RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 RNF17Q9BXT8 1623 aaKnown RBP33.48■■■□□ 2.95
SNUPN-201ENST00000308588 ESF1Q9H501 851 aaKnown RBP33.46■■■□□ 2.95
SNUPN-201ENST00000308588 CNTLNQ9NXG0 1405 aa33.43■■■□□ 2.94
SNUPN-201ENST00000308588 AEBP2Q6ZN18 517 aaPredicted RBP33.43■■■□□ 2.94
SNUPN-201ENST00000308588 MROH1Q8NDA8 1641 aa33.42■■■□□ 2.94
SNUPN-201ENST00000308588 NAIPQ13075 1403 aa33.39■■■□□ 2.94
SNUPN-201ENST00000308588 CLTCQ00610 1675 aaKnown RBP33.38■■■□□ 2.93
SNUPN-201ENST00000308588 DEPDC5O75140 1603 aa33.38■■■□□ 2.93
SNUPN-201ENST00000308588 WASHC2CQ9Y4E1 1318 aa33.37■■■□□ 2.93
SNUPN-201ENST00000308588 CEBPAP49715 358 aaPredicted RBP33.37■■■□□ 2.93
SNUPN-201ENST00000308588 FAM135AQ9P2D6 1515 aa33.36■■■□□ 2.93
SNUPN-201ENST00000308588 PRDM15P57071 1507 aaPredicted RBP33.36■■■□□ 2.93
SNUPN-201ENST00000308588 KDM5DQ9BY66 1539 aa33.36■■■□□ 2.93
SNUPN-201ENST00000308588 HFM1A2PYH4 1435 aa33.36■■■□□ 2.93
SNUPN-201ENST00000308588 ZMYM3Q14202 1370 aa33.35■■■□□ 2.93
SNUPN-201ENST00000308588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.35■■■□□ 2.93
SNUPN-201ENST00000308588 PLPPR3Q6T4P5 718 aa33.34■■■□□ 2.93
SNUPN-201ENST00000308588 MROH2AA6NES4 1674 aa33.34■■■□□ 2.93
SNUPN-201ENST00000308588 C3P01024 1663 aa33.31■■■□□ 2.92
SNUPN-201ENST00000308588 GCC2Q8IWJ2 1684 aa33.31■■■□□ 2.92
SNUPN-201ENST00000308588 ABCC3O15438 1527 aa33.31■■■□□ 2.92
SNUPN-201ENST00000308588 VWDEQ8N2E2 1590 aa33.27■■■□□ 2.92
SNUPN-201ENST00000308588 KANK1Q14678 1352 aa33.27■■■□□ 2.92
SNUPN-201ENST00000308588 ZC3H13Q5T200 1668 aaKnown RBP33.27■■■□□ 2.92
SNUPN-201ENST00000308588 UNC13BO14795 1591 aa33.25■■■□□ 2.91
SNUPN-201ENST00000308588 CEP152O94986 1710 aa33.24■■■□□ 2.91
SNUPN-201ENST00000308588 LMTK2Q8IWU2 1503 aa33.2■■■□□ 2.9
SNUPN-201ENST00000308588 PZPP20742 1482 aa33.18■■■□□ 2.9
SNUPN-201ENST00000308588 CAMSAP1Q5T5Y3 1602 aa33.17■■■□□ 2.9
SNUPN-201ENST00000308588 NUP155O75694 1391 aa33.17■■■□□ 2.9
SNUPN-201ENST00000308588 NPATQ14207 1427 aa33.16■■■□□ 2.9
SNUPN-201ENST00000308588 FBXO31Q5XUX0 539 aaPredicted RBP33.15■■■□□ 2.9
SNUPN-201ENST00000308588 SETD5Q9C0A6 1442 aa33.14■■■□□ 2.9
SNUPN-201ENST00000308588 ARHGAP31Q2M1Z3 1444 aa33.13■■■□□ 2.89
SNUPN-201ENST00000308588 IQGAP3Q86VI3 1631 aa33.11■■■□□ 2.89
SNUPN-201ENST00000308588 SETD1BQ9UPS6 1966 aaKnown RBP33.11■■■□□ 2.89
SNUPN-201ENST00000308588 EFCAB6Q5THR3 1501 aa33.08■■■□□ 2.89
SNUPN-201ENST00000308588 TET3O43151 1660 aa33.06■■■□□ 2.88
SNUPN-201ENST00000308588 TRIM52Q96A61 297 aa33.06■■■□□ 2.88
SNUPN-201ENST00000308588 TRIM26Q12899 539 aaPredicted RBP33.05■■■□□ 2.88
SNUPN-201ENST00000308588 ERVK-7P63135 1459 aa33.03■■■□□ 2.88
SNUPN-201ENST00000308588 RAB3GAP2Q9H2M9 1393 aa33.03■■■□□ 2.88
SNUPN-201ENST00000308588 SPATA31D1Q6ZQQ2 1576 aa33.03■■■□□ 2.88
SNUPN-201ENST00000308588 LMTK3Q96Q04 1460 aa33.03■■■□□ 2.88
SNUPN-201ENST00000308588 CFAP65Q6ZU64 1925 aaKnown RBP33.03■■■□□ 2.88
SNUPN-201ENST00000308588 TNRQ92752 1358 aa33.03■■■□□ 2.88
SNUPN-201ENST00000308588 PREX1Q8TCU6 1659 aa33.02■■■□□ 2.88
SNUPN-201ENST00000308588 UHRF1BP1Q6BDS2 1440 aa33■■■□□ 2.87
SNUPN-201ENST00000308588 RPRD2Q5VT52 1461 aaKnown RBP32.99■■■□□ 2.87
SNUPN-201ENST00000308588 E9PCH4 1651 aa32.96■■■□□ 2.87
SNUPN-201ENST00000308588 MYO3AQ8NEV4 1616 aa32.95■■■□□ 2.87
SNUPN-201ENST00000308588 ACIN1Q9UKV3 1341 aaKnown RBP32.94■■■□□ 2.86
SNUPN-201ENST00000308588 NOS1P29475 1434 aa32.94■■■□□ 2.86
SNUPN-201ENST00000308588 HRCP23327 699 aa32.92■■■□□ 2.86
SNUPN-201ENST00000308588 SLC4A1APQ9BWU0 796 aaKnown RBP32.92■■■□□ 2.86
SNUPN-201ENST00000308588 HSPA2P54652 639 aa32.89■■■□□ 2.86
SNUPN-201ENST00000308588 NLRP1Q9C000 1473 aa32.89■■■□□ 2.86
SNUPN-201ENST00000308588 CEP170BQ9Y4F5 1589 aaPredicted RBP32.88■■■□□ 2.85
SNUPN-201ENST00000308588 PKD2Q13563 968 aa32.87■■■□□ 2.85
SNUPN-201ENST00000308588 SYNMO15061 1565 aa32.87■■■□□ 2.85
SNUPN-201ENST00000308588 A2ML1A8K2U0 1454 aa32.87■■■□□ 2.85
SNUPN-201ENST00000308588 MPHOSPH9Q99550 1183 aa32.87■■■□□ 2.85
SNUPN-201ENST00000308588 ZNF142P52746 1687 aaPredicted RBP32.86■■■□□ 2.85
SNUPN-201ENST00000308588 IDI1Q13907 227 aa32.82■■■□□ 2.84
SNUPN-201ENST00000308588 PTPRTO14522 1441 aa32.8■■■□□ 2.84
SNUPN-201ENST00000308588 SLC52A1Q9NWF4 448 aa32.8■■■□□ 2.84
SNUPN-201ENST00000308588 UGGT1Q9NYU2 1555 aa32.77■■■□□ 2.84
SNUPN-201ENST00000308588 FOXD1Q16676 465 aa32.77■■■□□ 2.84
SNUPN-201ENST00000308588 SPHKAPQ2M3C7 1700 aa32.75■■■□□ 2.83
SNUPN-201ENST00000308588 PIK3C2BO00750 1634 aa32.74■■■□□ 2.83
SNUPN-201ENST00000308588 PLA2R1Q13018 1463 aa32.74■■■□□ 2.83
SNUPN-201ENST00000308588 THEMISQ8N1K5 641 aaPredicted RBP32.72■■■□□ 2.83
SNUPN-201ENST00000308588 UBR1Q8IWV7 1749 aa32.71■■■□□ 2.83
SNUPN-201ENST00000308588 TRPM2O94759 1503 aa32.69■■■□□ 2.82
SNUPN-201ENST00000308588 STAG3Q9UJ98 1225 aa32.67■■■□□ 2.82
SNUPN-201ENST00000308588 KDM5AP29375 1690 aaKnown RBP32.65■■■□□ 2.82
SNUPN-201ENST00000308588 ADGRB3O60242 1522 aa32.64■■■□□ 2.82
SNUPN-201ENST00000308588 STRCQ7RTU9 1775 aa32.63■■■□□ 2.81
SNUPN-201ENST00000308588 PCGF6Q9BYE7 350 aa32.63■■■□□ 2.81
SNUPN-201ENST00000308588 CLTCL1P53675 1640 aa32.62■■■□□ 2.81
SNUPN-201ENST00000308588 TMEM131LA2VDJ0 1609 aa32.61■■■□□ 2.81
SNUPN-201ENST00000308588 NCKAP5LQ9HCH0 1330 aa32.6■■■□□ 2.81
SNUPN-201ENST00000308588 CHGAP10645 457 aaKnown RBP32.58■■■□□ 2.81
SNUPN-201ENST00000308588 ARHGAP23Q9P227 1491 aa32.58■■■□□ 2.81
SNUPN-201ENST00000308588 SLIT1O75093 1534 aa32.57■■■□□ 2.81
SNUPN-201ENST00000308588 TMEM2Q9UHN6 1383 aa32.57■■■□□ 2.8
SNUPN-201ENST00000308588 ANKLE2Q86XL3 938 aa32.56■■■□□ 2.8
SNUPN-201ENST00000308588 MYO5BQ9ULV0 1848 aa32.55■■■□□ 2.8
SNUPN-201ENST00000308588 ANKRD30BQ9BXX2 1392 aa32.54■■■□□ 2.8
SNUPN-201ENST00000308588 CCDC144AA2RUR9 1427 aa32.53■■■□□ 2.8
SNUPN-201ENST00000308588 LTKP29376 864 aa32.52■■■□□ 2.8
SNUPN-201ENST00000308588 TXNDC2Q86VQ3 553 aa32.5■■■□□ 2.79
SNUPN-201ENST00000308588 DMRT2Q9Y5R5 561 aa32.49■■■□□ 2.79
SNUPN-201ENST00000308588 NEURL4Q96JN8 1562 aa32.49■■■□□ 2.79
SNUPN-201ENST00000308588 POLR1AO95602 1720 aaPredicted RBP32.49■■■□□ 2.79
SNUPN-201ENST00000308588 ZFYVE9O95405 1425 aa32.47■■■□□ 2.79
SNUPN-201ENST00000308588 EID1Q9Y6B2 187 aa32.47■■■□□ 2.79
SNUPN-201ENST00000308588 SCAF11Q99590 1463 aaKnown RBP32.47■■■□□ 2.79
SNUPN-201ENST00000308588 KIF1BO60333 1816 aa32.47■■■□□ 2.79
SNUPN-201ENST00000308588 RIMS2Q9UQ26 1411 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms