RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 C11orf95C9JLR9 678 aaPredicted RBP25.76■■□□□ 1.71
CCDC43-201ENST00000315286 MYT1LQ9UL68 1186 aa25.76■■□□□ 1.71
CCDC43-201ENST00000315286 ANP32CO43423 234 aa25.75■■□□□ 1.71
CCDC43-201ENST00000315286 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
CCDC43-201ENST00000315286 KDM2AQ9Y2K7 1162 aa25.75■■□□□ 1.71
CCDC43-201ENST00000315286 ATP10AO60312 1499 aa25.71■■□□□ 1.71
CCDC43-201ENST00000315286 DEPDC5O75140 1603 aa25.71■■□□□ 1.71
CCDC43-201ENST00000315286 CCDC7Q96M83 1385 aa25.7■■□□□ 1.71
CCDC43-201ENST00000315286 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
CCDC43-201ENST00000315286 RALGAPBQ86X10 1494 aa25.7■■□□□ 1.7
CCDC43-201ENST00000315286 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
CCDC43-201ENST00000315286 CFAP74Q9C0B2 1584 aa25.69■■□□□ 1.7
CCDC43-201ENST00000315286 ZNF518AQ6AHZ1 1483 aa25.69■■□□□ 1.7
CCDC43-201ENST00000315286 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
CCDC43-201ENST00000315286 USP47Q96K76 1375 aa25.67■■□□□ 1.7
CCDC43-201ENST00000315286 RGL3Q3MIN7 710 aa25.67■■□□□ 1.7
CCDC43-201ENST00000315286 KIF3BO15066 747 aa25.67■■□□□ 1.7
CCDC43-201ENST00000315286 E9PCH4 1651 aa25.66■■□□□ 1.7
CCDC43-201ENST00000315286 CCER2I3L3R5 266 aa25.65■■□□□ 1.7
CCDC43-201ENST00000315286 GTF3C3Q9Y5Q9 886 aa25.65■■□□□ 1.7
CCDC43-201ENST00000315286 KDM5CP41229 1560 aa25.65■■□□□ 1.7
CCDC43-201ENST00000315286 POLR1AO95602 1720 aaPredicted RBP25.64■■□□□ 1.7
CCDC43-201ENST00000315286 EIF2AK4Q9P2K8 1649 aaKnown RBP25.63■■□□□ 1.69
CCDC43-201ENST00000315286 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
CCDC43-201ENST00000315286 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
CCDC43-201ENST00000315286 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
CCDC43-201ENST00000315286 KIF7Q2M1P5 1343 aa25.63■■□□□ 1.69
CCDC43-201ENST00000315286 POGZQ7Z3K3 1410 aa25.63■■□□□ 1.69
CCDC43-201ENST00000315286 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
CCDC43-201ENST00000315286 A2MP01023 1474 aa25.62■■□□□ 1.69
CCDC43-201ENST00000315286 VWDEQ8N2E2 1590 aa25.61■■□□□ 1.69
CCDC43-201ENST00000315286 KANK1Q14678 1352 aa25.61■■□□□ 1.69
CCDC43-201ENST00000315286 CNTLNQ9NXG0 1405 aa25.61■■□□□ 1.69
CCDC43-201ENST00000315286 PRAG1Q86YV5 1406 aa25.6■■□□□ 1.69
CCDC43-201ENST00000315286 TET3O43151 1660 aa25.59■■□□□ 1.69
CCDC43-201ENST00000315286 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
CCDC43-201ENST00000315286 MROH1Q8NDA8 1641 aa25.59■■□□□ 1.69
CCDC43-201ENST00000315286 PRDM15P57071 1507 aaPredicted RBP25.57■■□□□ 1.68
CCDC43-201ENST00000315286 NEO1Q92859 1461 aa25.57■■□□□ 1.68
CCDC43-201ENST00000315286 MLH3Q9UHC1 1453 aa25.57■■□□□ 1.68
CCDC43-201ENST00000315286 PTPRTO14522 1441 aa25.55■■□□□ 1.68
CCDC43-201ENST00000315286 TRPM1Q7Z4N2 1603 aa25.55■■□□□ 1.68
CCDC43-201ENST00000315286 SPHKAPQ2M3C7 1700 aa25.55■■□□□ 1.68
CCDC43-201ENST00000315286 ROCK2O75116 1388 aaKnown RBP25.55■■□□□ 1.68
CCDC43-201ENST00000315286 TRPM2O94759 1503 aa25.55■■□□□ 1.68
CCDC43-201ENST00000315286 HECW2Q9P2P5 1572 aa25.53■■□□□ 1.68
CCDC43-201ENST00000315286 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
CCDC43-201ENST00000315286 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
CCDC43-201ENST00000315286 ST20-MTHFSA0A0A6YYL1 179 aa25.49■■□□□ 1.67
CCDC43-201ENST00000315286 NBPF1Q3BBV0 1214 aa25.49■■□□□ 1.67
CCDC43-201ENST00000315286 FRMPD1Q5SYB0 1578 aa25.49■■□□□ 1.67
CCDC43-201ENST00000315286 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
CCDC43-201ENST00000315286 CEP152O94986 1710 aa25.48■■□□□ 1.67
CCDC43-201ENST00000315286 GLI2P10070 1586 aa25.48■■□□□ 1.67
CCDC43-201ENST00000315286 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
CCDC43-201ENST00000315286 ARID4BQ4LE39 1312 aaPredicted RBP25.47■■□□□ 1.67
CCDC43-201ENST00000315286 ABCA6Q8N139 1617 aa25.47■■□□□ 1.67
CCDC43-201ENST00000315286 GPRASP1Q5JY77 1395 aa25.45■■□□□ 1.66
CCDC43-201ENST00000315286 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
CCDC43-201ENST00000315286 EFCAB6Q5THR3 1501 aa25.44■■□□□ 1.66
CCDC43-201ENST00000315286 PPRC1Q5VV67 1664 aaKnown RBP25.43■■□□□ 1.66
CCDC43-201ENST00000315286 LMTK2Q8IWU2 1503 aa25.42■■□□□ 1.66
CCDC43-201ENST00000315286 RICTORQ6R327 1708 aa25.42■■□□□ 1.66
CCDC43-201ENST00000315286 PRKRIP1Q9H875 184 aaPredicted RBP25.41■■□□□ 1.66
CCDC43-201ENST00000315286 FAM69CQ0P6D2 419 aa25.41■■□□□ 1.66
CCDC43-201ENST00000315286 LAMC1P11047 1609 aa25.4■■□□□ 1.66
CCDC43-201ENST00000315286 GGT6Q6P531 493 aa25.4■■□□□ 1.66
CCDC43-201ENST00000315286 DIP2BQ9P265 1576 aa25.38■■□□□ 1.65
CCDC43-201ENST00000315286 UGGT1Q9NYU2 1555 aa25.37■■□□□ 1.65
CCDC43-201ENST00000315286 DIP2CQ9Y2E4 1556 aa25.37■■□□□ 1.65
CCDC43-201ENST00000315286 MADDQ8WXG6 1647 aa25.36■■□□□ 1.65
CCDC43-201ENST00000315286 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
CCDC43-201ENST00000315286 NEURL4Q96JN8 1562 aa25.33■■□□□ 1.65
CCDC43-201ENST00000315286 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.64
CCDC43-201ENST00000315286 CCDC184Q52MB2 194 aa25.32■■□□□ 1.64
CCDC43-201ENST00000315286 KIF1BO60333 1816 aa25.31■■□□□ 1.64
CCDC43-201ENST00000315286 YEATS2Q9ULM3 1422 aa25.31■■□□□ 1.64
CCDC43-201ENST00000315286 TSPOAP1O95153 1857 aa25.31■■□□□ 1.64
CCDC43-201ENST00000315286 WASHC2CQ9Y4E1 1318 aa25.31■■□□□ 1.64
CCDC43-201ENST00000315286 NPATQ14207 1427 aa25.31■■□□□ 1.64
CCDC43-201ENST00000315286 ABCC3O15438 1527 aa25.3■■□□□ 1.64
CCDC43-201ENST00000315286 TESK2Q96S53 571 aa25.28■■□□□ 1.64
CCDC43-201ENST00000315286 MROH2AA6NES4 1674 aa25.24■■□□□ 1.63
CCDC43-201ENST00000315286 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
CCDC43-201ENST00000315286 MRS2Q9HD23 443 aa25.22■■□□□ 1.63
CCDC43-201ENST00000315286 ZMYM4Q5VZL5 1548 aa25.22■■□□□ 1.63
CCDC43-201ENST00000315286 COL17A1Q9UMD9 1497 aaPredicted RBP25.22■■□□□ 1.63
CCDC43-201ENST00000315286 CNGB1Q14028 1251 aaPredicted RBP25.22■■□□□ 1.63
CCDC43-201ENST00000315286 IQGAP1P46940 1657 aa25.21■■□□□ 1.63
CCDC43-201ENST00000315286 DISP3Q9P2K9 1392 aa25.21■■□□□ 1.63
CCDC43-201ENST00000315286 IFT172Q9UG01 1749 aa25.21■■□□□ 1.63
CCDC43-201ENST00000315286 MYOM2P54296 1465 aa25.2■■□□□ 1.63
CCDC43-201ENST00000315286 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
CCDC43-201ENST00000315286 KIAA1210Q9ULL0 1709 aa25.19■■□□□ 1.62
CCDC43-201ENST00000315286 ADGRB3O60242 1522 aa25.19■■□□□ 1.62
CCDC43-201ENST00000315286 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
CCDC43-201ENST00000315286 SIGLEC1Q9BZZ2 1709 aa25.18■■□□□ 1.62
CCDC43-201ENST00000315286 TMF1P82094 1093 aa25.17■■□□□ 1.62
CCDC43-201ENST00000315286 HNRNPUQ00839 825 aaKnown RBP eCLIP25.17■■□□□ 1.62
CCDC43-201ENST00000315286 SCAF11Q99590 1463 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms