RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FAM135AQ9P2D6 1515 aa25.39■■□□□ 1.66
KRT28-201ENST00000306658 MAGI2Q86UL8 1455 aa25.38■■□□□ 1.65
KRT28-201ENST00000306658 EIF2AK4Q9P2K8 1649 aaKnown RBP25.38■■□□□ 1.65
KRT28-201ENST00000306658 A2MP01023 1474 aa25.38■■□□□ 1.65
KRT28-201ENST00000306658 IQGAP3Q86VI3 1631 aa25.36■■□□□ 1.65
KRT28-201ENST00000306658 KIF3BO15066 747 aa25.36■■□□□ 1.65
KRT28-201ENST00000306658 TONSLQ96HA7 1378 aa25.34■■□□□ 1.65
KRT28-201ENST00000306658 FRMPD1Q5SYB0 1578 aa25.34■■□□□ 1.65
KRT28-201ENST00000306658 ZMYM4Q5VZL5 1548 aa25.34■■□□□ 1.65
KRT28-201ENST00000306658 ABCA6Q8N139 1617 aa25.33■■□□□ 1.65
KRT28-201ENST00000306658 DEPDC5O75140 1603 aa25.32■■□□□ 1.64
KRT28-201ENST00000306658 KANK1Q14678 1352 aa25.31■■□□□ 1.64
KRT28-201ENST00000306658 DIP2CQ9Y2E4 1556 aa25.29■■□□□ 1.64
KRT28-201ENST00000306658 RPRD2Q5VT52 1461 aaKnown RBP25.27■■□□□ 1.64
KRT28-201ENST00000306658 TRHP20396 242 aaPredicted RBP25.27■■□□□ 1.64
KRT28-201ENST00000306658 YEATS2Q9ULM3 1422 aa25.25■■□□□ 1.63
KRT28-201ENST00000306658 PRDM15P57071 1507 aaPredicted RBP25.25■■□□□ 1.63
KRT28-201ENST00000306658 BCORL1Q5H9F3 1711 aa25.24■■□□□ 1.63
KRT28-201ENST00000306658 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
KRT28-201ENST00000306658 RNF17Q9BXT8 1623 aaKnown RBP25.23■■□□□ 1.63
KRT28-201ENST00000306658 VWDEQ8N2E2 1590 aa25.23■■□□□ 1.63
KRT28-201ENST00000306658 COL17A1Q9UMD9 1497 aaPredicted RBP25.22■■□□□ 1.63
KRT28-201ENST00000306658 MROH1Q8NDA8 1641 aa25.2■■□□□ 1.63
KRT28-201ENST00000306658 ATP10AO60312 1499 aa25.2■■□□□ 1.62
KRT28-201ENST00000306658 TET3O43151 1660 aa25.18■■□□□ 1.62
KRT28-201ENST00000306658 GGT6Q6P531 493 aa25.17■■□□□ 1.62
KRT28-201ENST00000306658 L3MBTL2Q969R5 705 aa25.14■■□□□ 1.62
KRT28-201ENST00000306658 CCDC144AA2RUR9 1427 aa25.14■■□□□ 1.61
KRT28-201ENST00000306658 LMTK2Q8IWU2 1503 aa25.14■■□□□ 1.61
KRT28-201ENST00000306658 REREQ9P2R6 1566 aa25.14■■□□□ 1.61
KRT28-201ENST00000306658 E9PCH4 1651 aa25.13■■□□□ 1.61
KRT28-201ENST00000306658 PLA2R1Q13018 1463 aa25.12■■□□□ 1.61
KRT28-201ENST00000306658 ZNF316A6NFI3 1004 aaPredicted RBP25.1■■□□□ 1.61
KRT28-201ENST00000306658 WASHC2CQ9Y4E1 1318 aa25.1■■□□□ 1.61
KRT28-201ENST00000306658 ARHGEF40Q8TER5 1519 aa25.09■■□□□ 1.61
KRT28-201ENST00000306658 AGLP35573 1532 aa25.08■■□□□ 1.61
KRT28-201ENST00000306658 EFCAB6Q5THR3 1501 aa25.07■■□□□ 1.6
KRT28-201ENST00000306658 CEP152O94986 1710 aa25.07■■□□□ 1.6
KRT28-201ENST00000306658 PTPRTO14522 1441 aa25.06■■□□□ 1.6
KRT28-201ENST00000306658 ABCC3O15438 1527 aa25.04■■□□□ 1.6
KRT28-201ENST00000306658 SPHKAPQ2M3C7 1700 aa25.04■■□□□ 1.6
KRT28-201ENST00000306658 TRPM2O94759 1503 aa25.03■■□□□ 1.6
KRT28-201ENST00000306658 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
KRT28-201ENST00000306658 ZC3H13Q5T200 1668 aaKnown RBP25.02■■□□□ 1.6
KRT28-201ENST00000306658 NPATQ14207 1427 aa24.97■■□□□ 1.59
KRT28-201ENST00000306658 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
KRT28-201ENST00000306658 ARHGAP31Q2M1Z3 1444 aa24.95■■□□□ 1.59
KRT28-201ENST00000306658 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
KRT28-201ENST00000306658 DCAF11Q8TEB1 546 aa24.93■■□□□ 1.58
KRT28-201ENST00000306658 SIGLEC1Q9BZZ2 1709 aa24.92■■□□□ 1.58
KRT28-201ENST00000306658 CLTCL1P53675 1640 aa24.92■■□□□ 1.58
KRT28-201ENST00000306658 NBPF8Q3BBV2 869 aa24.91■■□□□ 1.58
KRT28-201ENST00000306658 CNTLNQ9NXG0 1405 aa24.91■■□□□ 1.58
KRT28-201ENST00000306658 UHRF1BP1Q6BDS2 1440 aa24.89■■□□□ 1.58
KRT28-201ENST00000306658 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.58
KRT28-201ENST00000306658 CFAP65Q6ZU64 1925 aaKnown RBP24.89■■□□□ 1.58
KRT28-201ENST00000306658 ARID4BQ4LE39 1312 aaPredicted RBP24.89■■□□□ 1.57
KRT28-201ENST00000306658 MLECQ14165 292 aa24.88■■□□□ 1.57
KRT28-201ENST00000306658 KDM2AQ9Y2K7 1162 aa24.88■■□□□ 1.57
KRT28-201ENST00000306658 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
KRT28-201ENST00000306658 NOS1P29475 1434 aa24.87■■□□□ 1.57
KRT28-201ENST00000306658 ESF1Q9H501 851 aaKnown RBP24.86■■□□□ 1.57
KRT28-201ENST00000306658 NEURL4Q96JN8 1562 aa24.86■■□□□ 1.57
KRT28-201ENST00000306658 STAC3Q96MF2 364 aa24.85■■□□□ 1.57
KRT28-201ENST00000306658 KIF1BO60333 1816 aa24.84■■□□□ 1.57
KRT28-201ENST00000306658 UGGT1Q9NYU2 1555 aa24.83■■□□□ 1.56
KRT28-201ENST00000306658 CLTCQ00610 1675 aaKnown RBP24.82■■□□□ 1.56
KRT28-201ENST00000306658 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
KRT28-201ENST00000306658 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
KRT28-201ENST00000306658 SLC52A1Q9NWF4 448 aa24.78■■□□□ 1.56
KRT28-201ENST00000306658 PRAG1Q86YV5 1406 aa24.78■■□□□ 1.56
KRT28-201ENST00000306658 PREX1Q8TCU6 1659 aa24.78■■□□□ 1.56
KRT28-201ENST00000306658 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
KRT28-201ENST00000306658 SYNMO15061 1565 aa24.77■■□□□ 1.56
KRT28-201ENST00000306658 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
KRT28-201ENST00000306658 CHGAP10645 457 aaKnown RBP24.75■■□□□ 1.55
KRT28-201ENST00000306658 ADGRB3O60242 1522 aa24.74■■□□□ 1.55
KRT28-201ENST00000306658 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
KRT28-201ENST00000306658 HSPA5P11021 654 aaKnown RBP24.73■■□□□ 1.55
KRT28-201ENST00000306658 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
KRT28-201ENST00000306658 ZMYM3Q14202 1370 aa24.73■■□□□ 1.55
KRT28-201ENST00000306658 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
KRT28-201ENST00000306658 IDI1Q13907 227 aa24.72■■□□□ 1.55
KRT28-201ENST00000306658 CARD11Q9BXL7 1154 aa24.7■■□□□ 1.54
KRT28-201ENST00000306658 RPGRIP1LQ68CZ1 1315 aa24.7■■□□□ 1.54
KRT28-201ENST00000306658 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
KRT28-201ENST00000306658 ROCK2O75116 1388 aaKnown RBP24.69■■□□□ 1.54
KRT28-201ENST00000306658 TRPM1Q7Z4N2 1603 aa24.69■■□□□ 1.54
KRT28-201ENST00000306658 SPATA31D1Q6ZQQ2 1576 aa24.68■■□□□ 1.54
KRT28-201ENST00000306658 MYOM2P54296 1465 aa24.67■■□□□ 1.54
KRT28-201ENST00000306658 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
KRT28-201ENST00000306658 USP47Q96K76 1375 aa24.65■■□□□ 1.54
KRT28-201ENST00000306658 IFT172Q9UG01 1749 aa24.64■■□□□ 1.54
KRT28-201ENST00000306658 GPRASP1Q5JY77 1395 aa24.63■■□□□ 1.53
KRT28-201ENST00000306658 NBPF1Q3BBV0 1214 aa24.61■■□□□ 1.53
KRT28-201ENST00000306658 STAG3Q9UJ98 1225 aa24.6■■□□□ 1.53
KRT28-201ENST00000306658 PPLO60437 1756 aa24.6■■□□□ 1.53
KRT28-201ENST00000306658 TMEM131LA2VDJ0 1609 aa24.59■■□□□ 1.53
KRT28-201ENST00000306658 LAMC1P11047 1609 aa24.59■■□□□ 1.53
KRT28-201ENST00000306658 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms