RNA–Protein interactions for RNA: ENST00000308924.8

U2AF2-201, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF2, Length 1,698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-201ENST00000308924 SUPT16HQ9Y5B9 1047 aaKnown RBP24.27■■□□□ 1.48
U2AF2-201ENST00000308924 PLCH2O75038 1416 aa24.27■■□□□ 1.48
U2AF2-201ENST00000308924 ABCC1P33527 1531 aa24.27■■□□□ 1.48
U2AF2-201ENST00000308924 ARID4BQ4LE39 1312 aaPredicted RBP24.25■■□□□ 1.47
U2AF2-201ENST00000308924 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
U2AF2-201ENST00000308924 USP47Q96K76 1375 aa24.21■■□□□ 1.47
U2AF2-201ENST00000308924 KIF7Q2M1P5 1343 aa24.2■■□□□ 1.46
U2AF2-201ENST00000308924 BCORL1Q5H9F3 1711 aa24.19■■□□□ 1.46
U2AF2-201ENST00000308924 C11orf95C9JLR9 678 aaPredicted RBP24.18■■□□□ 1.46
U2AF2-201ENST00000308924 ATP10AO60312 1499 aa24.17■■□□□ 1.46
U2AF2-201ENST00000308924 LAMC1P11047 1609 aa24.17■■□□□ 1.46
U2AF2-201ENST00000308924 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
U2AF2-201ENST00000308924 ROCK2O75116 1388 aaKnown RBP24.14■■□□□ 1.45
U2AF2-201ENST00000308924 TRPM1Q7Z4N2 1603 aa24.13■■□□□ 1.45
U2AF2-201ENST00000308924 RTEL1-TNFRSF6BF6WH68 1400 aa24.12■■□□□ 1.45
U2AF2-201ENST00000308924 EFCAB2Q5VUJ9 269 aa24.12■■□□□ 1.45
U2AF2-201ENST00000308924 PRKRIP1Q9H875 184 aaPredicted RBP24.12■■□□□ 1.45
U2AF2-201ENST00000308924 PPRC1Q5VV67 1664 aaKnown RBP24.12■■□□□ 1.45
U2AF2-201ENST00000308924 CCDC144AA2RUR9 1427 aa24.12■■□□□ 1.45
U2AF2-201ENST00000308924 GLI2P10070 1586 aa24.11■■□□□ 1.45
U2AF2-201ENST00000308924 ABCA9Q8IUA7 1624 aa24.1■■□□□ 1.45
U2AF2-201ENST00000308924 EIF2AK4Q9P2K8 1649 aaKnown RBP24.1■■□□□ 1.45
U2AF2-201ENST00000308924 WDR7Q9Y4E6 1490 aa24.08■■□□□ 1.45
U2AF2-201ENST00000308924 PLA2R1Q13018 1463 aa24.08■■□□□ 1.44
U2AF2-201ENST00000308924 ZFYVE16Q7Z3T8 1539 aa24.08■■□□□ 1.44
U2AF2-201ENST00000308924 DEPDC5O75140 1603 aa24.07■■□□□ 1.44
U2AF2-201ENST00000308924 HECW2Q9P2P5 1572 aa24.07■■□□□ 1.44
U2AF2-201ENST00000308924 ASXL2Q76L83 1435 aa24.06■■□□□ 1.44
U2AF2-201ENST00000308924 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
U2AF2-201ENST00000308924 E9PCH4 1651 aa24.06■■□□□ 1.44
U2AF2-201ENST00000308924 DHX29Q7Z478 1369 aaKnown RBP24.05■■□□□ 1.44
U2AF2-201ENST00000308924 INO80Q9ULG1 1556 aaPredicted RBP24.04■■□□□ 1.44
U2AF2-201ENST00000308924 GPRASP1Q5JY77 1395 aa24.03■■□□□ 1.44
U2AF2-201ENST00000308924 TRAPPC8Q9Y2L5 1435 aa24.02■■□□□ 1.44
U2AF2-201ENST00000308924 A2MP01023 1474 aa24.01■■□□□ 1.43
U2AF2-201ENST00000308924 NEFLP07196 543 aa24.01■■□□□ 1.43
U2AF2-201ENST00000308924 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
U2AF2-201ENST00000308924 PRDM15P57071 1507 aaPredicted RBP23.99■■□□□ 1.43
U2AF2-201ENST00000308924 RNF17Q9BXT8 1623 aaKnown RBP23.99■■□□□ 1.43
U2AF2-201ENST00000308924 ZNF326Q5BKZ1 582 aaKnown RBP23.99■■□□□ 1.43
U2AF2-201ENST00000308924 HNRNPUQ00839 825 aaKnown RBP eCLIP23.98■■□□□ 1.43
U2AF2-201ENST00000308924 TET3O43151 1660 aa23.96■■□□□ 1.43
U2AF2-201ENST00000308924 COL17A1Q9UMD9 1497 aaPredicted RBP23.96■■□□□ 1.43
U2AF2-201ENST00000308924 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
U2AF2-201ENST00000308924 TRPM2O94759 1503 aa23.96■■□□□ 1.43
U2AF2-201ENST00000308924 MAP3K4Q9Y6R4 1608 aa23.96■■□□□ 1.43
U2AF2-201ENST00000308924 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.43
U2AF2-201ENST00000308924 ATP7AQ04656 1500 aa23.95■■□□□ 1.43
U2AF2-201ENST00000308924 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.42
U2AF2-201ENST00000308924 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.42
U2AF2-201ENST00000308924 CEP152O94986 1710 aa23.93■■□□□ 1.42
U2AF2-201ENST00000308924 SPHKAPQ2M3C7 1700 aa23.93■■□□□ 1.42
U2AF2-201ENST00000308924 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
U2AF2-201ENST00000308924 FANCAO15360 1455 aa23.92■■□□□ 1.42
U2AF2-201ENST00000308924 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
U2AF2-201ENST00000308924 FKBP8Q14318 412 aa23.92■■□□□ 1.42
U2AF2-201ENST00000308924 ZBED9Q6R2W3 1325 aa23.91■■□□□ 1.42
U2AF2-201ENST00000308924 CFAP74Q9C0B2 1584 aa23.89■■□□□ 1.41
U2AF2-201ENST00000308924 PTPRTO14522 1441 aa23.89■■□□□ 1.41
U2AF2-201ENST00000308924 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
U2AF2-201ENST00000308924 KDM2AQ9Y2K7 1162 aa23.87■■□□□ 1.41
U2AF2-201ENST00000308924 MADDQ8WXG6 1647 aa23.86■■□□□ 1.41
U2AF2-201ENST00000308924 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.413e-7■■■□□ 14.7
U2AF2-201ENST00000308924 ST20-MTHFSA0A0A6YYL1 179 aa23.85■■□□□ 1.41
U2AF2-201ENST00000308924 STAC3Q96MF2 364 aa23.85■■□□□ 1.41
U2AF2-201ENST00000308924 ERICH6BQ5W0A0 696 aa23.83■■□□□ 1.41
U2AF2-201ENST00000308924 IQGAP1P46940 1657 aa23.82■■□□□ 1.4
U2AF2-201ENST00000308924 MROH1Q8NDA8 1641 aa23.82■■□□□ 1.4
U2AF2-201ENST00000308924 KIAA1210Q9ULL0 1709 aa23.81■■□□□ 1.4
U2AF2-201ENST00000308924 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
U2AF2-201ENST00000308924 KANK1Q14678 1352 aa23.8■■□□□ 1.4
U2AF2-201ENST00000308924 FBXO41Q8TF61 875 aa23.78■■□□□ 1.4
U2AF2-201ENST00000308924 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
U2AF2-201ENST00000308924 KIDINS220Q9ULH0 1771 aa23.77■■□□□ 1.4
U2AF2-201ENST00000308924 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
U2AF2-201ENST00000308924 RALBP1Q15311 655 aa23.77■■□□□ 1.4
U2AF2-201ENST00000308924 LMTK2Q8IWU2 1503 aa23.77■■□□□ 1.4
U2AF2-201ENST00000308924 FAM9BQ8IZU0 186 aa23.76■■□□□ 1.39
U2AF2-201ENST00000308924 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
U2AF2-201ENST00000308924 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
U2AF2-201ENST00000308924 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
U2AF2-201ENST00000308924 WASHC2CQ9Y4E1 1318 aa23.73■■□□□ 1.39
U2AF2-201ENST00000308924 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
U2AF2-201ENST00000308924 MYBBP1AQ9BQG0 1328 aaKnown RBP23.72■■□□□ 1.39
U2AF2-201ENST00000308924 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
U2AF2-201ENST00000308924 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
U2AF2-201ENST00000308924 SMG6Q86US8 1419 aaKnown RBP23.71■■□□□ 1.39
U2AF2-201ENST00000308924 PARD3Q8TEW0 1356 aa23.71■■□□□ 1.39
U2AF2-201ENST00000308924 ZMYM4Q5VZL5 1548 aa23.71■■□□□ 1.39
U2AF2-201ENST00000308924 MYOM2P54296 1465 aa23.7■■□□□ 1.38
U2AF2-201ENST00000308924 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
U2AF2-201ENST00000308924 TESK2Q96S53 571 aa23.7■■□□□ 1.38
U2AF2-201ENST00000308924 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.38
U2AF2-201ENST00000308924 BCANQ96GW7 911 aa23.69■■□□□ 1.38
U2AF2-201ENST00000308924 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
U2AF2-201ENST00000308924 KIF1BO60333 1816 aa23.68■■□□□ 1.38
U2AF2-201ENST00000308924 INSRP06213 1382 aa23.67■■□□□ 1.38
U2AF2-201ENST00000308924 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
U2AF2-201ENST00000308924 MLH3Q9UHC1 1453 aa23.66■■□□□ 1.38
U2AF2-201ENST00000308924 POGZQ7Z3K3 1410 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms