RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 LAS1LQ9Y4W2 734 aaKnown RBP33.7■■■□□ 2.99
SENP3-201ENST00000321337 E9PCH4 1651 aa33.7■■■□□ 2.98
SENP3-201ENST00000321337 TCERG1O14776 1098 aaKnown RBP33.68■■■□□ 2.98
SENP3-201ENST00000321337 ADCY10Q96PN6 1610 aa33.68■■■□□ 2.98
SENP3-201ENST00000321337 NLRP13Q86W25 1043 aa33.67■■■□□ 2.98
SENP3-201ENST00000321337 IFT140Q96RY7 1462 aa33.67■■■□□ 2.98
SENP3-201ENST00000321337 CDC42BPAQ5VT25 1732 aa33.66■■■□□ 2.98
SENP3-201ENST00000321337 NBPF1Q3BBV0 1214 aa33.66■■■□□ 2.98
SENP3-201ENST00000321337 PARD3Q8TEW0 1356 aa33.65■■■□□ 2.98
SENP3-201ENST00000321337 HNRNPMP52272 730 aaKnown RBP eCLIP33.65■■■□□ 2.98
SENP3-201ENST00000321337 BACH2Q9BYV9 841 aa33.65■■■□□ 2.98
SENP3-201ENST00000321337 KTN1Q86UP2 1357 aaKnown RBP33.65■■■□□ 2.98
SENP3-201ENST00000321337 CEP170Q5SW79 1584 aa33.64■■■□□ 2.98
SENP3-201ENST00000321337 PER1O15534 1290 aaPredicted RBP33.63■■■□□ 2.97
SENP3-201ENST00000321337 CC2D1BQ5T0F9 858 aaKnown RBP33.62■■■□□ 2.97
SENP3-201ENST00000321337 RGL3Q3MIN7 710 aa33.61■■■□□ 2.97
SENP3-201ENST00000321337 FBLN2P98095 1184 aa33.6■■■□□ 2.97
SENP3-201ENST00000321337 TSPY4P0CV99 314 aa33.59■■■□□ 2.97
SENP3-201ENST00000321337 TSPY10P0CW01 314 aa33.59■■■□□ 2.97
SENP3-201ENST00000321337 PLEKHD1A6NEE1 506 aa33.57■■■□□ 2.96
SENP3-201ENST00000321337 KDM5DQ9BY66 1539 aa33.56■■■□□ 2.96
SENP3-201ENST00000321337 CHMP7Q8WUX9 453 aaPredicted RBP33.56■■■□□ 2.96
SENP3-201ENST00000321337 ABCC10Q5T3U5 1492 aa33.56■■■□□ 2.96
SENP3-201ENST00000321337 EIF4G3O43432 1585 aaKnown RBP33.56■■■□□ 2.96
SENP3-201ENST00000321337 PDE3BQ13370 1112 aa33.55■■■□□ 2.96
SENP3-201ENST00000321337 CRBNQ96SW2 442 aa33.55■■■□□ 2.96
SENP3-201ENST00000321337 PTPRGP23470 1445 aa33.55■■■□□ 2.96
SENP3-201ENST00000321337 SHANK2Q9UPX8 1470 aa33.54■■■□□ 2.96
SENP3-201ENST00000321337 NEFMP07197 916 aa33.52■■■□□ 2.96
SENP3-201ENST00000321337 PRAG1Q86YV5 1406 aa33.52■■■□□ 2.96
SENP3-201ENST00000321337 JPH4Q96JJ6 628 aa33.51■■■□□ 2.96
SENP3-201ENST00000321337 IL27Q8NEV9 243 aa33.51■■■□□ 2.95
SENP3-201ENST00000321337 DISP3Q9P2K9 1392 aa33.51■■■□□ 2.95
SENP3-201ENST00000321337 MS4A1P11836 297 aa33.49■■■□□ 2.95
SENP3-201ENST00000321337 C20orf194Q5TEA3 1177 aa33.49■■■□□ 2.95
SENP3-201ENST00000321337 MAGI1Q96QZ7 1491 aaPredicted RBP33.48■■■□□ 2.95
SENP3-201ENST00000321337 ATP10BO94823 1461 aa33.48■■■□□ 2.95
SENP3-201ENST00000321337 TRPM1Q7Z4N2 1603 aa33.47■■■□□ 2.95
SENP3-201ENST00000321337 PANK3Q9H999 370 aa33.47■■■□□ 2.95
SENP3-201ENST00000321337 TESK2Q96S53 571 aa33.45■■■□□ 2.95
SENP3-201ENST00000321337 FAM135AQ9P2D6 1515 aa33.45■■■□□ 2.95
SENP3-201ENST00000321337 CARMIL2Q6F5E8 1435 aa33.42■■■□□ 2.94
SENP3-201ENST00000321337 CCDC144AA2RUR9 1427 aa33.41■■■□□ 2.94
SENP3-201ENST00000321337 BLMP54132 1417 aaPredicted RBP33.41■■■□□ 2.94
SENP3-201ENST00000321337 ABCA8O94911 1581 aa33.4■■■□□ 2.94
SENP3-201ENST00000321337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.4■■■□□ 2.947e-7■■□□□ 12.5
SENP3-201ENST00000321337 PLA2R1Q13018 1463 aa33.39■■■□□ 2.94
SENP3-201ENST00000321337 COL17A1Q9UMD9 1497 aaPredicted RBP33.39■■■□□ 2.94
SENP3-201ENST00000321337 RTN4Q9NQC3 1192 aaKnown RBP33.38■■■□□ 2.93
SENP3-201ENST00000321337 A2MP01023 1474 aa33.37■■■□□ 2.93
SENP3-201ENST00000321337 SLC4A3P48751 1232 aa33.35■■■□□ 2.93
SENP3-201ENST00000321337 ADAMTS8Q9UP79 889 aa33.35■■■□□ 2.93
SENP3-201ENST00000321337 SYNJ2O15056 1496 aa33.34■■■□□ 2.93
SENP3-201ENST00000321337 GPRASP1Q5JY77 1395 aa33.33■■■□□ 2.93
SENP3-201ENST00000321337 ERBINQ96RT1 1412 aa33.31■■■□□ 2.92
SENP3-201ENST00000321337 ANO8Q9HCE9 1232 aaPredicted RBP33.31■■■□□ 2.92
SENP3-201ENST00000321337 ARHGEF5Q12774 1597 aa33.29■■■□□ 2.92
SENP3-201ENST00000321337 SAMD9LQ8IVG5 1584 aa33.28■■■□□ 2.92
SENP3-201ENST00000321337 USP35Q9P2H5 1018 aa33.28■■■□□ 2.92
SENP3-201ENST00000321337 PRDM15P57071 1507 aaPredicted RBP33.27■■■□□ 2.92
SENP3-201ENST00000321337 CCDC141Q6ZP82 1450 aa33.27■■■□□ 2.92
SENP3-201ENST00000321337 ZMYM4Q5VZL5 1548 aa33.27■■■□□ 2.92
SENP3-201ENST00000321337 KDM2BQ8NHM5 1336 aa33.26■■■□□ 2.92
SENP3-201ENST00000321337 WASHC2CQ9Y4E1 1318 aa33.26■■■□□ 2.92
SENP3-201ENST00000321337 NUP160Q12769 1436 aa33.26■■■□□ 2.91
SENP3-201ENST00000321337 PPM1GO15355 546 aaPredicted RBP33.26■■■□□ 2.91
SENP3-201ENST00000321337 PLEKHH1Q9ULM0 1364 aa33.26■■■□□ 2.91
SENP3-201ENST00000321337 TMF1P82094 1093 aa33.22■■■□□ 2.91
SENP3-201ENST00000321337 DUSP27Q5VZP5 1158 aa33.2■■■□□ 2.91
SENP3-201ENST00000321337 CDC42BPBQ9Y5S2 1711 aa33.19■■■□□ 2.9
SENP3-201ENST00000321337 INSRP06213 1382 aa33.19■■■□□ 2.9
SENP3-201ENST00000321337 DDRGK1Q96HY6 314 aa33.17■■■□□ 2.9
SENP3-201ENST00000321337 MAGI2Q86UL8 1455 aa33.17■■■□□ 2.9
SENP3-201ENST00000321337 PPP2R1AP30153 589 aa33.16■■■□□ 2.9
SENP3-201ENST00000321337 MYO5CQ9NQX4 1742 aa33.15■■■□□ 2.9
SENP3-201ENST00000321337 NFKBIBQ15653 356 aa33.15■■■□□ 2.9
SENP3-201ENST00000321337 SYCP2Q9BX26 1530 aa33.15■■■□□ 2.9
SENP3-201ENST00000321337 PLEKHH2Q8IVE3 1493 aa33.14■■■□□ 2.9
SENP3-201ENST00000321337 C8orf34Q49A92 452 aa33.13■■■□□ 2.89
SENP3-201ENST00000321337 LAMC1P11047 1609 aa33.12■■■□□ 2.89
SENP3-201ENST00000321337 CENPQQ7L2Z9 268 aaPredicted RBP33.1■■■□□ 2.89
SENP3-201ENST00000321337 WDR7Q9Y4E6 1490 aa33.1■■■□□ 2.89
SENP3-201ENST00000321337 WDR43Q15061 677 aaKnown RBP eCLIP33.09■■■□□ 2.89
SENP3-201ENST00000321337 UNC13BO14795 1591 aa33.09■■■□□ 2.89
SENP3-201ENST00000321337 BRPF3Q9ULD4 1205 aa33.09■■■□□ 2.89
SENP3-201ENST00000321337 ZNF521Q96K83 1311 aa33.09■■■□□ 2.89
SENP3-201ENST00000321337 PREX2Q70Z35 1606 aa33.08■■■□□ 2.89
SENP3-201ENST00000321337 RGS3P49796 1198 aa33.08■■■□□ 2.89
SENP3-201ENST00000321337 CCDC146Q8IYE0 955 aa33.07■■■□□ 2.88
SENP3-201ENST00000321337 KNSTRNQ9Y448 316 aa33.07■■■□□ 2.88
SENP3-201ENST00000321337 AMER1Q5JTC6 1135 aaPredicted RBP33.07■■■□□ 2.88
SENP3-201ENST00000321337 SPINK5Q9NQ38 1064 aaPredicted RBP33.06■■■□□ 2.88
SENP3-201ENST00000321337 GOLGA2Q08379 1002 aa33.05■■■□□ 2.88
SENP3-201ENST00000321337 FAM161AQ3B820 660 aa33.05■■■□□ 2.88
SENP3-201ENST00000321337 RSPH4AQ5TD94 716 aa33.05■■■□□ 2.88
SENP3-201ENST00000321337 GSE1Q14687 1217 aa33.03■■■□□ 2.88
SENP3-201ENST00000321337 EIF2AK4Q9P2K8 1649 aaKnown RBP33.01■■■□□ 2.88
SENP3-201ENST00000321337 ERCC6Q03468 1493 aa33.01■■■□□ 2.88
SENP3-201ENST00000321337 ARHGAP5Q13017 1502 aa33■■■□□ 2.87
SENP3-201ENST00000321337 FRAT1Q92837 279 aaPredicted RBP33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms