RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
HNF4A-202ENST00000316673 RNF17Q9BXT8 1623 aaKnown RBP22.95■■□□□ 1.26
HNF4A-202ENST00000316673 FAM135AQ9P2D6 1515 aa22.95■■□□□ 1.26
HNF4A-202ENST00000316673 GGT6Q6P531 493 aa22.94■■□□□ 1.26
HNF4A-202ENST00000316673 MLECQ14165 292 aa22.93■■□□□ 1.26
HNF4A-202ENST00000316673 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
HNF4A-202ENST00000316673 SETD5Q9C0A6 1442 aa22.92■■□□□ 1.26
HNF4A-202ENST00000316673 DEPDC5O75140 1603 aa22.91■■□□□ 1.26
HNF4A-202ENST00000316673 KANK1Q14678 1352 aa22.91■■□□□ 1.26
HNF4A-202ENST00000316673 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
HNF4A-202ENST00000316673 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
HNF4A-202ENST00000316673 PRDM15P57071 1507 aaPredicted RBP22.9■■□□□ 1.26
HNF4A-202ENST00000316673 UNC13BO14795 1591 aa22.86■■□□□ 1.25
HNF4A-202ENST00000316673 KDM5DQ9BY66 1539 aa22.86■■□□□ 1.25
HNF4A-202ENST00000316673 WASHC2CQ9Y4E1 1318 aa22.86■■□□□ 1.25
HNF4A-202ENST00000316673 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
HNF4A-202ENST00000316673 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
HNF4A-202ENST00000316673 HRCP23327 699 aa22.85■■□□□ 1.25
HNF4A-202ENST00000316673 ZC3H13Q5T200 1668 aaKnown RBP22.85■■□□□ 1.25
HNF4A-202ENST00000316673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.251e-8■□□□□ 10
HNF4A-202ENST00000316673 MADDQ8WXG6 1647 aa22.84■■□□□ 1.25
HNF4A-202ENST00000316673 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
HNF4A-202ENST00000316673 NUP155O75694 1391 aa22.81■■□□□ 1.24
HNF4A-202ENST00000316673 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
HNF4A-202ENST00000316673 MROH2AA6NES4 1674 aa22.8■■□□□ 1.24
HNF4A-202ENST00000316673 ABCC3O15438 1527 aa22.79■■□□□ 1.24
HNF4A-202ENST00000316673 LMTK2Q8IWU2 1503 aa22.79■■□□□ 1.24
HNF4A-202ENST00000316673 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
HNF4A-202ENST00000316673 CLTCQ00610 1675 aaKnown RBP22.78■■□□□ 1.24
HNF4A-202ENST00000316673 RIMS1Q86UR5 1692 aaKnown RBP22.78■■□□□ 1.24
HNF4A-202ENST00000316673 TRIM52Q96A61 297 aa22.78■■□□□ 1.24
HNF4A-202ENST00000316673 IQGAP3Q86VI3 1631 aa22.77■■□□□ 1.24
HNF4A-202ENST00000316673 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
HNF4A-202ENST00000316673 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
HNF4A-202ENST00000316673 PTPRMP28827 1452 aa22.74■■□□□ 1.23
HNF4A-202ENST00000316673 CEP152O94986 1710 aa22.74■■□□□ 1.23
HNF4A-202ENST00000316673 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
HNF4A-202ENST00000316673 TET3O43151 1660 aa22.73■■□□□ 1.23
HNF4A-202ENST00000316673 CAMSAP1Q5T5Y3 1602 aa22.72■■□□□ 1.23
HNF4A-202ENST00000316673 EFCAB6Q5THR3 1501 aa22.7■■□□□ 1.22
HNF4A-202ENST00000316673 PZPP20742 1482 aa22.7■■□□□ 1.22
HNF4A-202ENST00000316673 RPRD2Q5VT52 1461 aaKnown RBP22.7■■□□□ 1.22
HNF4A-202ENST00000316673 C3P01024 1663 aa22.69■■□□□ 1.22
HNF4A-202ENST00000316673 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
HNF4A-202ENST00000316673 NPATQ14207 1427 aa22.67■■□□□ 1.22
HNF4A-202ENST00000316673 CEBPAP49715 358 aaPredicted RBP22.64■■□□□ 1.21
HNF4A-202ENST00000316673 MPHOSPH9Q99550 1183 aa22.64■■□□□ 1.21
HNF4A-202ENST00000316673 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
HNF4A-202ENST00000316673 SETD1BQ9UPS6 1966 aaKnown RBP22.62■■□□□ 1.21
HNF4A-202ENST00000316673 E9PCH4 1651 aa22.61■■□□□ 1.21
HNF4A-202ENST00000316673 PKD2Q13563 968 aa22.6■■□□□ 1.21
HNF4A-202ENST00000316673 ERVK-7P63135 1459 aa22.6■■□□□ 1.21
HNF4A-202ENST00000316673 SPATA31D1Q6ZQQ2 1576 aa22.6■■□□□ 1.21
HNF4A-202ENST00000316673 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
HNF4A-202ENST00000316673 PREX1Q8TCU6 1659 aa22.58■■□□□ 1.21
HNF4A-202ENST00000316673 FBXO31Q5XUX0 539 aaPredicted RBP22.58■■□□□ 1.2
HNF4A-202ENST00000316673 TNRQ92752 1358 aa22.57■■□□□ 1.2
HNF4A-202ENST00000316673 NOS1P29475 1434 aa22.56■■□□□ 1.2
HNF4A-202ENST00000316673 CFAP65Q6ZU64 1925 aaKnown RBP22.56■■□□□ 1.2
HNF4A-202ENST00000316673 FBXO41Q8TF61 875 aa22.54■■□□□ 1.2
HNF4A-202ENST00000316673 PTPRTO14522 1441 aa22.53■■□□□ 1.2
HNF4A-202ENST00000316673 NLRP1Q9C000 1473 aa22.53■■□□□ 1.2
HNF4A-202ENST00000316673 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
HNF4A-202ENST00000316673 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
HNF4A-202ENST00000316673 SPHKAPQ2M3C7 1700 aa22.51■■□□□ 1.19
HNF4A-202ENST00000316673 UHRF1BP1Q6BDS2 1440 aa22.51■■□□□ 1.19
HNF4A-202ENST00000316673 TRPM2O94759 1503 aa22.48■■□□□ 1.19
HNF4A-202ENST00000316673 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
HNF4A-202ENST00000316673 SYNMO15061 1565 aa22.48■■□□□ 1.19
HNF4A-202ENST00000316673 FOXD1Q16676 465 aa22.46■■□□□ 1.19
HNF4A-202ENST00000316673 A2ML1A8K2U0 1454 aa22.45■■□□□ 1.18
HNF4A-202ENST00000316673 PLA2R1Q13018 1463 aa22.44■■□□□ 1.18
HNF4A-202ENST00000316673 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
HNF4A-202ENST00000316673 PIK3C2BO00750 1634 aa22.44■■□□□ 1.18
HNF4A-202ENST00000316673 IDI1Q13907 227 aa22.43■■□□□ 1.18
HNF4A-202ENST00000316673 CCDC144AA2RUR9 1427 aa22.43■■□□□ 1.18
HNF4A-202ENST00000316673 CEP170BQ9Y4F5 1589 aaPredicted RBP22.43■■□□□ 1.18
HNF4A-202ENST00000316673 ANKRD30BQ9BXX2 1392 aa22.42■■□□□ 1.18
HNF4A-202ENST00000316673 KDM5AP29375 1690 aaKnown RBP22.42■■□□□ 1.18
HNF4A-202ENST00000316673 STAG3Q9UJ98 1225 aa22.41■■□□□ 1.18
HNF4A-202ENST00000316673 UGGT1Q9NYU2 1555 aa22.4■■□□□ 1.18
HNF4A-202ENST00000316673 THEMISQ8N1K5 641 aaPredicted RBP22.39■■□□□ 1.17
HNF4A-202ENST00000316673 LMTK3Q96Q04 1460 aa22.38■■□□□ 1.17
HNF4A-202ENST00000316673 CLTCL1P53675 1640 aa22.37■■□□□ 1.17
HNF4A-202ENST00000316673 ADGRB3O60242 1522 aa22.37■■□□□ 1.17
HNF4A-202ENST00000316673 KIF1BO60333 1816 aa22.34■■□□□ 1.17
HNF4A-202ENST00000316673 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
HNF4A-202ENST00000316673 TMEM131LA2VDJ0 1609 aa22.33■■□□□ 1.16
HNF4A-202ENST00000316673 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
HNF4A-202ENST00000316673 NEURL4Q96JN8 1562 aa22.32■■□□□ 1.16
HNF4A-202ENST00000316673 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
HNF4A-202ENST00000316673 TMEM2Q9UHN6 1383 aa22.27■■□□□ 1.16
HNF4A-202ENST00000316673 SLIT1O75093 1534 aa22.27■■□□□ 1.16
HNF4A-202ENST00000316673 HSPA2P54652 639 aa22.27■■□□□ 1.16
HNF4A-202ENST00000316673 TIMELESSQ9UNS1 1208 aa22.27■■□□□ 1.16
HNF4A-202ENST00000316673 RPGRIP1LQ68CZ1 1315 aa22.27■■□□□ 1.16
HNF4A-202ENST00000316673 ARHGAP23Q9P227 1491 aa22.26■■□□□ 1.15
HNF4A-202ENST00000316673 SPATA31E1Q6ZUB1 1445 aa22.26■■□□□ 1.15
HNF4A-202ENST00000316673 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
HNF4A-202ENST00000316673 EID1Q9Y6B2 187 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms