RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
COL6A2-202ENST00000310645 IQGAP2Q13576 1575 aa19.21■□□□□ 0.67
COL6A2-202ENST00000310645 RALGAPBQ86X10 1494 aa19.2■□□□□ 0.66
COL6A2-202ENST00000310645 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
COL6A2-202ENST00000310645 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
COL6A2-202ENST00000310645 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
COL6A2-202ENST00000310645 ANKRD50Q9ULJ7 1429 aa19.19■□□□□ 0.66
COL6A2-202ENST00000310645 PDS5BQ9NTI5 1447 aa19.18■□□□□ 0.66
COL6A2-202ENST00000310645 FAM161AQ3B820 660 aa19.18■□□□□ 0.66
COL6A2-202ENST00000310645 PANK3Q9H999 370 aa19.18■□□□□ 0.66
COL6A2-202ENST00000310645 CAMSAP2Q08AD1 1489 aa19.17■□□□□ 0.66
COL6A2-202ENST00000310645 PARD3Q8TEW0 1356 aa19.17■□□□□ 0.66
COL6A2-202ENST00000310645 PER1O15534 1290 aaPredicted RBP19.16■□□□□ 0.66
COL6A2-202ENST00000310645 ADAMTS8Q9UP79 889 aa19.16■□□□□ 0.66
COL6A2-202ENST00000310645 CENPQQ7L2Z9 268 aaPredicted RBP19.15■□□□□ 0.66
COL6A2-202ENST00000310645 UHRF1BP1Q6BDS2 1440 aa19.15■□□□□ 0.66
COL6A2-202ENST00000310645 C8orf34Q49A92 452 aa19.14■□□□□ 0.65
COL6A2-202ENST00000310645 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
COL6A2-202ENST00000310645 NUP153P49790 1475 aaKnown RBP19.12■□□□□ 0.65
COL6A2-202ENST00000310645 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
COL6A2-202ENST00000310645 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
COL6A2-202ENST00000310645 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
COL6A2-202ENST00000310645 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
COL6A2-202ENST00000310645 ARXQ96QS3 562 aa19.1■□□□□ 0.65
COL6A2-202ENST00000310645 WDR43Q15061 677 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL6A2-202ENST00000310645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.09■□□□□ 0.65
COL6A2-202ENST00000310645 GPATCH8Q9UKJ3 1502 aaKnown RBP19.07■□□□□ 0.64
COL6A2-202ENST00000310645 HNRNPMP52272 730 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL6A2-202ENST00000310645 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
COL6A2-202ENST00000310645 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-202ENST00000310645 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
COL6A2-202ENST00000310645 DUSP27Q5VZP5 1158 aa19.06■□□□□ 0.64
COL6A2-202ENST00000310645 SLKQ9H2G2 1235 aaPredicted RBP19.06■□□□□ 0.64
COL6A2-202ENST00000310645 CCDC146Q8IYE0 955 aa19.05■□□□□ 0.64
COL6A2-202ENST00000310645 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
COL6A2-202ENST00000310645 POGKQ9P215 609 aa19.04■□□□□ 0.64
COL6A2-202ENST00000310645 UBE2Q2Q8WVN8 375 aa19.03■□□□□ 0.64
COL6A2-202ENST00000310645 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
COL6A2-202ENST00000310645 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
COL6A2-202ENST00000310645 TMF1P82094 1093 aa19.02■□□□□ 0.64
COL6A2-202ENST00000310645 FBLN2P98095 1184 aa19.02■□□□□ 0.63
COL6A2-202ENST00000310645 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
COL6A2-202ENST00000310645 TESK2Q96S53 571 aa19.01■□□□□ 0.63
COL6A2-202ENST00000310645 KNSTRNQ9Y448 316 aa19.01■□□□□ 0.63
COL6A2-202ENST00000310645 C9orf84Q5VXU9 1444 aa19.01■□□□□ 0.63
COL6A2-202ENST00000310645 PLEKHD1A6NEE1 506 aa19■□□□□ 0.63
COL6A2-202ENST00000310645 BCAR3O75815 825 aa19■□□□□ 0.63
COL6A2-202ENST00000310645 ADGRL2O95490 1459 aa19■□□□□ 0.63
COL6A2-202ENST00000310645 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
COL6A2-202ENST00000310645 DISP1Q96F81 1524 aa18.99■□□□□ 0.63
COL6A2-202ENST00000310645 ADGBQ8N7X0 1667 aa18.99■□□□□ 0.63
COL6A2-202ENST00000310645 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
COL6A2-202ENST00000310645 E9PCH4 1651 aa18.98■□□□□ 0.63
COL6A2-202ENST00000310645 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
COL6A2-202ENST00000310645 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
COL6A2-202ENST00000310645 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
COL6A2-202ENST00000310645 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
COL6A2-202ENST00000310645 SEC24BO95487 1268 aa18.97■□□□□ 0.63
COL6A2-202ENST00000310645 ZMYM4Q5VZL5 1548 aa18.97■□□□□ 0.63
COL6A2-202ENST00000310645 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
COL6A2-202ENST00000310645 IGHDP01880 384 aa18.96■□□□□ 0.63
COL6A2-202ENST00000310645 RSPH6AQ9H0K4 717 aa18.96■□□□□ 0.63
COL6A2-202ENST00000310645 SPINK5Q9NQ38 1064 aaPredicted RBP18.96■□□□□ 0.63
COL6A2-202ENST00000310645 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
COL6A2-202ENST00000310645 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
COL6A2-202ENST00000310645 CANXP27824 592 aaKnown RBP18.96■□□□□ 0.63
COL6A2-202ENST00000310645 KIAA0556O60303 1618 aa18.95■□□□□ 0.62
COL6A2-202ENST00000310645 APAF1O14727 1248 aa18.95■□□□□ 0.62
COL6A2-202ENST00000310645 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
COL6A2-202ENST00000310645 ERBINQ96RT1 1412 aa18.94■□□□□ 0.62
COL6A2-202ENST00000310645 SLFN5Q08AF3 891 aa18.94■□□□□ 0.62
COL6A2-202ENST00000310645 BECN1Q14457 450 aa18.92■□□□□ 0.62
COL6A2-202ENST00000310645 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
COL6A2-202ENST00000310645 COL17A1Q9UMD9 1497 aaPredicted RBP18.91■□□□□ 0.62
COL6A2-202ENST00000310645 COG6Q9Y2V7 657 aa18.91■□□□□ 0.62
COL6A2-202ENST00000310645 ITSN2Q9NZM3 1697 aa18.91■□□□□ 0.62
COL6A2-202ENST00000310645 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
COL6A2-202ENST00000310645 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
COL6A2-202ENST00000310645 GZF1Q9H116 711 aaPredicted RBP18.9■□□□□ 0.62
COL6A2-202ENST00000310645 RRAGDQ9NQL2 400 aaPredicted RBP18.9■□□□□ 0.62
COL6A2-202ENST00000310645 USP19O94966 1318 aa18.9■□□□□ 0.62
COL6A2-202ENST00000310645 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
COL6A2-202ENST00000310645 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
COL6A2-202ENST00000310645 KDM5DQ9BY66 1539 aa18.88■□□□□ 0.61
COL6A2-202ENST00000310645 ZNF521Q96K83 1311 aa18.88■□□□□ 0.61
COL6A2-202ENST00000310645 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
COL6A2-202ENST00000310645 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
COL6A2-202ENST00000310645 CROCC2H7BZ55 1655 aa18.86■□□□□ 0.61
COL6A2-202ENST00000310645 INSRP06213 1382 aa18.86■□□□□ 0.61
COL6A2-202ENST00000310645 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
COL6A2-202ENST00000310645 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
COL6A2-202ENST00000310645 A2MP01023 1474 aa18.84■□□□□ 0.61
COL6A2-202ENST00000310645 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.6
COL6A2-202ENST00000310645 L1TD1Q5T7N2 865 aaKnown RBP18.83■□□□□ 0.6
COL6A2-202ENST00000310645 CLUAP1Q96AJ1 413 aa18.83■□□□□ 0.6
COL6A2-202ENST00000310645 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.6
COL6A2-202ENST00000310645 GPRASP1Q5JY77 1395 aa18.83■□□□□ 0.6
COL6A2-202ENST00000310645 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
COL6A2-202ENST00000310645 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
COL6A2-202ENST00000310645 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms