RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.44■■■□□ 2.625e-10■□□□□ 8.4
YBX1-201ENST00000321358 MLECQ14165 292 aa31.43■■■□□ 2.62
YBX1-201ENST00000321358 TRIM52Q96A61 297 aa31.43■■■□□ 2.62
YBX1-201ENST00000321358 EIF2AK4Q9P2K8 1649 aaKnown RBP31.4■■■□□ 2.62
YBX1-201ENST00000321358 KANK1Q14678 1352 aa31.39■■■□□ 2.62
YBX1-201ENST00000321358 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
YBX1-201ENST00000321358 PPP6R1Q9UPN7 881 aa31.38■■■□□ 2.61
YBX1-201ENST00000321358 NUP155O75694 1391 aa31.35■■■□□ 2.61
YBX1-201ENST00000321358 WASHC2CQ9Y4E1 1318 aa31.33■■■□□ 2.61
YBX1-201ENST00000321358 BCORL1Q5H9F3 1711 aa31.3■■■□□ 2.6
YBX1-201ENST00000321358 RNF17Q9BXT8 1623 aaKnown RBP31.26■■■□□ 2.6
YBX1-201ENST00000321358 SIGLEC1Q9BZZ2 1709 aa31.26■■■□□ 2.6
YBX1-201ENST00000321358 SLC4A1APQ9BWU0 796 aaKnown RBP31.24■■■□□ 2.59
YBX1-201ENST00000321358 UNC13BO14795 1591 aa31.23■■■□□ 2.59
YBX1-201ENST00000321358 PRDM15P57071 1507 aaPredicted RBP31.22■■■□□ 2.59
YBX1-201ENST00000321358 DEPDC5O75140 1603 aa31.22■■■□□ 2.59
YBX1-201ENST00000321358 MPHOSPH9Q99550 1183 aa31.19■■■□□ 2.58
YBX1-201ENST00000321358 CNTLNQ9NXG0 1405 aa31.18■■■□□ 2.58
YBX1-201ENST00000321358 FAM135AQ9P2D6 1515 aa31.18■■■□□ 2.58
YBX1-201ENST00000321358 MROH1Q8NDA8 1641 aa31.17■■■□□ 2.58
YBX1-201ENST00000321358 KDM5DQ9BY66 1539 aa31.16■■■□□ 2.58
YBX1-201ENST00000321358 VWDEQ8N2E2 1590 aa31.13■■■□□ 2.57
YBX1-201ENST00000321358 ABCC3O15438 1527 aa31.13■■■□□ 2.57
YBX1-201ENST00000321358 PKD2Q13563 968 aa31.12■■■□□ 2.57
YBX1-201ENST00000321358 IQGAP3Q86VI3 1631 aa31.11■■■□□ 2.57
YBX1-201ENST00000321358 LMTK2Q8IWU2 1503 aa31.11■■■□□ 2.57
YBX1-201ENST00000321358 PZPP20742 1482 aa31.11■■■□□ 2.57
YBX1-201ENST00000321358 ADAMTSL3P82987 1691 aa31.08■■■□□ 2.57
YBX1-201ENST00000321358 ZMYM3Q14202 1370 aa31.08■■■□□ 2.57
YBX1-201ENST00000321358 ZC3H13Q5T200 1668 aaKnown RBP31.07■■■□□ 2.56
YBX1-201ENST00000321358 ARHGAP31Q2M1Z3 1444 aa31.03■■■□□ 2.56
YBX1-201ENST00000321358 CLTCQ00610 1675 aaKnown RBP31.02■■■□□ 2.56
YBX1-201ENST00000321358 PLPPR3Q6T4P5 718 aa31.01■■■□□ 2.55
YBX1-201ENST00000321358 MADDQ8WXG6 1647 aa31.01■■■□□ 2.55
YBX1-201ENST00000321358 FER1L4A9Z1Z3 1794 aa31.01■■■□□ 2.55
YBX1-201ENST00000321358 TET3O43151 1660 aa31.01■■■□□ 2.55
YBX1-201ENST00000321358 CEP152O94986 1710 aa31■■■□□ 2.55
YBX1-201ENST00000321358 EFCAB6Q5THR3 1501 aa31■■■□□ 2.55
YBX1-201ENST00000321358 DHX57Q6P158 1386 aaKnown RBP30.99■■■□□ 2.55
YBX1-201ENST00000321358 FOXD1Q16676 465 aa30.99■■■□□ 2.55
YBX1-201ENST00000321358 RPRD2Q5VT52 1461 aaKnown RBP30.99■■■□□ 2.55
YBX1-201ENST00000321358 NPATQ14207 1427 aa30.98■■■□□ 2.55
YBX1-201ENST00000321358 CEBPAP49715 358 aaPredicted RBP30.98■■■□□ 2.55
YBX1-201ENST00000321358 PTPRMP28827 1452 aa30.98■■■□□ 2.55
YBX1-201ENST00000321358 CAMSAP1Q5T5Y3 1602 aa30.97■■■□□ 2.55
YBX1-201ENST00000321358 CCER1Q8TC90 406 aaPredicted RBP30.95■■■□□ 2.55
YBX1-201ENST00000321358 FBXO31Q5XUX0 539 aaPredicted RBP30.94■■■□□ 2.54
YBX1-201ENST00000321358 MROH2AA6NES4 1674 aa30.94■■■□□ 2.54
YBX1-201ENST00000321358 RIMS1Q86UR5 1692 aaKnown RBP30.93■■■□□ 2.54
YBX1-201ENST00000321358 E9PCH4 1651 aa30.87■■■□□ 2.53
YBX1-201ENST00000321358 ERVK-7P63135 1459 aa30.85■■■□□ 2.53
YBX1-201ENST00000321358 PTPRTO14522 1441 aa30.84■■■□□ 2.53
YBX1-201ENST00000321358 SLC52A1Q9NWF4 448 aa30.84■■■□□ 2.53
YBX1-201ENST00000321358 TNRQ92752 1358 aa30.84■■■□□ 2.53
YBX1-201ENST00000321358 ANKRD30BQ9BXX2 1392 aa30.84■■■□□ 2.53
YBX1-201ENST00000321358 NOS1P29475 1434 aa30.84■■■□□ 2.53
YBX1-201ENST00000321358 C3P01024 1663 aa30.81■■■□□ 2.52
YBX1-201ENST00000321358 CLSPNQ9HAW4 1339 aa30.81■■■□□ 2.52
YBX1-201ENST00000321358 CCDC144AA2RUR9 1427 aa30.8■■■□□ 2.52
YBX1-201ENST00000321358 SPATA31D1Q6ZQQ2 1576 aa30.79■■■□□ 2.52
YBX1-201ENST00000321358 PLA2R1Q13018 1463 aa30.77■■■□□ 2.52
YBX1-201ENST00000321358 PREX1Q8TCU6 1659 aa30.76■■■□□ 2.51
YBX1-201ENST00000321358 IDI1Q13907 227 aa30.75■■■□□ 2.51
YBX1-201ENST00000321358 TRPM2O94759 1503 aa30.75■■■□□ 2.51
YBX1-201ENST00000321358 STAG3Q9UJ98 1225 aa30.74■■■□□ 2.51
YBX1-201ENST00000321358 CFAP65Q6ZU64 1925 aaKnown RBP30.74■■■□□ 2.51
YBX1-201ENST00000321358 SPHKAPQ2M3C7 1700 aa30.72■■■□□ 2.51
YBX1-201ENST00000321358 CHGAP10645 457 aaKnown RBP30.72■■■□□ 2.51
YBX1-201ENST00000321358 NEUROD1Q13562 356 aa30.71■■■□□ 2.51
YBX1-201ENST00000321358 NLRP1Q9C000 1473 aa30.69■■■□□ 2.5
YBX1-201ENST00000321358 SYNMO15061 1565 aa30.69■■■□□ 2.5
YBX1-201ENST00000321358 SIN3AQ96ST3 1273 aa30.68■■■□□ 2.5
YBX1-201ENST00000321358 UGGT1Q9NYU2 1555 aa30.64■■■□□ 2.5
YBX1-201ENST00000321358 UHRF1BP1Q6BDS2 1440 aa30.63■■■□□ 2.49
YBX1-201ENST00000321358 LMTK3Q96Q04 1460 aa30.62■■■□□ 2.49
YBX1-201ENST00000321358 SETD1BQ9UPS6 1966 aaKnown RBP30.62■■■□□ 2.49
YBX1-201ENST00000321358 ZNF326Q5BKZ1 582 aaKnown RBP30.61■■■□□ 2.49
YBX1-201ENST00000321358 CLTCL1P53675 1640 aa30.6■■■□□ 2.49
YBX1-201ENST00000321358 THEMISQ8N1K5 641 aaPredicted RBP30.6■■■□□ 2.49
YBX1-201ENST00000321358 RGL3Q3MIN7 710 aa30.59■■■□□ 2.49
YBX1-201ENST00000321358 A2ML1A8K2U0 1454 aa30.58■■■□□ 2.49
YBX1-201ENST00000321358 PIK3C2BO00750 1634 aa30.58■■■□□ 2.49
YBX1-201ENST00000321358 MYO3AQ8NEV4 1616 aa30.54■■■□□ 2.48
YBX1-201ENST00000321358 HDGFP51858 240 aaKnown RBP30.53■■■□□ 2.48
YBX1-201ENST00000321358 TONSLQ96HA7 1378 aa30.53■■■□□ 2.48
YBX1-201ENST00000321358 ADGRB3O60242 1522 aa30.51■■■□□ 2.47
YBX1-201ENST00000321358 CEP170BQ9Y4F5 1589 aaPredicted RBP30.51■■■□□ 2.47
YBX1-201ENST00000321358 RPGRIP1LQ68CZ1 1315 aa30.51■■■□□ 2.47
YBX1-201ENST00000321358 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
YBX1-201ENST00000321358 TIMELESSQ9UNS1 1208 aa30.5■■■□□ 2.47
YBX1-201ENST00000321358 KIF1BO60333 1816 aa30.47■■■□□ 2.47
YBX1-201ENST00000321358 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
YBX1-201ENST00000321358 HSPA2P54652 639 aa30.46■■■□□ 2.47
YBX1-201ENST00000321358 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.46■■■□□ 2.47
YBX1-201ENST00000321358 TMEM131LA2VDJ0 1609 aa30.46■■■□□ 2.47
YBX1-201ENST00000321358 NEURL4Q96JN8 1562 aa30.45■■■□□ 2.47
YBX1-201ENST00000321358 DCAF11Q8TEB1 546 aa30.45■■■□□ 2.47
YBX1-201ENST00000321358 L3MBTL2Q969R5 705 aa30.44■■■□□ 2.46
YBX1-201ENST00000321358 STAC3Q96MF2 364 aa30.44■■■□□ 2.46
YBX1-201ENST00000321358 TMEM2Q9UHN6 1383 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms