RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 RRP7AQ9Y3A4 280 aaKnown RBP23.89■■□□□ 1.42
CDK5R1-201ENST00000313401 NCOA1Q15788 1441 aa23.89■■□□□ 1.41
CDK5R1-201ENST00000313401 GOLGA2Q08379 1002 aa23.88■■□□□ 1.41
CDK5R1-201ENST00000313401 MORC1Q86VD1 984 aa23.88■■□□□ 1.41
CDK5R1-201ENST00000313401 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
CDK5R1-201ENST00000313401 PDE3BQ13370 1112 aa23.87■■□□□ 1.41
CDK5R1-201ENST00000313401 STK26Q9P289 416 aa23.87■■□□□ 1.41
CDK5R1-201ENST00000313401 ADAMTS8Q9UP79 889 aa23.86■■□□□ 1.41
CDK5R1-201ENST00000313401 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
CDK5R1-201ENST00000313401 APAF1O14727 1248 aa23.85■■□□□ 1.41
CDK5R1-201ENST00000313401 CLUAP1Q96AJ1 413 aa23.85■■□□□ 1.41
CDK5R1-201ENST00000313401 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
CDK5R1-201ENST00000313401 TRAK1Q9UPV9 953 aa23.84■■□□□ 1.41
CDK5R1-201ENST00000313401 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
CDK5R1-201ENST00000313401 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
CDK5R1-201ENST00000313401 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.41
CDK5R1-201ENST00000313401 RPRD2Q5VT52 1461 aaKnown RBP23.83■■□□□ 1.41
CDK5R1-201ENST00000313401 BCL2L13Q9BXK5 485 aa23.82■■□□□ 1.4
CDK5R1-201ENST00000313401 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
CDK5R1-201ENST00000313401 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
CDK5R1-201ENST00000313401 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
CDK5R1-201ENST00000313401 FTSJ3Q8IY81 847 aaKnown RBP23.81■■□□□ 1.4
CDK5R1-201ENST00000313401 HSP90AA1P07900 732 aaKnown RBP23.8■■□□□ 1.4
CDK5R1-201ENST00000313401 KIAA0586Q9BVV6 1533 aa23.8■■□□□ 1.4
CDK5R1-201ENST00000313401 SPRYD3Q8NCJ5 442 aa23.8■■□□□ 1.4
CDK5R1-201ENST00000313401 KANK1Q14678 1352 aa23.79■■□□□ 1.4
CDK5R1-201ENST00000313401 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
CDK5R1-201ENST00000313401 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
CDK5R1-201ENST00000313401 ARHGEF11O15085 1522 aa23.77■■□□□ 1.4
CDK5R1-201ENST00000313401 CAMSAP2Q08AD1 1489 aa23.77■■□□□ 1.4
CDK5R1-201ENST00000313401 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
CDK5R1-201ENST00000313401 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
CDK5R1-201ENST00000313401 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
CDK5R1-201ENST00000313401 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
CDK5R1-201ENST00000313401 SMG6Q86US8 1419 aaKnown RBP23.74■■□□□ 1.39
CDK5R1-201ENST00000313401 POGKQ9P215 609 aa23.73■■□□□ 1.39
CDK5R1-201ENST00000313401 SLKQ9H2G2 1235 aaPredicted RBP23.72■■□□□ 1.39
CDK5R1-201ENST00000313401 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
CDK5R1-201ENST00000313401 COG6Q9Y2V7 657 aa23.7■■□□□ 1.38
CDK5R1-201ENST00000313401 MAPK8IP3Q9UPT6 1336 aa23.7■■□□□ 1.38
CDK5R1-201ENST00000313401 CFAP70Q5T0N1 1121 aa23.69■■□□□ 1.38
CDK5R1-201ENST00000313401 ESF1Q9H501 851 aaKnown RBP23.69■■□□□ 1.38
CDK5R1-201ENST00000313401 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
CDK5R1-201ENST00000313401 BECN1Q14457 450 aa23.69■■□□□ 1.38
CDK5R1-201ENST00000313401 NUP153P49790 1475 aaKnown RBP23.66■■□□□ 1.38
CDK5R1-201ENST00000313401 PPP2R1AP30153 589 aa23.65■■□□□ 1.38
CDK5R1-201ENST00000313401 GRIN2AQ12879 1464 aa23.65■■□□□ 1.38
CDK5R1-201ENST00000313401 PLEKHG5O94827 1062 aa23.65■■□□□ 1.38
CDK5R1-201ENST00000313401 C20orf194Q5TEA3 1177 aa23.64■■□□□ 1.37
CDK5R1-201ENST00000313401 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
CDK5R1-201ENST00000313401 GPATCH8Q9UKJ3 1502 aaKnown RBP23.63■■□□□ 1.37
CDK5R1-201ENST00000313401 MLECQ14165 292 aa23.63■■□□□ 1.37
CDK5R1-201ENST00000313401 TMEM132EQ6IEE7 984 aa23.63■■□□□ 1.37
CDK5R1-201ENST00000313401 ARHGAP5Q13017 1502 aa23.63■■□□□ 1.37
CDK5R1-201ENST00000313401 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
CDK5R1-201ENST00000313401 SOX12O15370 315 aa23.59■■□□□ 1.37
CDK5R1-201ENST00000313401 CENPQQ7L2Z9 268 aaPredicted RBP23.59■■□□□ 1.37
CDK5R1-201ENST00000313401 BCAR3O75815 825 aa23.58■■□□□ 1.37
CDK5R1-201ENST00000313401 PANK1Q8TE04 598 aa23.58■■□□□ 1.37
CDK5R1-201ENST00000313401 KDM6BO15054 1643 aa23.58■■□□□ 1.36
CDK5R1-201ENST00000313401 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.36
CDK5R1-201ENST00000313401 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
CDK5R1-201ENST00000313401 WASHC2CQ9Y4E1 1318 aa23.57■■□□□ 1.36
CDK5R1-201ENST00000313401 TCOF1Q13428 1488 aaKnown RBP23.57■■□□□ 1.36
CDK5R1-201ENST00000313401 FAM161AQ3B820 660 aa23.55■■□□□ 1.36
CDK5R1-201ENST00000313401 ITPRIPQ8IWB1 547 aa23.54■■□□□ 1.36
CDK5R1-201ENST00000313401 MS4A1P11836 297 aa23.53■■□□□ 1.36
CDK5R1-201ENST00000313401 BACH2Q9BYV9 841 aa23.53■■□□□ 1.36
CDK5R1-201ENST00000313401 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
CDK5R1-201ENST00000313401 SMC4Q9NTJ3 1288 aa23.52■■□□□ 1.36
CDK5R1-201ENST00000313401 E9PSI1 815 aa23.52■■□□□ 1.36
CDK5R1-201ENST00000313401 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
CDK5R1-201ENST00000313401 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
CDK5R1-201ENST00000313401 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
CDK5R1-201ENST00000313401 WDR62O43379 1518 aa23.5■■□□□ 1.35
CDK5R1-201ENST00000313401 GZF1Q9H116 711 aaPredicted RBP23.5■■□□□ 1.35
CDK5R1-201ENST00000313401 PZPP20742 1482 aa23.48■■□□□ 1.35
CDK5R1-201ENST00000313401 ELL2O00472 640 aaPredicted RBP23.47■■□□□ 1.35
CDK5R1-201ENST00000313401 MFAP1P55081 439 aaKnown RBP23.47■■□□□ 1.35
CDK5R1-201ENST00000313401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.47■■□□□ 1.35
CDK5R1-201ENST00000313401 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
CDK5R1-201ENST00000313401 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.46■■□□□ 1.35
CDK5R1-201ENST00000313401 SAMD9Q5K651 1589 aa23.46■■□□□ 1.35
CDK5R1-201ENST00000313401 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
CDK5R1-201ENST00000313401 APBB1O00213 710 aa23.45■■□□□ 1.34
CDK5R1-201ENST00000313401 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
CDK5R1-201ENST00000313401 PLEKHH2Q8IVE3 1493 aa23.44■■□□□ 1.34
CDK5R1-201ENST00000313401 MTHFSP49914 203 aa23.44■■□□□ 1.34
CDK5R1-201ENST00000313401 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
CDK5R1-201ENST00000313401 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
CDK5R1-201ENST00000313401 RAPGEF6Q8TEU7 1601 aa23.43■■□□□ 1.34
CDK5R1-201ENST00000313401 ATP10BO94823 1461 aa23.43■■□□□ 1.34
CDK5R1-201ENST00000313401 CCDC141Q6ZP82 1450 aa23.43■■□□□ 1.34
CDK5R1-201ENST00000313401 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
CDK5R1-201ENST00000313401 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
CDK5R1-201ENST00000313401 CABP2Q9NPB3 220 aa23.42■■□□□ 1.34
CDK5R1-201ENST00000313401 DISP1Q96F81 1524 aa23.41■■□□□ 1.34
CDK5R1-201ENST00000313401 GGNBP2Q9H3C7 697 aa23.41■■□□□ 1.34
CDK5R1-201ENST00000313401 NUTM2FA1L443 756 aa23.4■■□□□ 1.34
CDK5R1-201ENST00000313401 ZBTB7CA1YPR0 619 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms