RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 RNF17Q9BXT8 1623 aaKnown RBP26.42■■□□□ 1.82
SWSAP1-201ENST00000312423 PLPPR3Q6T4P5 718 aa26.41■■□□□ 1.82
SWSAP1-201ENST00000312423 PTPRMP28827 1452 aa26.39■■□□□ 1.82
SWSAP1-201ENST00000312423 CLTCQ00610 1675 aaKnown RBP26.39■■□□□ 1.81
SWSAP1-201ENST00000312423 CNTLNQ9NXG0 1405 aa26.36■■□□□ 1.81
SWSAP1-201ENST00000312423 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.35■■□□□ 1.81
SWSAP1-201ENST00000312423 PPP6R1Q9UPN7 881 aa26.35■■□□□ 1.81
SWSAP1-201ENST00000312423 GCC2Q8IWJ2 1684 aa26.35■■□□□ 1.81
SWSAP1-201ENST00000312423 MROH1Q8NDA8 1641 aa26.34■■□□□ 1.81
SWSAP1-201ENST00000312423 KDM5DQ9BY66 1539 aa26.34■■□□□ 1.81
SWSAP1-201ENST00000312423 WASHC2CQ9Y4E1 1318 aa26.34■■□□□ 1.81
SWSAP1-201ENST00000312423 DEPDC5O75140 1603 aa26.33■■□□□ 1.81
SWSAP1-201ENST00000312423 PRDM15P57071 1507 aaPredicted RBP26.32■■□□□ 1.8
SWSAP1-201ENST00000312423 MROH2AA6NES4 1674 aa26.32■■□□□ 1.8
SWSAP1-201ENST00000312423 NAIPQ13075 1403 aa26.32■■□□□ 1.8
SWSAP1-201ENST00000312423 FAM135AQ9P2D6 1515 aa26.31■■□□□ 1.8
SWSAP1-201ENST00000312423 HFM1A2PYH4 1435 aa26.3■■□□□ 1.8
SWSAP1-201ENST00000312423 C3P01024 1663 aa26.3■■□□□ 1.8
SWSAP1-201ENST00000312423 KANK1Q14678 1352 aa26.3■■□□□ 1.8
SWSAP1-201ENST00000312423 ZC3H13Q5T200 1668 aaKnown RBP26.29■■□□□ 1.8
SWSAP1-201ENST00000312423 CEP152O94986 1710 aa26.29■■□□□ 1.8
SWSAP1-201ENST00000312423 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
SWSAP1-201ENST00000312423 ABCC3O15438 1527 aa26.27■■□□□ 1.8
SWSAP1-201ENST00000312423 ZMYM3Q14202 1370 aa26.26■■□□□ 1.79
SWSAP1-201ENST00000312423 UNC13BO14795 1591 aa26.25■■□□□ 1.79
SWSAP1-201ENST00000312423 CAMSAP1Q5T5Y3 1602 aa26.22■■□□□ 1.79
SWSAP1-201ENST00000312423 VWDEQ8N2E2 1590 aa26.19■■□□□ 1.78
SWSAP1-201ENST00000312423 NUP155O75694 1391 aa26.18■■□□□ 1.78
SWSAP1-201ENST00000312423 PZPP20742 1482 aa26.16■■□□□ 1.78
SWSAP1-201ENST00000312423 SETD5Q9C0A6 1442 aa26.15■■□□□ 1.78
SWSAP1-201ENST00000312423 LMTK2Q8IWU2 1503 aa26.15■■□□□ 1.78
SWSAP1-201ENST00000312423 IQGAP3Q86VI3 1631 aa26.15■■□□□ 1.78
SWSAP1-201ENST00000312423 TRIM52Q96A61 297 aa26.14■■□□□ 1.78
SWSAP1-201ENST00000312423 NPATQ14207 1427 aa26.13■■□□□ 1.77
SWSAP1-201ENST00000312423 TET3O43151 1660 aa26.12■■□□□ 1.77
SWSAP1-201ENST00000312423 EFCAB6Q5THR3 1501 aa26.12■■□□□ 1.77
SWSAP1-201ENST00000312423 CFAP65Q6ZU64 1925 aaKnown RBP26.12■■□□□ 1.77
SWSAP1-201ENST00000312423 TRIM26Q12899 539 aaPredicted RBP26.11■■□□□ 1.77
SWSAP1-201ENST00000312423 FBXO31Q5XUX0 539 aaPredicted RBP26.11■■□□□ 1.77
SWSAP1-201ENST00000312423 PREX1Q8TCU6 1659 aa26.1■■□□□ 1.77
SWSAP1-201ENST00000312423 ARHGAP31Q2M1Z3 1444 aa26.08■■□□□ 1.77
SWSAP1-201ENST00000312423 SETD1BQ9UPS6 1966 aaKnown RBP26.08■■□□□ 1.77
SWSAP1-201ENST00000312423 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
SWSAP1-201ENST00000312423 TNRQ92752 1358 aa26.06■■□□□ 1.76
SWSAP1-201ENST00000312423 UHRF1BP1Q6BDS2 1440 aa26.06■■□□□ 1.76
SWSAP1-201ENST00000312423 ERVK-7P63135 1459 aa26.06■■□□□ 1.76
SWSAP1-201ENST00000312423 MYO3AQ8NEV4 1616 aa26.04■■□□□ 1.76
SWSAP1-201ENST00000312423 SPATA31D1Q6ZQQ2 1576 aa26.03■■□□□ 1.76
SWSAP1-201ENST00000312423 E9PCH4 1651 aa26.03■■□□□ 1.76
SWSAP1-201ENST00000312423 RPRD2Q5VT52 1461 aaKnown RBP26.02■■□□□ 1.76
SWSAP1-201ENST00000312423 LMTK3Q96Q04 1460 aa26.01■■□□□ 1.75
SWSAP1-201ENST00000312423 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
SWSAP1-201ENST00000312423 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
SWSAP1-201ENST00000312423 CEP170BQ9Y4F5 1589 aaPredicted RBP25.95■■□□□ 1.75
SWSAP1-201ENST00000312423 ZNF142P52746 1687 aaPredicted RBP25.95■■□□□ 1.75
SWSAP1-201ENST00000312423 NLRP1Q9C000 1473 aa25.94■■□□□ 1.74
SWSAP1-201ENST00000312423 PKD2Q13563 968 aa25.93■■□□□ 1.74
SWSAP1-201ENST00000312423 SYNMO15061 1565 aa25.93■■□□□ 1.74
SWSAP1-201ENST00000312423 NOS1P29475 1434 aa25.93■■□□□ 1.74
SWSAP1-201ENST00000312423 HSPA2P54652 639 aa25.93■■□□□ 1.74
SWSAP1-201ENST00000312423 A2ML1A8K2U0 1454 aa25.92■■□□□ 1.74
SWSAP1-201ENST00000312423 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
SWSAP1-201ENST00000312423 SPHKAPQ2M3C7 1700 aa25.9■■□□□ 1.74
SWSAP1-201ENST00000312423 HRCP23327 699 aa25.9■■□□□ 1.74
SWSAP1-201ENST00000312423 UGGT1Q9NYU2 1555 aa25.87■■□□□ 1.73
SWSAP1-201ENST00000312423 PIK3C2BO00750 1634 aa25.86■■□□□ 1.73
SWSAP1-201ENST00000312423 FOXD1Q16676 465 aa25.85■■□□□ 1.73
SWSAP1-201ENST00000312423 SLC52A1Q9NWF4 448 aa25.84■■□□□ 1.73
SWSAP1-201ENST00000312423 STAG3Q9UJ98 1225 aa25.84■■□□□ 1.73
SWSAP1-201ENST00000312423 IDI1Q13907 227 aa25.83■■□□□ 1.73
SWSAP1-201ENST00000312423 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
SWSAP1-201ENST00000312423 PTPRTO14522 1441 aa25.81■■□□□ 1.72
SWSAP1-201ENST00000312423 PCGF6Q9BYE7 350 aa25.81■■□□□ 1.72
SWSAP1-201ENST00000312423 TRPM2O94759 1503 aa25.81■■□□□ 1.72
SWSAP1-201ENST00000312423 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
SWSAP1-201ENST00000312423 CHGAP10645 457 aaKnown RBP25.78■■□□□ 1.72
SWSAP1-201ENST00000312423 ADGRB3O60242 1522 aa25.78■■□□□ 1.72
SWSAP1-201ENST00000312423 PLA2R1Q13018 1463 aa25.76■■□□□ 1.71
SWSAP1-201ENST00000312423 CLTCL1P53675 1640 aa25.76■■□□□ 1.71
SWSAP1-201ENST00000312423 KDM5AP29375 1690 aaKnown RBP25.76■■□□□ 1.71
SWSAP1-201ENST00000312423 MYO5BQ9ULV0 1848 aa25.74■■□□□ 1.71
SWSAP1-201ENST00000312423 TMEM131LA2VDJ0 1609 aa25.72■■□□□ 1.71
SWSAP1-201ENST00000312423 STRCQ7RTU9 1775 aa25.72■■□□□ 1.71
SWSAP1-201ENST00000312423 CCDC144AA2RUR9 1427 aa25.7■■□□□ 1.71
SWSAP1-201ENST00000312423 KIF1BO60333 1816 aa25.7■■□□□ 1.7
SWSAP1-201ENST00000312423 POLR1AO95602 1720 aaPredicted RBP25.7■■□□□ 1.7
SWSAP1-201ENST00000312423 NCKAP5LQ9HCH0 1330 aa25.7■■□□□ 1.7
SWSAP1-201ENST00000312423 ANKLE2Q86XL3 938 aa25.68■■□□□ 1.7
SWSAP1-201ENST00000312423 TMEM2Q9UHN6 1383 aa25.66■■□□□ 1.7
SWSAP1-201ENST00000312423 SLIT1O75093 1534 aa25.66■■□□□ 1.7
SWSAP1-201ENST00000312423 ZNF326Q5BKZ1 582 aaKnown RBP25.64■■□□□ 1.7
SWSAP1-201ENST00000312423 EID1Q9Y6B2 187 aa25.64■■□□□ 1.7
SWSAP1-201ENST00000312423 ARHGAP23Q9P227 1491 aa25.64■■□□□ 1.7
SWSAP1-201ENST00000312423 TXNDC2Q86VQ3 553 aa25.63■■□□□ 1.69
SWSAP1-201ENST00000312423 SCAF11Q99590 1463 aaKnown RBP25.62■■□□□ 1.69
SWSAP1-201ENST00000312423 ANKRD30BQ9BXX2 1392 aa25.62■■□□□ 1.69
SWSAP1-201ENST00000312423 DMRT2Q9Y5R5 561 aa25.61■■□□□ 1.69
SWSAP1-201ENST00000312423 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
SWSAP1-201ENST00000312423 NEURL4Q96JN8 1562 aa25.6■■□□□ 1.69
SWSAP1-201ENST00000312423 LTKP29376 864 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms