RNA–Protein interactions for RNA: ENST00000311916.6

TWNK-201, Transcript of twinkle mtDNA helicase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWNK, Length 3,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-201ENST00000311916 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
TWNK-201ENST00000311916 MYT1LQ9UL68 1186 aa15.87■□□□□ 0.13
TWNK-201ENST00000311916 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
TWNK-201ENST00000311916 CROCC2H7BZ55 1655 aa15.85■□□□□ 0.13
TWNK-201ENST00000311916 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
TWNK-201ENST00000311916 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
TWNK-201ENST00000311916 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
TWNK-201ENST00000311916 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
TWNK-201ENST00000311916 ARHGAP5Q13017 1502 aa15.83■□□□□ 0.13
TWNK-201ENST00000311916 SHANK2Q9UPX8 1470 aa15.83■□□□□ 0.12
TWNK-201ENST00000311916 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
TWNK-201ENST00000311916 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
TWNK-201ENST00000311916 ARID4BQ4LE39 1312 aaPredicted RBP15.82■□□□□ 0.12
TWNK-201ENST00000311916 NBPF1Q3BBV0 1214 aa15.81■□□□□ 0.12
TWNK-201ENST00000311916 PKNOX2Q96KN3 472 aa15.81■□□□□ 0.12
TWNK-201ENST00000311916 ERICH6BQ5W0A0 696 aa15.8■□□□□ 0.12
TWNK-201ENST00000311916 BCORL1Q5H9F3 1711 aa15.79■□□□□ 0.12
TWNK-201ENST00000311916 RALGAPBQ86X10 1494 aa15.79■□□□□ 0.12
TWNK-201ENST00000311916 EFCAB2Q5VUJ9 269 aa15.78■□□□□ 0.12
TWNK-201ENST00000311916 NUDCQ9Y266 331 aa15.77■□□□□ 0.12
TWNK-201ENST00000311916 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.12
TWNK-201ENST00000311916 SYCP2Q9BX26 1530 aa15.77■□□□□ 0.12
TWNK-201ENST00000311916 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.11
TWNK-201ENST00000311916 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
TWNK-201ENST00000311916 FAM135AQ9P2D6 1515 aa15.76■□□□□ 0.11
TWNK-201ENST00000311916 KDM5CP41229 1560 aa15.76■□□□□ 0.11
TWNK-201ENST00000311916 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
TWNK-201ENST00000311916 SAMD9LQ8IVG5 1584 aa15.75■□□□□ 0.11
TWNK-201ENST00000311916 RALBP1Q15311 655 aa15.75■□□□□ 0.11
TWNK-201ENST00000311916 MYBBP1AQ9BQG0 1328 aaKnown RBP15.74■□□□□ 0.11
TWNK-201ENST00000311916 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
TWNK-201ENST00000311916 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
TWNK-201ENST00000311916 ARHGEF5Q12774 1597 aa15.73■□□□□ 0.11
TWNK-201ENST00000311916 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
TWNK-201ENST00000311916 POLR1AO95602 1720 aaPredicted RBP15.72■□□□□ 0.11
TWNK-201ENST00000311916 CDC42BPBQ9Y5S2 1711 aa15.72■□□□□ 0.11
TWNK-201ENST00000311916 ARXQ96QS3 562 aa15.72■□□□□ 0.11
TWNK-201ENST00000311916 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.11
TWNK-201ENST00000311916 ABCC2Q92887 1545 aa15.71■□□□□ 0.11
TWNK-201ENST00000311916 AFAP1Q8N556 730 aa15.7■□□□□ 0.1
TWNK-201ENST00000311916 KDM5DQ9BY66 1539 aa15.7■□□□□ 0.1
TWNK-201ENST00000311916 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
TWNK-201ENST00000311916 PREX2Q70Z35 1606 aa15.7■□□□□ 0.1
TWNK-201ENST00000311916 TTC37Q6PGP7 1564 aa15.69■□□□□ 0.1
TWNK-201ENST00000311916 TMF1P82094 1093 aa15.69■□□□□ 0.1
TWNK-201ENST00000311916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.69■□□□□ 0.1
TWNK-201ENST00000311916 SMG6Q86US8 1419 aaKnown RBP15.69■□□□□ 0.1
TWNK-201ENST00000311916 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
TWNK-201ENST00000311916 PANK3Q9H999 370 aa15.69■□□□□ 0.1
TWNK-201ENST00000311916 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
TWNK-201ENST00000311916 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
TWNK-201ENST00000311916 PLA2R1Q13018 1463 aa15.64■□□□□ 0.09
TWNK-201ENST00000311916 A2MP01023 1474 aa15.63■□□□□ 0.09
TWNK-201ENST00000311916 ASXL2Q76L83 1435 aa15.63■□□□□ 0.09
TWNK-201ENST00000311916 KIF3BO15066 747 aa15.62■□□□□ 0.09
TWNK-201ENST00000311916 DISP3Q9P2K9 1392 aa15.62■□□□□ 0.09
TWNK-201ENST00000311916 PLCH2O75038 1416 aa15.62■□□□□ 0.09
TWNK-201ENST00000311916 TRAPPC8Q9Y2L5 1435 aa15.62■□□□□ 0.09
TWNK-201ENST00000311916 MSH5O43196 834 aa15.61■□□□□ 0.09
TWNK-201ENST00000311916 TESK2Q96S53 571 aa15.61■□□□□ 0.09
TWNK-201ENST00000311916 KNSTRNQ9Y448 316 aa15.61■□□□□ 0.09
TWNK-201ENST00000311916 ZCCHC11Q5TAX3 1644 aaKnown RBP15.61■□□□□ 0.09
TWNK-201ENST00000311916 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
TWNK-201ENST00000311916 MYO5CQ9NQX4 1742 aa15.61■□□□□ 0.09
TWNK-201ENST00000311916 DUOX2Q9NRD8 1548 aa15.6■□□□□ 0.09
TWNK-201ENST00000311916 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
TWNK-201ENST00000311916 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
TWNK-201ENST00000311916 PER1O15534 1290 aaPredicted RBP15.59■□□□□ 0.09
TWNK-201ENST00000311916 CHGAP10645 457 aaKnown RBP15.59■□□□□ 0.09
TWNK-201ENST00000311916 FANCIQ9NVI1 1328 aa15.59■□□□□ 0.09
TWNK-201ENST00000311916 CDCA7LQ96GN5 454 aa15.58■□□□□ 0.08
TWNK-201ENST00000311916 PDIA4P13667 645 aaKnown RBP15.58■□□□□ 0.08
TWNK-201ENST00000311916 LRPPRCP42704 1394 aaKnown RBP15.57■□□□□ 0.08
TWNK-201ENST00000311916 RRP1P56182 461 aaKnown RBP15.56■□□□□ 0.08
TWNK-201ENST00000311916 WDR43Q15061 677 aaKnown RBP eCLIP15.56■□□□□ 0.08
TWNK-201ENST00000311916 KANK1Q14678 1352 aa15.56■□□□□ 0.08
TWNK-201ENST00000311916 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
TWNK-201ENST00000311916 WDR7Q9Y4E6 1490 aa15.56■□□□□ 0.08
TWNK-201ENST00000311916 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 MAST1Q9Y2H9 1570 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 GPRASP1Q5JY77 1395 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 UNC13BO14795 1591 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 RIMBP3CA6NJZ7 1639 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 RIMBP3BA6NNM3 1639 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 RIMBP3Q9UFD9 1639 aa15.55■□□□□ 0.08
TWNK-201ENST00000311916 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
TWNK-201ENST00000311916 CDCA8Q53HL2 280 aa15.54■□□□□ 0.08
TWNK-201ENST00000311916 RAPGEF3O95398 923 aa15.53■□□□□ 0.08
TWNK-201ENST00000311916 PDE3BQ13370 1112 aa15.53■□□□□ 0.08
TWNK-201ENST00000311916 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.08
TWNK-201ENST00000311916 RNF123Q5XPI4 1314 aa15.52■□□□□ 0.08
TWNK-201ENST00000311916 WASHC2CQ9Y4E1 1318 aa15.52■□□□□ 0.08
TWNK-201ENST00000311916 SCAPERQ9BY12 1400 aa15.52■□□□□ 0.08
TWNK-201ENST00000311916 PLIN1O60240 522 aa15.52■□□□□ 0.08
TWNK-201ENST00000311916 PLXNC1O60486 1568 aa15.52■□□□□ 0.07
TWNK-201ENST00000311916 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.07
TWNK-201ENST00000311916 PDE4CQ08493 712 aa15.51■□□□□ 0.07
TWNK-201ENST00000311916 ADAMTS8Q9UP79 889 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms