RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 RRBP1Q9P2E9 1410 aaKnown RBP28.56■■■□□ 2.16
CIRBP-201ENST00000320936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.54■■■□□ 2.165e-6■■■□□ 18.7
CIRBP-201ENST00000320936 ERBINQ96RT1 1412 aa28.54■■■□□ 2.16
CIRBP-201ENST00000320936 CEBPAP49715 358 aaPredicted RBP28.54■■■□□ 2.16
CIRBP-201ENST00000320936 NCOA1Q15788 1441 aa28.53■■■□□ 2.16
CIRBP-201ENST00000320936 KDM5DQ9BY66 1539 aa28.52■■■□□ 2.16
CIRBP-201ENST00000320936 PTPRKQ15262 1439 aa28.51■■■□□ 2.15
CIRBP-201ENST00000320936 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
CIRBP-201ENST00000320936 FAM135AQ9P2D6 1515 aa28.49■■■□□ 2.15
CIRBP-201ENST00000320936 PREX1Q8TCU6 1659 aa28.47■■■□□ 2.15
CIRBP-201ENST00000320936 ZC3H13Q5T200 1668 aaKnown RBP28.46■■■□□ 2.15
CIRBP-201ENST00000320936 WASHC2CQ9Y4E1 1318 aa28.46■■■□□ 2.15
CIRBP-201ENST00000320936 MROH1Q8NDA8 1641 aa28.46■■■□□ 2.15
CIRBP-201ENST00000320936 ZMYM3Q14202 1370 aa28.45■■■□□ 2.15
CIRBP-201ENST00000320936 CEP152O94986 1710 aa28.45■■■□□ 2.14
CIRBP-201ENST00000320936 ROCK1Q13464 1354 aa28.43■■■□□ 2.14
CIRBP-201ENST00000320936 DEPDC5O75140 1603 aa28.43■■■□□ 2.14
CIRBP-201ENST00000320936 ABCC3O15438 1527 aa28.42■■■□□ 2.14
CIRBP-201ENST00000320936 PRDM15P57071 1507 aaPredicted RBP28.42■■■□□ 2.14
CIRBP-201ENST00000320936 ANKRD50Q9ULJ7 1429 aa28.41■■■□□ 2.14
CIRBP-201ENST00000320936 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.41■■■□□ 2.14
CIRBP-201ENST00000320936 LMTK3Q96Q04 1460 aa28.4■■■□□ 2.14
CIRBP-201ENST00000320936 SETD1BQ9UPS6 1966 aaKnown RBP28.38■■■□□ 2.13
CIRBP-201ENST00000320936 KANK1Q14678 1352 aa28.37■■■□□ 2.13
CIRBP-201ENST00000320936 CAMSAP1Q5T5Y3 1602 aa28.37■■■□□ 2.13
CIRBP-201ENST00000320936 NPATQ14207 1427 aa28.36■■■□□ 2.13
CIRBP-201ENST00000320936 UHRF1BP1Q6BDS2 1440 aa28.36■■■□□ 2.13
CIRBP-201ENST00000320936 PZPP20742 1482 aa28.33■■■□□ 2.13
CIRBP-201ENST00000320936 MYO3AQ8NEV4 1616 aa28.31■■■□□ 2.12
CIRBP-201ENST00000320936 GCC2Q8IWJ2 1684 aa28.3■■■□□ 2.12
CIRBP-201ENST00000320936 UNC13BO14795 1591 aa28.28■■■□□ 2.12
CIRBP-201ENST00000320936 HSPA2P54652 639 aa28.28■■■□□ 2.12
CIRBP-201ENST00000320936 CFAP65Q6ZU64 1925 aaKnown RBP28.28■■■□□ 2.12
CIRBP-201ENST00000320936 VWDEQ8N2E2 1590 aa28.25■■■□□ 2.11
CIRBP-201ENST00000320936 FBXO31Q5XUX0 539 aaPredicted RBP28.25■■■□□ 2.11
CIRBP-201ENST00000320936 TNRQ92752 1358 aa28.24■■■□□ 2.11
CIRBP-201ENST00000320936 ZNF142P52746 1687 aaPredicted RBP28.24■■■□□ 2.11
CIRBP-201ENST00000320936 CEP170BQ9Y4F5 1589 aaPredicted RBP28.21■■■□□ 2.11
CIRBP-201ENST00000320936 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
CIRBP-201ENST00000320936 EFCAB6Q5THR3 1501 aa28.2■■■□□ 2.1
CIRBP-201ENST00000320936 ERVK-7P63135 1459 aa28.2■■■□□ 2.1
CIRBP-201ENST00000320936 NAIPQ13075 1403 aa28.2■■■□□ 2.1
CIRBP-201ENST00000320936 TET3O43151 1660 aa28.19■■■□□ 2.1
CIRBP-201ENST00000320936 SPATA31D1Q6ZQQ2 1576 aa28.18■■■□□ 2.1
CIRBP-201ENST00000320936 HFM1A2PYH4 1435 aa28.17■■■□□ 2.1
CIRBP-201ENST00000320936 IQGAP3Q86VI3 1631 aa28.17■■■□□ 2.1
CIRBP-201ENST00000320936 ARHGAP31Q2M1Z3 1444 aa28.16■■■□□ 2.1
CIRBP-201ENST00000320936 NUP155O75694 1391 aa28.13■■■□□ 2.09
CIRBP-201ENST00000320936 A2ML1A8K2U0 1454 aa28.13■■■□□ 2.09
CIRBP-201ENST00000320936 NLRP1Q9C000 1473 aa28.11■■■□□ 2.09
CIRBP-201ENST00000320936 STRCQ7RTU9 1775 aa28.07■■■□□ 2.08
CIRBP-201ENST00000320936 E9PCH4 1651 aa28.07■■■□□ 2.08
CIRBP-201ENST00000320936 RPRD2Q5VT52 1461 aaKnown RBP28.06■■■□□ 2.08
CIRBP-201ENST00000320936 UGGT1Q9NYU2 1555 aa28.05■■■□□ 2.08
CIRBP-201ENST00000320936 TRIM52Q96A61 297 aa28.04■■■□□ 2.08
CIRBP-201ENST00000320936 SYNMO15061 1565 aa28.03■■■□□ 2.08
CIRBP-201ENST00000320936 PIK3C2BO00750 1634 aa28■■■□□ 2.07
CIRBP-201ENST00000320936 UBR1Q8IWV7 1749 aa27.99■■■□□ 2.07
CIRBP-201ENST00000320936 NOS1P29475 1434 aa27.98■■■□□ 2.07
CIRBP-201ENST00000320936 PLA2R1Q13018 1463 aa27.98■■■□□ 2.07
CIRBP-201ENST00000320936 POLR1AO95602 1720 aaPredicted RBP27.98■■■□□ 2.07
CIRBP-201ENST00000320936 THEMISQ8N1K5 641 aaPredicted RBP27.95■■■□□ 2.07
CIRBP-201ENST00000320936 SETD5Q9C0A6 1442 aa27.95■■■□□ 2.06
CIRBP-201ENST00000320936 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
CIRBP-201ENST00000320936 SPHKAPQ2M3C7 1700 aa27.94■■■□□ 2.06
CIRBP-201ENST00000320936 NCKAP5LQ9HCH0 1330 aa27.94■■■□□ 2.06
CIRBP-201ENST00000320936 DMRT2Q9Y5R5 561 aa27.93■■■□□ 2.06
CIRBP-201ENST00000320936 KDM5AP29375 1690 aaKnown RBP27.9■■■□□ 2.06
CIRBP-201ENST00000320936 ADGRB3O60242 1522 aa27.89■■■□□ 2.06
CIRBP-201ENST00000320936 PKD2Q13563 968 aa27.89■■■□□ 2.05
CIRBP-201ENST00000320936 IDI1Q13907 227 aa27.89■■■□□ 2.05
CIRBP-201ENST00000320936 SLC4A1APQ9BWU0 796 aaKnown RBP27.88■■■□□ 2.05
CIRBP-201ENST00000320936 SLC52A1Q9NWF4 448 aa27.88■■■□□ 2.05
CIRBP-201ENST00000320936 PTPRTO14522 1441 aa27.86■■■□□ 2.05
CIRBP-201ENST00000320936 MYO5BQ9ULV0 1848 aa27.86■■■□□ 2.05
CIRBP-201ENST00000320936 RAB3GAP2Q9H2M9 1393 aa27.86■■■□□ 2.05
CIRBP-201ENST00000320936 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
CIRBP-201ENST00000320936 NEURL4Q96JN8 1562 aa27.84■■■□□ 2.05
CIRBP-201ENST00000320936 CHGAP10645 457 aaKnown RBP27.82■■■□□ 2.04
CIRBP-201ENST00000320936 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
CIRBP-201ENST00000320936 SLIT1O75093 1534 aa27.8■■■□□ 2.04
CIRBP-201ENST00000320936 TMEM131LA2VDJ0 1609 aa27.79■■■□□ 2.04
CIRBP-201ENST00000320936 IQGAP1P46940 1657 aa27.79■■■□□ 2.04
CIRBP-201ENST00000320936 TRPM2O94759 1503 aa27.79■■■□□ 2.04
CIRBP-201ENST00000320936 SCAF11Q99590 1463 aaKnown RBP27.78■■■□□ 2.04
CIRBP-201ENST00000320936 ARHGAP23Q9P227 1491 aa27.77■■■□□ 2.04
CIRBP-201ENST00000320936 EID1Q9Y6B2 187 aa27.77■■■□□ 2.04
CIRBP-201ENST00000320936 TMEM2Q9UHN6 1383 aa27.77■■■□□ 2.04
CIRBP-201ENST00000320936 CLTCL1P53675 1640 aa27.76■■■□□ 2.03
CIRBP-201ENST00000320936 NPHP4O75161 1426 aaPredicted RBP27.76■■■□□ 2.03
CIRBP-201ENST00000320936 TXNDC2Q86VQ3 553 aa27.74■■■□□ 2.03
CIRBP-201ENST00000320936 MPHOSPH9Q99550 1183 aa27.74■■■□□ 2.03
CIRBP-201ENST00000320936 KIF1BO60333 1816 aa27.73■■■□□ 2.03
CIRBP-201ENST00000320936 MED14O60244 1454 aa27.72■■■□□ 2.03
CIRBP-201ENST00000320936 FOXD1Q16676 465 aa27.72■■■□□ 2.03
CIRBP-201ENST00000320936 LTKP29376 864 aa27.69■■■□□ 2.02
CIRBP-201ENST00000320936 RIMS2Q9UQ26 1411 aa27.67■■■□□ 2.02
CIRBP-201ENST00000320936 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
CIRBP-201ENST00000320936 ZNF326Q5BKZ1 582 aaKnown RBP27.65■■■□□ 2.02
CIRBP-201ENST00000320936 ZNF335Q9H4Z2 1342 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms