RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 GSE1Q14687 1217 aa21.6■■□□□ 1.05
CCDC8-201ENST00000307522 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 EXOC6Q8TAG9 804 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 CARD11Q9BXL7 1154 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 KDM5BQ9UGL1 1544 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 SYCP2Q9BX26 1530 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
CCDC8-201ENST00000307522 CYB5RLQ6IPT4 315 aa21.58■■□□□ 1.04
CCDC8-201ENST00000307522 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.04
CCDC8-201ENST00000307522 WASHC2CQ9Y4E1 1318 aa21.57■■□□□ 1.04
CCDC8-201ENST00000307522 GCC2Q8IWJ2 1684 aa21.57■■□□□ 1.04
CCDC8-201ENST00000307522 NBPF1Q3BBV0 1214 aa21.56■■□□□ 1.04
CCDC8-201ENST00000307522 TTC37Q6PGP7 1564 aa21.56■■□□□ 1.04
CCDC8-201ENST00000307522 NFKBIBQ15653 356 aa21.55■■□□□ 1.04
CCDC8-201ENST00000307522 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
CCDC8-201ENST00000307522 PLEKHH2Q8IVE3 1493 aa21.54■■□□□ 1.04
CCDC8-201ENST00000307522 NPM1P06748 294 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC8-201ENST00000307522 MBD5Q9P267 1494 aa21.53■■□□□ 1.04
CCDC8-201ENST00000307522 KIAA1107Q9UPP5 1409 aa21.53■■□□□ 1.04
CCDC8-201ENST00000307522 ST20-MTHFSA0A0A6YYL1 179 aa21.53■■□□□ 1.04
CCDC8-201ENST00000307522 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
CCDC8-201ENST00000307522 KIF7Q2M1P5 1343 aa21.52■■□□□ 1.04
CCDC8-201ENST00000307522 RPRD2Q5VT52 1461 aaKnown RBP21.52■■□□□ 1.04
CCDC8-201ENST00000307522 KIF3BO15066 747 aa21.52■■□□□ 1.04
CCDC8-201ENST00000307522 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.52■■□□□ 1.04
CCDC8-201ENST00000307522 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
CCDC8-201ENST00000307522 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
CCDC8-201ENST00000307522 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
CCDC8-201ENST00000307522 SAMD9LQ8IVG5 1584 aa21.5■■□□□ 1.03
CCDC8-201ENST00000307522 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
CCDC8-201ENST00000307522 ITSN2Q9NZM3 1697 aa21.49■■□□□ 1.03
CCDC8-201ENST00000307522 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
CCDC8-201ENST00000307522 ABCC2Q92887 1545 aa21.47■■□□□ 1.03
CCDC8-201ENST00000307522 CCDC141Q6ZP82 1450 aa21.47■■□□□ 1.03
CCDC8-201ENST00000307522 USP35Q9P2H5 1018 aa21.47■■□□□ 1.03
CCDC8-201ENST00000307522 GGT6Q6P531 493 aa21.46■■□□□ 1.03
CCDC8-201ENST00000307522 PLIN1O60240 522 aa21.46■■□□□ 1.03
CCDC8-201ENST00000307522 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
CCDC8-201ENST00000307522 BACH2Q9BYV9 841 aa21.46■■□□□ 1.03
CCDC8-201ENST00000307522 VSIG10Q8N0Z9 540 aa21.45■■□□□ 1.02
CCDC8-201ENST00000307522 USP47Q96K76 1375 aa21.45■■□□□ 1.02
CCDC8-201ENST00000307522 FRAT2O75474 233 aaPredicted RBP21.44■■□□□ 1.02
CCDC8-201ENST00000307522 TEX14Q8IWB6 1497 aa21.44■■□□□ 1.02
CCDC8-201ENST00000307522 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
CCDC8-201ENST00000307522 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
CCDC8-201ENST00000307522 SCAPERQ9BY12 1400 aa21.44■■□□□ 1.02
CCDC8-201ENST00000307522 CCDC7Q96M83 1385 aa21.43■■□□□ 1.02
CCDC8-201ENST00000307522 DAXXQ9UER7 740 aaPredicted RBP21.43■■□□□ 1.02
CCDC8-201ENST00000307522 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
CCDC8-201ENST00000307522 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.01
CCDC8-201ENST00000307522 ARID4BQ4LE39 1312 aaPredicted RBP21.38■■□□□ 1.01
CCDC8-201ENST00000307522 ROCK2O75116 1388 aaKnown RBP21.38■■□□□ 1.01
CCDC8-201ENST00000307522 ADGRL2O95490 1459 aa21.38■■□□□ 1.01
CCDC8-201ENST00000307522 CCDC144AA2RUR9 1427 aa21.37■■□□□ 1.01
CCDC8-201ENST00000307522 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
CCDC8-201ENST00000307522 ZCCHC11Q5TAX3 1644 aaKnown RBP21.36■■□□□ 1.01
CCDC8-201ENST00000307522 PLCH2O75038 1416 aa21.36■■□□□ 1.01
CCDC8-201ENST00000307522 RSPH4AQ5TD94 716 aa21.35■■□□□ 1.01
CCDC8-201ENST00000307522 ZMYND15Q9H091 742 aa21.34■■□□□ 1.01
CCDC8-201ENST00000307522 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
CCDC8-201ENST00000307522 SHROOM2Q13796 1616 aa21.34■■□□□ 1.01
CCDC8-201ENST00000307522 ASXL2Q76L83 1435 aa21.33■■□□□ 1.01
CCDC8-201ENST00000307522 RRP1P56182 461 aaKnown RBP21.33■■□□□ 1.01
CCDC8-201ENST00000307522 TMC1Q8TDI8 760 aa21.33■■□□□ 1
CCDC8-201ENST00000307522 RSPH6AQ9H0K4 717 aa21.32■■□□□ 1
CCDC8-201ENST00000307522 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
CCDC8-201ENST00000307522 FAM135AQ9P2D6 1515 aa21.31■■□□□ 1
CCDC8-201ENST00000307522 ADGBQ8N7X0 1667 aa21.3■■□□□ 1
CCDC8-201ENST00000307522 RNF123Q5XPI4 1314 aa21.3■■□□□ 1
CCDC8-201ENST00000307522 PREX2Q70Z35 1606 aa21.3■■□□□ 1
CCDC8-201ENST00000307522 RRAGDQ9NQL2 400 aaPredicted RBP21.3■■□□□ 1
CCDC8-201ENST00000307522 CROCC2H7BZ55 1655 aa21.29■■□□□ 1
CCDC8-201ENST00000307522 FANCAO15360 1455 aa21.28■■□□□ 1
CCDC8-201ENST00000307522 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
CCDC8-201ENST00000307522 CDCA7LQ96GN5 454 aa21.27■■□□□ 1
CCDC8-201ENST00000307522 RCAN3Q9UKA8 241 aa21.27■□□□□ 0.99
CCDC8-201ENST00000307522 NAP1L5Q96NT1 182 aaPredicted RBP21.26■□□□□ 0.99
CCDC8-201ENST00000307522 POGKQ9P215 609 aa21.26■□□□□ 0.99
CCDC8-201ENST00000307522 PLA2R1Q13018 1463 aa21.26■□□□□ 0.99
CCDC8-201ENST00000307522 MLECQ14165 292 aa21.25■□□□□ 0.99
CCDC8-201ENST00000307522 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
CCDC8-201ENST00000307522 SHANK2Q9UPX8 1470 aa21.24■□□□□ 0.99
CCDC8-201ENST00000307522 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
CCDC8-201ENST00000307522 RGS3P49796 1198 aa21.23■□□□□ 0.99
CCDC8-201ENST00000307522 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
CCDC8-201ENST00000307522 ADGRL1O94910 1474 aa21.22■□□□□ 0.99
CCDC8-201ENST00000307522 FAM43AQ8N2R8 423 aa21.22■□□□□ 0.99
CCDC8-201ENST00000307522 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
CCDC8-201ENST00000307522 MYO5CQ9NQX4 1742 aa21.21■□□□□ 0.99
CCDC8-201ENST00000307522 CRBNQ96SW2 442 aa21.21■□□□□ 0.99
CCDC8-201ENST00000307522 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
CCDC8-201ENST00000307522 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC8-201ENST00000307522 CFAP65Q6ZU64 1925 aaKnown RBP21.19■□□□□ 0.98
CCDC8-201ENST00000307522 CFAP70Q5T0N1 1121 aa21.19■□□□□ 0.98
CCDC8-201ENST00000307522 C20orf194Q5TEA3 1177 aa21.18■□□□□ 0.98
CCDC8-201ENST00000307522 SLKQ9H2G2 1235 aaPredicted RBP21.17■□□□□ 0.98
CCDC8-201ENST00000307522 ARHGEF5Q12774 1597 aa21.17■□□□□ 0.98
CCDC8-201ENST00000307522 FAM69CQ0P6D2 419 aa21.17■□□□□ 0.98
CCDC8-201ENST00000307522 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
CCDC8-201ENST00000307522 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms