RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
ERCC1-202ENST00000300853 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
ERCC1-202ENST00000300853 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.012e-7■■■■■ 39
ERCC1-202ENST00000300853 CUX1P39880 1505 aa14.98□□□□□ -0.01
ERCC1-202ENST00000300853 APAF1O14727 1248 aa14.97□□□□□ -0.01
ERCC1-202ENST00000300853 MCM4P33991 863 aa14.97□□□□□ -0.01
ERCC1-202ENST00000300853 PTPRKQ15262 1439 aa14.97□□□□□ -0.01
ERCC1-202ENST00000300853 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
ERCC1-202ENST00000300853 PCF11O94913 1555 aaKnown RBP14.97□□□□□ -0.01
ERCC1-202ENST00000300853 RBM10P98175 930 aaKnown RBP14.96□□□□□ -0.01
ERCC1-202ENST00000300853 TPM2P07951 284 aa14.96□□□□□ -0.02
ERCC1-202ENST00000300853 ZNF644Q9H582 1327 aaPredicted RBP14.95□□□□□ -0.02
ERCC1-202ENST00000300853 PANK1Q8TE04 598 aa14.95□□□□□ -0.02
ERCC1-202ENST00000300853 PANK2Q9BZ23 570 aa14.95□□□□□ -0.02
ERCC1-202ENST00000300853 GRPEL1Q9HAV7 217 aa14.95□□□□□ -0.02
ERCC1-202ENST00000300853 PTPN23Q9H3S7 1636 aa14.94□□□□□ -0.02
ERCC1-202ENST00000300853 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
ERCC1-202ENST00000300853 PTMSP20962 102 aa14.94□□□□□ -0.02
ERCC1-202ENST00000300853 C8orf34Q49A92 452 aa14.94□□□□□ -0.02
ERCC1-202ENST00000300853 DDX49Q9Y6V7 483 aaKnown RBP14.94□□□□□ -0.02
ERCC1-202ENST00000300853 XRCC6P12956 609 aaKnown RBP eCLIP14.93□□□□□ -0.02
ERCC1-202ENST00000300853 MIA2Q96PC5 1412 aa14.93□□□□□ -0.02
ERCC1-202ENST00000300853 BCAR3O75815 825 aa14.93□□□□□ -0.02
ERCC1-202ENST00000300853 CLCN1P35523 988 aa14.92□□□□□ -0.02
ERCC1-202ENST00000300853 KIAA1211Q6ZU35 1233 aa14.92□□□□□ -0.02
ERCC1-202ENST00000300853 C22orf23Q9BZE7 217 aa14.92□□□□□ -0.02
ERCC1-202ENST00000300853 E9PSI1 815 aa14.92□□□□□ -0.02
ERCC1-202ENST00000300853 TDRD9Q8NDG6 1382 aaKnown RBP14.92□□□□□ -0.02
ERCC1-202ENST00000300853 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
ERCC1-202ENST00000300853 R3HCC1Q9Y3T6 440 aaKnown RBP14.92□□□□□ -0.02
ERCC1-202ENST00000300853 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
ERCC1-202ENST00000300853 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
ERCC1-202ENST00000300853 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.91□□□□□ -0.02
ERCC1-202ENST00000300853 PLCB2Q00722 1185 aa14.9□□□□□ -0.02
ERCC1-202ENST00000300853 SKOR2Q2VWA4 1001 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-202ENST00000300853 ANKRD30AQ9BXX3 1397 aa14.9□□□□□ -0.02
ERCC1-202ENST00000300853 PLEKHD1A6NEE1 506 aa14.89□□□□□ -0.03
ERCC1-202ENST00000300853 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
ERCC1-202ENST00000300853 CFAP53Q96M91 514 aa14.89□□□□□ -0.03
ERCC1-202ENST00000300853 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
ERCC1-202ENST00000300853 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
ERCC1-202ENST00000300853 AMER1Q5JTC6 1135 aaPredicted RBP14.88□□□□□ -0.03
ERCC1-202ENST00000300853 NASPP49321 788 aaPredicted RBP14.88□□□□□ -0.03
ERCC1-202ENST00000300853 DHX29Q7Z478 1369 aaKnown RBP14.87□□□□□ -0.03
ERCC1-202ENST00000300853 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
ERCC1-202ENST00000300853 PDZRN3Q9UPQ7 1066 aa14.86□□□□□ -0.03
ERCC1-202ENST00000300853 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
ERCC1-202ENST00000300853 CDK11BP21127 795 aaKnown RBP14.85□□□□□ -0.03
ERCC1-202ENST00000300853 RPRD2Q5VT52 1461 aaKnown RBP14.85□□□□□ -0.03
ERCC1-202ENST00000300853 PDCL3Q9H2J4 239 aa14.84□□□□□ -0.03
ERCC1-202ENST00000300853 MAP7D2Q96T17 732 aa14.84□□□□□ -0.03
ERCC1-202ENST00000300853 SMC4Q9NTJ3 1288 aa14.83□□□□□ -0.04
ERCC1-202ENST00000300853 ISY1Q9ULR0 285 aaKnown RBP14.83□□□□□ -0.04
ERCC1-202ENST00000300853 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
ERCC1-202ENST00000300853 MORC1Q86VD1 984 aa14.82□□□□□ -0.04
ERCC1-202ENST00000300853 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
ERCC1-202ENST00000300853 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
ERCC1-202ENST00000300853 PPP2R1AP30153 589 aa14.81□□□□□ -0.04
ERCC1-202ENST00000300853 PDE3AQ14432 1141 aa14.81□□□□□ -0.04
ERCC1-202ENST00000300853 DUSP27Q5VZP5 1158 aa14.81□□□□□ -0.04
ERCC1-202ENST00000300853 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
ERCC1-202ENST00000300853 CCDC173Q0VFZ6 552 aa14.81□□□□□ -0.04
ERCC1-202ENST00000300853 RAD54L2Q9Y4B4 1467 aa14.8□□□□□ -0.04
ERCC1-202ENST00000300853 EFCAB5A4FU69 1503 aa14.8□□□□□ -0.04
ERCC1-202ENST00000300853 IGHDP01880 384 aa14.8□□□□□ -0.04
ERCC1-202ENST00000300853 SEC24BO95487 1268 aa14.8□□□□□ -0.04
ERCC1-202ENST00000300853 CHAF1AQ13111 956 aaPredicted RBP14.79□□□□□ -0.04
ERCC1-202ENST00000300853 BIVM-ERCC5R4GMW8 1640 aa14.79□□□□□ -0.04
ERCC1-202ENST00000300853 KIAA1107Q9UPP5 1409 aa14.79□□□□□ -0.04
ERCC1-202ENST00000300853 SLFN5Q08AF3 891 aa14.79□□□□□ -0.04
ERCC1-202ENST00000300853 FOXD4L5Q5VV16 416 aaPredicted RBP14.78□□□□□ -0.04
ERCC1-202ENST00000300853 ZSCAN30Q86W11 494 aa14.78□□□□□ -0.04
ERCC1-202ENST00000300853 FOXD4L4Q8WXT5 416 aaPredicted RBP14.78□□□□□ -0.04
ERCC1-202ENST00000300853 EHBP1L1Q8N3D4 1523 aa14.78□□□□□ -0.04
ERCC1-202ENST00000300853 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
ERCC1-202ENST00000300853 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
ERCC1-202ENST00000300853 LRPPRCP42704 1394 aaKnown RBP14.77□□□□□ -0.04
ERCC1-202ENST00000300853 U2AF1L5P0DN76 240 aaPredicted RBP14.77□□□□□ -0.04
ERCC1-202ENST00000300853 U2AF1Q01081 240 aaKnown RBP eCLIP14.77□□□□□ -0.04
ERCC1-202ENST00000300853 ZKSCAN2Q63HK3 967 aa14.77□□□□□ -0.04
ERCC1-202ENST00000300853 KDM2BQ8NHM5 1336 aa14.77□□□□□ -0.04
ERCC1-202ENST00000300853 CCDC144AA2RUR9 1427 aa14.77□□□□□ -0.05
ERCC1-202ENST00000300853 CSPP1Q1MSJ5 1256 aa14.76□□□□□ -0.05
ERCC1-202ENST00000300853 MCTP1Q6DN14 999 aa14.76□□□□□ -0.05
ERCC1-202ENST00000300853 TBC1D32Q96NH3 1257 aa14.76□□□□□ -0.05
ERCC1-202ENST00000300853 SUPT6HQ7KZ85 1726 aaKnown RBP14.76□□□□□ -0.05
ERCC1-202ENST00000300853 UQCRHLA0A096LP55 91 aa14.75□□□□□ -0.05
ERCC1-202ENST00000300853 UQCRHP07919 91 aa14.75□□□□□ -0.05
ERCC1-202ENST00000300853 CAVIN1Q6NZI2 390 aaKnown RBP14.75□□□□□ -0.05
ERCC1-202ENST00000300853 LNPKQ9C0E8 428 aa14.75□□□□□ -0.05
ERCC1-202ENST00000300853 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
ERCC1-202ENST00000300853 HNRNPMP52272 730 aaKnown RBP eCLIP14.74□□□□□ -0.05
ERCC1-202ENST00000300853 MTERF4Q7Z6M4 381 aaKnown RBP14.74□□□□□ -0.05
ERCC1-202ENST00000300853 PRDM10Q9NQV6 1147 aa14.74□□□□□ -0.05
ERCC1-202ENST00000300853 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
ERCC1-202ENST00000300853 IPO8O15397 1037 aaKnown RBP14.74□□□□□ -0.05
ERCC1-202ENST00000300853 ANKRD50Q9ULJ7 1429 aa14.72□□□□□ -0.05
ERCC1-202ENST00000300853 ANKRD45Q5TZF3 282 aa14.72□□□□□ -0.05
ERCC1-202ENST00000300853 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
ERCC1-202ENST00000300853 APBB1O00213 710 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms