.74
VARS2-201ENST00000321897 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
VARS2-201ENST00000321897 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
VARS2-201ENST00000321897 APAF1O14727 1248 aa19.67■□□□□ 0.74
VARS2-201ENST00000321897 GSE1Q14687 1217 aa19.66■□□□□ 0.74
VARS2-201ENST00000321897 ARID3AQ99856 593 aa19.65■□□□□ 0.74
VARS2-201ENST00000321897 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
VARS2-201ENST00000321897 PEG3Q9GZU2 1588 aa19.64■□□□□ 0.73
VARS2-201ENST00000321897 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
VARS2-201ENST00000321897 MAPK8IP3Q9UPT6 1336 aa19.63■□□□□ 0.73
VARS2-201ENST00000321897 MAPKBP1O60336 1514 aa19.63■□□□□ 0.73
VARS2-201ENST00000321897 GOLGA2Q08379 1002 aa19.62■□□□□ 0.73
VARS2-201ENST00000321897 TMEM132EQ6IEE7 984 aa19.61■□□□□ 0.73
VARS2-201ENST00000321897 APBB1O00213 710 aa19.6■□□□□ 0.73
VARS2-201ENST00000321897 VSIG10Q8N0Z9 540 aa19.6■□□□□ 0.73
VARS2-201ENST00000321897 ADAMTS8Q9UP79 889 aa19.6■□□□□ 0.73
VARS2-201ENST00000321897 KANK1Q14678 1352 aa19.59■□□□□ 0.73
VARS2-201ENST00000321897 ELL2O00472 640 aaPredicted RBP19.57■□□□□ 0.72
VARS2-201ENST00000321897 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
VARS2-201ENST00000321897 CFAP70Q5T0N1 1121 aa19.56■□□□□ 0.72
VARS2-201ENST00000321897 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
VARS2-201ENST00000321897 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
VARS2-201ENST00000321897 PNISRQ8TF01 805 aaKnown RBP19.56■□□□□ 0.72
VARS2-201ENST00000321897 COG6Q9Y2V7 657 aa19.56■□□□□ 0.72
VARS2-201ENST00000321897 WASHC2CQ9Y4E1 1318 aa19.55■□□□□ 0.72
VARS2-201ENST00000321897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
VARS2-201ENST00000321897 EPRSP07814 1512 aaKnown RBP19.55■□□□□ 0.72
VARS2-201ENST00000321897 NCLP19338 710 aaKnown RBP19.55■□□□□ 0.72
VARS2-201ENST00000321897 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
VARS2-201ENST00000321897 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
VARS2-201ENST00000321897 USP35Q9P2H5 1018 aa19.54■□□□□ 0.72
VARS2-201ENST00000321897 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
VARS2-201ENST00000321897 NFKBIBQ15653 356 aa19.53■□□□□ 0.72
VARS2-201ENST00000321897 ZNF608Q9ULD9 1512 aaPredicted RBP19.53■□□□□ 0.72
VARS2-201ENST00000321897 DAPK1P53355 1430 aa19.52■□□□□ 0.72
VARS2-201ENST00000321897 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
VARS2-201ENST00000321897 BIVM-ERCC5R4GMW8 1640 aa19.51■□□□□ 0.71
VARS2-201ENST00000321897 EFCAB5A4FU69 1503 aa19.5■□□□□ 0.71
VARS2-201ENST00000321897 LMOD2Q6P5Q4 547 aa19.5■□□□□ 0.71
VARS2-201ENST00000321897 RSPH4AQ5TD94 716 aa19.49■□□□□ 0.71
VARS2-201ENST00000321897 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
VARS2-201ENST00000321897 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
VARS2-201ENST00000321897 MINK1Q8N4C8 1332 aaPredicted RBP19.47■□□□□ 0.71
VARS2-201ENST00000321897 ABCC5O15440 1437 aa19.46■□□□□ 0.71
VARS2-201ENST00000321897 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
VARS2-201ENST00000321897 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
VARS2-201ENST00000321897 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
VARS2-201ENST00000321897 KIAA1107Q9UPP5 1409 aa19.44■□□□□ 0.7
VARS2-201ENST00000321897 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
VARS2-201ENST00000321897 CYB5RLQ6IPT4 315 aa19.44■□□□□ 0.7
VARS2-201ENST00000321897 PANK1Q8TE04 598 aa19.44■□□□□ 0.7
VARS2-201ENST00000321897 CENPJQ9HC77 1338 aaPredicted RBP19.43■□□□□ 0.7
VARS2-201ENST00000321897 TROQ12816 1431 aaPredicted RBP19.43■□□□□ 0.7
VARS2-201ENST00000321897 FRAT2O75474 233 aaPredicted RBP19.43■□□□□ 0.7
VARS2-201ENST00000321897 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
VARS2-201ENST00000321897 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
VARS2-201ENST00000321897 ARHGEF11O15085 1522 aa19.43■□□□□ 0.7
VARS2-201ENST00000321897 SLC12A5Q9H2X9 1139 aa19.41■□□□□ 0.7
VARS2-201ENST00000321897 FOXD4L1Q9NU39 408 aa19.41■□□□□ 0.7
VARS2-201ENST00000321897 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
VARS2-201ENST00000321897 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
VARS2-201ENST00000321897 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
VARS2-201ENST00000321897 BCAR3O75815 825 aa19.4■□□□□ 0.7
VARS2-201ENST00000321897 HSP90AA2PQ14568 343 aaPredicted RBP19.4■□□□□ 0.7
VARS2-201ENST00000321897 C20orf194Q5TEA3 1177 aa19.4■□□□□ 0.7
VARS2-201ENST00000321897 GGNBP2Q9H3C7 697 aa19.4■□□□□ 0.7
VARS2-201ENST00000321897 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
VARS2-201ENST00000321897 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
VARS2-201ENST00000321897 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
VARS2-201ENST00000321897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.69
VARS2-201ENST00000321897 PPP2R1AP30153 589 aa19.38■□□□□ 0.69
VARS2-201ENST00000321897 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
VARS2-201ENST00000321897 GOLGA6L3A6NEY3 463 aa19.36■□□□□ 0.69
VARS2-201ENST00000321897 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
VARS2-201ENST00000321897 A0A0G2JS52 829 aa19.35■□□□□ 0.69
VARS2-201ENST00000321897 DNTTIP2Q5QJE6 756 aaKnown RBP19.35■□□□□ 0.69
VARS2-201ENST00000321897 ARHGAP5Q13017 1502 aa19.33■□□□□ 0.69
VARS2-201ENST00000321897 NCOA1Q15788 1441 aa19.33■□□□□ 0.69
VARS2-201ENST00000321897 MTHFSP49914 203 aa19.33■□□□□ 0.68
VARS2-201ENST00000321897 AMER1Q5JTC6 1135 aaPredicted RBP19.33■□□□□ 0.68
VARS2-201ENST00000321897 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
VARS2-201ENST00000321897 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
VARS2-201ENST00000321897 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
VARS2-201ENST00000321897 HDGFL2Q7Z4V5 671 aaPredicted RBP19.32■□□□□ 0.68
VARS2-201ENST00000321897 PTMAP06454 111 aaKnown RBP19.31■□□□□ 0.68
VARS2-201ENST00000321897 BACH2Q9BYV9 841 aa19.3■□□□□ 0.68
VARS2-201ENST00000321897 HMOX1P09601 288 aa19.3■□□□□ 0.68
VARS2-201ENST00000321897 BRD4O60885 1362 aaPredicted RBP19.3■□□□□ 0.68
VARS2-201ENST00000321897 MAP3K1Q13233 1512 aa19.3■□□□□ 0.68
VARS2-201ENST00000321897 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
VARS2-201ENST00000321897 GOLGA6L22H0YM25 854 aa19.3■□□□□ 0.68
VARS2-201ENST00000321897 TAOK2Q9UL54 1235 aa19.3■□□□□ 0.68
VARS2-201ENST00000321897 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
VARS2-201ENST00000321897 KIAA0586Q9BVV6 1533 aa19.29■□□□□ 0.68
VARS2-201ENST00000321897 HECW1Q76N89 1606 aa19.29■□□□□ 0.68
VARS2-201ENST00000321897 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
VARS2-201ENST00000321897 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms