RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 UHRF1BP1LA0JNW5 1464 aa23.91■■□□□ 1.42
SPSB4-201ENST00000310546 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
SPSB4-201ENST00000310546 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.41
SPSB4-201ENST00000310546 SKAP1Q86WV1 359 aa23.89■■□□□ 1.41
SPSB4-201ENST00000310546 DDRGK1Q96HY6 314 aa23.88■■□□□ 1.41
SPSB4-201ENST00000310546 CDC42BPAQ5VT25 1732 aa23.88■■□□□ 1.41
SPSB4-201ENST00000310546 MS4A1P11836 297 aa23.88■■□□□ 1.41
SPSB4-201ENST00000310546 DAXXQ9UER7 740 aaPredicted RBP23.88■■□□□ 1.41
SPSB4-201ENST00000310546 TMC1Q8TDI8 760 aa23.87■■□□□ 1.41
SPSB4-201ENST00000310546 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
SPSB4-201ENST00000310546 DENND4BO75064 1496 aaPredicted RBP23.86■■□□□ 1.41
SPSB4-201ENST00000310546 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
SPSB4-201ENST00000310546 ABCC10Q5T3U5 1492 aa23.85■■□□□ 1.41
SPSB4-201ENST00000310546 PNISRQ8TF01 805 aaKnown RBP23.83■■□□□ 1.41
SPSB4-201ENST00000310546 ZCCHC11Q5TAX3 1644 aaKnown RBP23.82■■□□□ 1.4
SPSB4-201ENST00000310546 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
SPSB4-201ENST00000310546 RCAN3Q9UKA8 241 aa23.81■■□□□ 1.4
SPSB4-201ENST00000310546 PKNOX2Q96KN3 472 aa23.79■■□□□ 1.4
SPSB4-201ENST00000310546 SLC4A1APQ9BWU0 796 aaKnown RBP23.79■■□□□ 1.4
SPSB4-201ENST00000310546 DHX29Q7Z478 1369 aaKnown RBP23.78■■□□□ 1.4
SPSB4-201ENST00000310546 TSPY4P0CV99 314 aa23.78■■□□□ 1.4
SPSB4-201ENST00000310546 TSPY10P0CW01 314 aa23.78■■□□□ 1.4
SPSB4-201ENST00000310546 CROCC2H7BZ55 1655 aa23.77■■□□□ 1.4
SPSB4-201ENST00000310546 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
SPSB4-201ENST00000310546 FAM43AQ8N2R8 423 aa23.75■■□□□ 1.39
SPSB4-201ENST00000310546 ADGBQ8N7X0 1667 aa23.75■■□□□ 1.39
SPSB4-201ENST00000310546 FRAT2O75474 233 aaPredicted RBP23.74■■□□□ 1.39
SPSB4-201ENST00000310546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.74■■□□□ 1.39
SPSB4-201ENST00000310546 SPATA31E1Q6ZUB1 1445 aa23.73■■□□□ 1.39
SPSB4-201ENST00000310546 PLIN1O60240 522 aa23.72■■□□□ 1.39
SPSB4-201ENST00000310546 CDC42BPBQ9Y5S2 1711 aa23.71■■□□□ 1.39
SPSB4-201ENST00000310546 ZNF326Q5BKZ1 582 aaKnown RBP23.7■■□□□ 1.39
SPSB4-201ENST00000310546 ADGRL2O95490 1459 aa23.69■■□□□ 1.38
SPSB4-201ENST00000310546 NPM1P06748 294 aaKnown RBP eCLIP23.69■■□□□ 1.38
SPSB4-201ENST00000310546 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
SPSB4-201ENST00000310546 TTC37Q6PGP7 1564 aa23.67■■□□□ 1.38
SPSB4-201ENST00000310546 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
SPSB4-201ENST00000310546 C9orf84Q5VXU9 1444 aa23.66■■□□□ 1.38
SPSB4-201ENST00000310546 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
SPSB4-201ENST00000310546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.38
SPSB4-201ENST00000310546 AFAP1Q8N556 730 aa23.65■■□□□ 1.38
SPSB4-201ENST00000310546 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
SPSB4-201ENST00000310546 MBD5Q9P267 1494 aa23.62■■□□□ 1.37
SPSB4-201ENST00000310546 ANKRD50Q9ULJ7 1429 aa23.62■■□□□ 1.37
SPSB4-201ENST00000310546 ANKRD30BQ9BXX2 1392 aa23.62■■□□□ 1.37
SPSB4-201ENST00000310546 PKD2Q13563 968 aa23.62■■□□□ 1.37
SPSB4-201ENST00000310546 CDCA7LQ96GN5 454 aa23.62■■□□□ 1.37
SPSB4-201ENST00000310546 WDR7Q9Y4E6 1490 aa23.61■■□□□ 1.37
SPSB4-201ENST00000310546 CRBNQ96SW2 442 aa23.61■■□□□ 1.37
SPSB4-201ENST00000310546 PZPP20742 1482 aa23.61■■□□□ 1.37
SPSB4-201ENST00000310546 SHANK2Q9UPX8 1470 aa23.61■■□□□ 1.37
SPSB4-201ENST00000310546 GLIPR1L2Q4G1C9 344 aa23.6■■□□□ 1.37
SPSB4-201ENST00000310546 ARHGAP5Q13017 1502 aa23.59■■□□□ 1.37
SPSB4-201ENST00000310546 RPRD2Q5VT52 1461 aaKnown RBP23.58■■□□□ 1.37
SPSB4-201ENST00000310546 USP47Q96K76 1375 aa23.58■■□□□ 1.37
SPSB4-201ENST00000310546 ARHGEF5Q12774 1597 aa23.58■■□□□ 1.37
SPSB4-201ENST00000310546 LRPPRCP42704 1394 aaKnown RBP23.57■■□□□ 1.36
SPSB4-201ENST00000310546 TEX14Q8IWB6 1497 aa23.57■■□□□ 1.36
SPSB4-201ENST00000310546 NUP155O75694 1391 aa23.56■■□□□ 1.36
SPSB4-201ENST00000310546 VSIG10Q8N0Z9 540 aa23.56■■□□□ 1.36
SPSB4-201ENST00000310546 SYCP2Q9BX26 1530 aa23.56■■□□□ 1.36
SPSB4-201ENST00000310546 MYO5CQ9NQX4 1742 aa23.56■■□□□ 1.36
SPSB4-201ENST00000310546 POLR1AO95602 1720 aaPredicted RBP23.55■■□□□ 1.36
SPSB4-201ENST00000310546 CCDC141Q6ZP82 1450 aa23.55■■□□□ 1.36
SPSB4-201ENST00000310546 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
SPSB4-201ENST00000310546 RRAGDQ9NQL2 400 aaPredicted RBP23.55■■□□□ 1.36
SPSB4-201ENST00000310546 KIF15Q9NS87 1388 aa23.54■■□□□ 1.36
SPSB4-201ENST00000310546 POGKQ9P215 609 aa23.52■■□□□ 1.36
SPSB4-201ENST00000310546 MYBBP1AQ9BQG0 1328 aaKnown RBP23.52■■□□□ 1.36
SPSB4-201ENST00000310546 FAM161AQ3B820 660 aa23.51■■□□□ 1.35
SPSB4-201ENST00000310546 ARXQ96QS3 562 aa23.51■■□□□ 1.35
SPSB4-201ENST00000310546 ZMYND15Q9H091 742 aa23.51■■□□□ 1.35
SPSB4-201ENST00000310546 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
SPSB4-201ENST00000310546 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
SPSB4-201ENST00000310546 BRD4O60885 1362 aaPredicted RBP23.5■■□□□ 1.35
SPSB4-201ENST00000310546 C20orf194Q5TEA3 1177 aa23.49■■□□□ 1.35
SPSB4-201ENST00000310546 C8orf34Q49A92 452 aa23.49■■□□□ 1.35
SPSB4-201ENST00000310546 BCORL1Q5H9F3 1711 aa23.48■■□□□ 1.35
SPSB4-201ENST00000310546 RSPH4AQ5TD94 716 aa23.48■■□□□ 1.35
SPSB4-201ENST00000310546 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
SPSB4-201ENST00000310546 RGS3P49796 1198 aa23.47■■□□□ 1.35
SPSB4-201ENST00000310546 NAP1L5Q96NT1 182 aaPredicted RBP23.46■■□□□ 1.35
SPSB4-201ENST00000310546 RGL3Q3MIN7 710 aa23.46■■□□□ 1.35
SPSB4-201ENST00000310546 PLCH2O75038 1416 aa23.45■■□□□ 1.34
SPSB4-201ENST00000310546 RALBP1Q15311 655 aa23.45■■□□□ 1.34
SPSB4-201ENST00000310546 ARHGEF12Q9NZN5 1544 aa23.44■■□□□ 1.34
SPSB4-201ENST00000310546 ABCA9Q8IUA7 1624 aa23.44■■□□□ 1.34
SPSB4-201ENST00000310546 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
SPSB4-201ENST00000310546 ARID4BQ4LE39 1312 aaPredicted RBP23.43■■□□□ 1.34
SPSB4-201ENST00000310546 TRAPPC8Q9Y2L5 1435 aa23.43■■□□□ 1.34
SPSB4-201ENST00000310546 DIP2BQ9P265 1576 aa23.43■■□□□ 1.34
SPSB4-201ENST00000310546 ROCK2O75116 1388 aaKnown RBP23.42■■□□□ 1.34
SPSB4-201ENST00000310546 CENPQQ7L2Z9 268 aaPredicted RBP23.42■■□□□ 1.34
SPSB4-201ENST00000310546 KDM2BQ8NHM5 1336 aa23.41■■□□□ 1.34
SPSB4-201ENST00000310546 HSP90AA2PQ14568 343 aaPredicted RBP23.39■■□□□ 1.34
SPSB4-201ENST00000310546 NLRP13Q86W25 1043 aa23.39■■□□□ 1.33
SPSB4-201ENST00000310546 PLEKHH2Q8IVE3 1493 aa23.39■■□□□ 1.33
SPSB4-201ENST00000310546 CARD11Q9BXL7 1154 aa23.39■■□□□ 1.33
SPSB4-201ENST00000310546 SPAG9O60271 1321 aaKnown RBP23.38■■□□□ 1.33
SPSB4-201ENST00000310546 SLKQ9H2G2 1235 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms