RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 NUP155O75694 1391 aa40.36■■■■■ 4.05
CGREF1-202ENST00000312734 MLECQ14165 292 aa40.34■■■■■ 4.05
CGREF1-202ENST00000312734 AGLP35573 1532 aa40.34■■■■■ 4.05
CGREF1-202ENST00000312734 ACIN1Q9UKV3 1341 aaKnown RBP40.33■■■■■ 4.05
CGREF1-202ENST00000312734 UNC13BO14795 1591 aa40.29■■■■■ 4.04
CGREF1-202ENST00000312734 BCORL1Q5H9F3 1711 aa40.29■■■■■ 4.04
CGREF1-202ENST00000312734 DEPDC5O75140 1603 aa40.26■■■■■ 4.04
CGREF1-202ENST00000312734 RNF17Q9BXT8 1623 aaKnown RBP40.26■■■■■ 4.03
CGREF1-202ENST00000312734 KANK1Q14678 1352 aa40.25■■■■■ 4.03
CGREF1-202ENST00000312734 MROH1Q8NDA8 1641 aa40.24■■■■■ 4.03
CGREF1-202ENST00000312734 MPHOSPH9Q99550 1183 aa40.24■■■■■ 4.03
CGREF1-202ENST00000312734 SLC4A1APQ9BWU0 796 aaKnown RBP40.24■■■■■ 4.03
CGREF1-202ENST00000312734 PRDM15P57071 1507 aaPredicted RBP40.2■■■■■ 4.03
CGREF1-202ENST00000312734 PZPP20742 1482 aa40.19■■■■■ 4.02
CGREF1-202ENST00000312734 DHX57Q6P158 1386 aaKnown RBP40.18■■■■■ 4.02
CGREF1-202ENST00000312734 WASHC2CQ9Y4E1 1318 aa40.18■■■■■ 4.02
CGREF1-202ENST00000312734 KDM5DQ9BY66 1539 aa40.18■■■■■ 4.02
CGREF1-202ENST00000312734 FAM135AQ9P2D6 1515 aa40.17■■■■■ 4.02
CGREF1-202ENST00000312734 IQGAP3Q86VI3 1631 aa40.14■■■■■ 4.02
CGREF1-202ENST00000312734 CCER1Q8TC90 406 aaPredicted RBP40.12■■■■■ 4.01
CGREF1-202ENST00000312734 VWDEQ8N2E2 1590 aa40.12■■■■■ 4.01
CGREF1-202ENST00000312734 PKD2Q13563 968 aa40.1■■■■■ 4.01
CGREF1-202ENST00000312734 PPP6R1Q9UPN7 881 aa40.1■■■■■ 4.01
CGREF1-202ENST00000312734 FOXD1Q16676 465 aa40.09■■■■■ 4.01
CGREF1-202ENST00000312734 ESF1Q9H501 851 aaKnown RBP40.08■■■■■ 4.01
CGREF1-202ENST00000312734 CEP152O94986 1710 aa40.06■■■■■ 4
CGREF1-202ENST00000312734 ABCC3O15438 1527 aa40.05■■■■■ 4
CGREF1-202ENST00000312734 LMTK2Q8IWU2 1503 aa40■■■■□ 3.99
CGREF1-202ENST00000312734 TET3O43151 1660 aa39.97■■■■□ 3.99
CGREF1-202ENST00000312734 CLTCQ00610 1675 aaKnown RBP39.96■■■■□ 3.99
CGREF1-202ENST00000312734 ZC3H13Q5T200 1668 aaKnown RBP39.96■■■■□ 3.99
CGREF1-202ENST00000312734 CAMSAP1Q5T5Y3 1602 aa39.92■■■■□ 3.98
CGREF1-202ENST00000312734 EFCAB6Q5THR3 1501 aa39.91■■■■□ 3.98
CGREF1-202ENST00000312734 E9PCH4 1651 aa39.9■■■■□ 3.98
CGREF1-202ENST00000312734 ZMYM3Q14202 1370 aa39.87■■■■□ 3.97
CGREF1-202ENST00000312734 NPATQ14207 1427 aa39.87■■■■□ 3.97
CGREF1-202ENST00000312734 CNTLNQ9NXG0 1405 aa39.87■■■■□ 3.97
CGREF1-202ENST00000312734 FER1L4A9Z1Z3 1794 aa39.86■■■■□ 3.97
CGREF1-202ENST00000312734 ARHGAP31Q2M1Z3 1444 aa39.83■■■■□ 3.97
CGREF1-202ENST00000312734 MADDQ8WXG6 1647 aa39.82■■■■□ 3.97
CGREF1-202ENST00000312734 ADAMTSL3P82987 1691 aa39.82■■■■□ 3.97
CGREF1-202ENST00000312734 PLPPR3Q6T4P5 718 aa39.82■■■■□ 3.96
CGREF1-202ENST00000312734 ANKRD30BQ9BXX2 1392 aa39.81■■■■□ 3.96
CGREF1-202ENST00000312734 FBXO31Q5XUX0 539 aaPredicted RBP39.8■■■■□ 3.96
CGREF1-202ENST00000312734 CFAP65Q6ZU64 1925 aaKnown RBP39.79■■■■□ 3.96
CGREF1-202ENST00000312734 CEBPAP49715 358 aaPredicted RBP39.79■■■■□ 3.96
CGREF1-202ENST00000312734 SIN3AQ96ST3 1273 aa39.79■■■■□ 3.96
CGREF1-202ENST00000312734 RPRD2Q5VT52 1461 aaKnown RBP39.78■■■■□ 3.96
CGREF1-202ENST00000312734 CLSPNQ9HAW4 1339 aa39.76■■■■□ 3.96
CGREF1-202ENST00000312734 RIMS1Q86UR5 1692 aaKnown RBP39.75■■■■□ 3.95
CGREF1-202ENST00000312734 PLA2R1Q13018 1463 aa39.74■■■■□ 3.95
CGREF1-202ENST00000312734 MROH2AA6NES4 1674 aa39.73■■■■□ 3.95
CGREF1-202ENST00000312734 NEUROD1Q13562 356 aa39.73■■■■□ 3.95
CGREF1-202ENST00000312734 PTPRTO14522 1441 aa39.71■■■■□ 3.95
CGREF1-202ENST00000312734 SPHKAPQ2M3C7 1700 aa39.68■■■■□ 3.94
CGREF1-202ENST00000312734 NOS1P29475 1434 aa39.66■■■■□ 3.94
CGREF1-202ENST00000312734 C3P01024 1663 aa39.66■■■■□ 3.94
CGREF1-202ENST00000312734 PREX1Q8TCU6 1659 aa39.65■■■■□ 3.94
CGREF1-202ENST00000312734 ERVK-7P63135 1459 aa39.65■■■■□ 3.94
CGREF1-202ENST00000312734 KDM4FA0A1W2PPD8 638 aa39.64■■■■□ 3.94
CGREF1-202ENST00000312734 CCDC144AA2RUR9 1427 aa39.63■■■■□ 3.93
CGREF1-202ENST00000312734 TRPM2O94759 1503 aa39.63■■■■□ 3.93
CGREF1-202ENST00000312734 UGGT1Q9NYU2 1555 aa39.58■■■■□ 3.93
CGREF1-202ENST00000312734 SYNMO15061 1565 aa39.58■■■■□ 3.93
CGREF1-202ENST00000312734 SPATA31D1Q6ZQQ2 1576 aa39.58■■■■□ 3.93
CGREF1-202ENST00000312734 PTPRMP28827 1452 aa39.57■■■■□ 3.92
CGREF1-202ENST00000312734 TNRQ92752 1358 aa39.54■■■■□ 3.92
CGREF1-202ENST00000312734 CLTCL1P53675 1640 aa39.53■■■■□ 3.92
CGREF1-202ENST00000312734 IDI1Q13907 227 aa39.53■■■■□ 3.92
CGREF1-202ENST00000312734 SLC52A1Q9NWF4 448 aa39.52■■■■□ 3.92
CGREF1-202ENST00000312734 CHGAP10645 457 aaKnown RBP39.5■■■■□ 3.91
CGREF1-202ENST00000312734 RGL3Q3MIN7 710 aa39.45■■■■□ 3.91
CGREF1-202ENST00000312734 PIK3C2BO00750 1634 aa39.43■■■■□ 3.9
CGREF1-202ENST00000312734 TONSLQ96HA7 1378 aa39.4■■■■□ 3.9
CGREF1-202ENST00000312734 STAG3Q9UJ98 1225 aa39.4■■■■□ 3.9
CGREF1-202ENST00000312734 KIF1BO60333 1816 aa39.35■■■■□ 3.89
CGREF1-202ENST00000312734 SPATA31E1Q6ZUB1 1445 aa39.34■■■■□ 3.89
CGREF1-202ENST00000312734 L3MBTL2Q969R5 705 aa39.34■■■■□ 3.89
CGREF1-202ENST00000312734 ZNF326Q5BKZ1 582 aaKnown RBP39.33■■■■□ 3.89
CGREF1-202ENST00000312734 NLRP1Q9C000 1473 aa39.32■■■■□ 3.88
CGREF1-202ENST00000312734 TIMELESSQ9UNS1 1208 aa39.29■■■■□ 3.88
CGREF1-202ENST00000312734 ZEB1P37275 1124 aaPredicted RBP39.29■■■■□ 3.88
CGREF1-202ENST00000312734 ADGRB3O60242 1522 aa39.27■■■■□ 3.88
CGREF1-202ENST00000312734 TMEM131LA2VDJ0 1609 aa39.26■■■■□ 3.88
CGREF1-202ENST00000312734 MYO3AQ8NEV4 1616 aa39.26■■■■□ 3.88
CGREF1-202ENST00000312734 DCAF11Q8TEB1 546 aa39.25■■■■□ 3.87
CGREF1-202ENST00000312734 KDM2AQ9Y2K7 1162 aa39.25■■■■□ 3.87
CGREF1-202ENST00000312734 SETD1BQ9UPS6 1966 aaKnown RBP39.25■■■■□ 3.87
CGREF1-202ENST00000312734 A2ML1A8K2U0 1454 aa39.22■■■■□ 3.87
CGREF1-202ENST00000312734 MYO5BQ9ULV0 1848 aa39.2■■■■□ 3.87
CGREF1-202ENST00000312734 NEURL4Q96JN8 1562 aa39.2■■■■□ 3.87
CGREF1-202ENST00000312734 UHRF1BP1Q6BDS2 1440 aa39.18■■■■□ 3.86
CGREF1-202ENST00000312734 CEP170BQ9Y4F5 1589 aaPredicted RBP39.16■■■■□ 3.86
CGREF1-202ENST00000312734 UBR1Q8IWV7 1749 aa39.16■■■■□ 3.86
CGREF1-202ENST00000312734 NUTM2DQ5VT03 806 aaPredicted RBP39.16■■■■□ 3.86
CGREF1-202ENST00000312734 PPP1R15AO75807 674 aaPredicted RBP39.14■■■■□ 3.86
CGREF1-202ENST00000312734 RPGRIP1LQ68CZ1 1315 aa39.14■■■■□ 3.86
CGREF1-202ENST00000312734 THEMISQ8N1K5 641 aaPredicted RBP39.14■■■■□ 3.86
CGREF1-202ENST00000312734 KDM5AP29375 1690 aaKnown RBP39.1■■■■□ 3.85
CGREF1-202ENST00000312734 ZNF142P52746 1687 aaPredicted RBP39.07■■■■□ 3.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms