RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 RAD54L2Q9Y4B4 1467 aa7.04□□□□□ -1.28
USP8-201ENST00000307179 FAM161AQ3B820 660 aa7.04□□□□□ -1.28
USP8-201ENST00000307179 KDM2BQ8NHM5 1336 aa7.04□□□□□ -1.28
USP8-201ENST00000307179 ZNF608Q9ULD9 1512 aaPredicted RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 EXOC6Q8TAG9 804 aa7.03□□□□□ -1.28
USP8-201ENST00000307179 NPM2Q86SE8 214 aaKnown RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 PRDM15P57071 1507 aaPredicted RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 RRP7BPQ9NSQ0 103 aa7.03□□□□□ -1.28
USP8-201ENST00000307179 KIAA0556O60303 1618 aa7.03□□□□□ -1.28
USP8-201ENST00000307179 TARBP1Q13395 1621 aaKnown RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 RNF17Q9BXT8 1623 aaKnown RBP7.03□□□□□ -1.28
USP8-201ENST00000307179 FRAT1Q92837 279 aaPredicted RBP7.02□□□□□ -1.29
USP8-201ENST00000307179 COL17A1Q9UMD9 1497 aaPredicted RBP7.02□□□□□ -1.29
USP8-201ENST00000307179 P3H3Q8IVL6 736 aa7.02□□□□□ -1.29
USP8-201ENST00000307179 ISY1Q9ULR0 285 aaKnown RBP7.02□□□□□ -1.29
USP8-201ENST00000307179 NUP160Q12769 1436 aa7.02□□□□□ -1.29
USP8-201ENST00000307179 SCAPERQ9BY12 1400 aa7.02□□□□□ -1.29
USP8-201ENST00000307179 ARHGEF5Q12774 1597 aa7.02□□□□□ -1.29
USP8-201ENST00000307179 AAMPQ13685 434 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 BRPF3Q9ULD4 1205 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 ANKRD30AQ9BXX3 1397 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 CDC42BPAQ5VT25 1732 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 BECN1Q14457 450 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 GPRASP1Q5JY77 1395 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 PTPRGP23470 1445 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 CDK13Q14004 1512 aaKnown RBP7.01□□□□□ -1.29
USP8-201ENST00000307179 ABCC2Q92887 1545 aa7.01□□□□□ -1.29
USP8-201ENST00000307179 NGEFQ8N5V2 710 aa7□□□□□ -1.29
USP8-201ENST00000307179 SLC4A1APQ9BWU0 796 aaKnown RBP7□□□□□ -1.29
USP8-201ENST00000307179 RTN4Q9NQC3 1192 aaKnown RBP7□□□□□ -1.29
USP8-201ENST00000307179 MYO5CQ9NQX4 1742 aa7□□□□□ -1.29
USP8-201ENST00000307179 RRP9O43818 475 aaKnown RBP7□□□□□ -1.29
USP8-201ENST00000307179 KIAA0586Q9BVV6 1533 aa6.99□□□□□ -1.29
USP8-201ENST00000307179 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.99□□□□□ -1.29
USP8-201ENST00000307179 URB2Q14146 1524 aaKnown RBP6.99□□□□□ -1.29
USP8-201ENST00000307179 ABCC10Q5T3U5 1492 aa6.99□□□□□ -1.29
USP8-201ENST00000307179 UNC13BO14795 1591 aa6.99□□□□□ -1.29
USP8-201ENST00000307179 SYNMO15061 1565 aa6.99□□□□□ -1.29
USP8-201ENST00000307179 TROQ12816 1431 aaPredicted RBP6.98□□□□□ -1.29
USP8-201ENST00000307179 MAPK8IP3Q9UPT6 1336 aa6.98□□□□□ -1.29
USP8-201ENST00000307179 PKNOX2Q96KN3 472 aa6.98□□□□□ -1.29
USP8-201ENST00000307179 MAST1Q9Y2H9 1570 aa6.97□□□□□ -1.29
USP8-201ENST00000307179 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
USP8-201ENST00000307179 CCDC141Q6ZP82 1450 aa6.96□□□□□ -1.29
USP8-201ENST00000307179 NUP153P49790 1475 aaKnown RBP6.96□□□□□ -1.29
USP8-201ENST00000307179 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.29
USP8-201ENST00000307179 PTMSP20962 102 aa6.96□□□□□ -1.29
USP8-201ENST00000307179 CENPJQ9HC77 1338 aaPredicted RBP6.96□□□□□ -1.3
USP8-201ENST00000307179 IQGAP1P46940 1657 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 CLCN1P35523 988 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 SHROOM2Q13796 1616 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 PIK3C2GO75747 1445 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 SYNJ2O15056 1496 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 CRBNQ96SW2 442 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 CHIC2Q9UKJ5 165 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 PRAG1Q86YV5 1406 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 ANKRD50Q9ULJ7 1429 aa6.96□□□□□ -1.3
USP8-201ENST00000307179 NPC1L1Q9UHC9 1359 aa6.95□□□□□ -1.3
USP8-201ENST00000307179 KIAA1210Q9ULL0 1709 aa6.95□□□□□ -1.3
USP8-201ENST00000307179 CARD11Q9BXL7 1154 aa6.95□□□□□ -1.3
USP8-201ENST00000307179 IQGAP3Q86VI3 1631 aa6.95□□□□□ -1.3
USP8-201ENST00000307179 NLRP1Q9C000 1473 aa6.94□□□□□ -1.3
USP8-201ENST00000307179 GPATCH8Q9UKJ3 1502 aaKnown RBP6.94□□□□□ -1.3
USP8-201ENST00000307179 PDS5BQ9NTI5 1447 aa6.94□□□□□ -1.3
USP8-201ENST00000307179 ATP10AO60312 1499 aa6.93□□□□□ -1.3
USP8-201ENST00000307179 NKTRP30414 1462 aaKnown RBP6.93□□□□□ -1.3
USP8-201ENST00000307179 TPM2P07951 284 aa6.93□□□□□ -1.3
USP8-201ENST00000307179 CGNL1Q0VF96 1302 aa6.93□□□□□ -1.3
USP8-201ENST00000307179 NEURL4Q96JN8 1562 aa6.93□□□□□ -1.3
USP8-201ENST00000307179 HSP90AA1P07900 732 aaKnown RBP6.93□□□□□ -1.3
USP8-201ENST00000307179 DISP1Q96F81 1524 aa6.93□□□□□ -1.3
USP8-201ENST00000307179 ZNF521Q96K83 1311 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 FSD2A1L4K1 749 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 FRAT2O75474 233 aaPredicted RBP6.92□□□□□ -1.3
USP8-201ENST00000307179 PNNQ9H307 717 aaKnown RBP6.92□□□□□ -1.3
USP8-201ENST00000307179 FAM135AQ9P2D6 1515 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 ERBINQ96RT1 1412 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 DNAJC5Q9H3Z4 198 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 UPF2Q9HAU5 1272 aaKnown RBP6.92□□□□□ -1.3
USP8-201ENST00000307179 GOLGA6L3A6NEY3 463 aa6.92□□□□□ -1.3
USP8-201ENST00000307179 KDM5AP29375 1690 aaKnown RBP6.92□□□□□ -1.3
USP8-201ENST00000307179 C9orf84Q5VXU9 1444 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 DUOX2Q9NRD8 1548 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 MRE11P49959 708 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 ASXL1Q8IXJ9 1541 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 SPHKAPQ2M3C7 1700 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 TERF1P54274 439 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 MYOM1P52179 1685 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 PREX2Q70Z35 1606 aa6.91□□□□□ -1.3
USP8-201ENST00000307179 PER1O15534 1290 aaPredicted RBP6.9□□□□□ -1.3
USP8-201ENST00000307179 PKD2Q13563 968 aa6.9□□□□□ -1.3
USP8-201ENST00000307179 PDE3AQ14432 1141 aa6.9□□□□□ -1.3
USP8-201ENST00000307179 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
USP8-201ENST00000307179 FOXD1Q16676 465 aa6.9□□□□□ -1.3
USP8-201ENST00000307179 REREQ9P2R6 1566 aa6.9□□□□□ -1.3
USP8-201ENST00000307179 DDX11L8A8MPP1 907 aa6.9□□□□□ -1.31
USP8-201ENST00000307179 MAGI2Q86UL8 1455 aa6.9□□□□□ -1.31
USP8-201ENST00000307179 SLC24A1O60721 1099 aa6.9□□□□□ -1.31
USP8-201ENST00000307179 GOLGA2Q08379 1002 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms