RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
IDH3A-201ENST00000299518 ARHGEF5Q12774 1597 aa15.27■□□□□ 0.04
IDH3A-201ENST00000299518 SHROOM2Q13796 1616 aa15.27■□□□□ 0.03
IDH3A-201ENST00000299518 RALGAPBQ86X10 1494 aa15.24■□□□□ 0.03
IDH3A-201ENST00000299518 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
IDH3A-201ENST00000299518 B4GALNT3Q6L9W6 998 aa15.24■□□□□ 0.03
IDH3A-201ENST00000299518 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
IDH3A-201ENST00000299518 CC2D1BQ5T0F9 858 aaKnown RBP15.23■□□□□ 0.03
IDH3A-201ENST00000299518 SENP3Q9H4L4 574 aaPredicted RBP15.23■□□□□ 0.03
IDH3A-201ENST00000299518 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
IDH3A-201ENST00000299518 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
IDH3A-201ENST00000299518 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
IDH3A-201ENST00000299518 RSPH4AQ5TD94 716 aa15.22■□□□□ 0.03
IDH3A-201ENST00000299518 POLR1AO95602 1720 aaPredicted RBP15.22■□□□□ 0.03
IDH3A-201ENST00000299518 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
IDH3A-201ENST00000299518 A2MP01023 1474 aa15.21■□□□□ 0.03
IDH3A-201ENST00000299518 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
IDH3A-201ENST00000299518 SPAG9O60271 1321 aaKnown RBP15.2■□□□□ 0.02
IDH3A-201ENST00000299518 PLCH2O75038 1416 aa15.2■□□□□ 0.02
IDH3A-201ENST00000299518 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
IDH3A-201ENST00000299518 DISP3Q9P2K9 1392 aa15.19■□□□□ 0.02
IDH3A-201ENST00000299518 PNISRQ8TF01 805 aaKnown RBP15.19■□□□□ 0.02
IDH3A-201ENST00000299518 RBM19Q9Y4C8 960 aaKnown RBP15.19■□□□□ 0.02
IDH3A-201ENST00000299518 KIF3BO15066 747 aa15.17■□□□□ 0.02
IDH3A-201ENST00000299518 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
IDH3A-201ENST00000299518 TESK2Q96S53 571 aa15.16■□□□□ 0.02
IDH3A-201ENST00000299518 PANK3Q9H999 370 aa15.15■□□□□ 0.02
IDH3A-201ENST00000299518 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
IDH3A-201ENST00000299518 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
IDH3A-201ENST00000299518 CFAP65Q6ZU64 1925 aaKnown RBP15.12■□□□□ 0.01
IDH3A-201ENST00000299518 UNC13BO14795 1591 aa15.12■□□□□ 0.01
IDH3A-201ENST00000299518 ABCC1P33527 1531 aa15.12■□□□□ 0.01
IDH3A-201ENST00000299518 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
IDH3A-201ENST00000299518 DUOX2Q9NRD8 1548 aa15.11■□□□□ 0.01
IDH3A-201ENST00000299518 UGGT1Q9NYU2 1555 aa15.1■□□□□ 0.01
IDH3A-201ENST00000299518 MAST1Q9Y2H9 1570 aa15.09■□□□□ 0.01
IDH3A-201ENST00000299518 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
IDH3A-201ENST00000299518 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
IDH3A-201ENST00000299518 FANCAO15360 1455 aa15.09■□□□□ 0.01
IDH3A-201ENST00000299518 CHGAP10645 457 aaKnown RBP15.08■□□□□ 0.01
IDH3A-201ENST00000299518 PLXNC1O60486 1568 aa15.08■□□□□ 0.01
IDH3A-201ENST00000299518 MYBBP1AQ9BQG0 1328 aaKnown RBP15.08■□□□□ 0.01
IDH3A-201ENST00000299518 NUTM2DQ5VT03 806 aaPredicted RBP15.08■□□□□ 0
IDH3A-201ENST00000299518 ARID4BQ4LE39 1312 aaPredicted RBP15.07■□□□□ 0
IDH3A-201ENST00000299518 E9PCH4 1651 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 NUDCQ9Y266 331 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 ERBINQ96RT1 1412 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 CFAP70Q5T0N1 1121 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 PPP4R2Q9NY27 417 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 GGT6Q6P531 493 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 WDR7Q9Y4E6 1490 aa15.06■□□□□ 0
IDH3A-201ENST00000299518 ATP10AO60312 1499 aa15.05■□□□□ -0
IDH3A-201ENST00000299518 ASXL2Q76L83 1435 aa15.05■□□□□ -0
IDH3A-201ENST00000299518 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
IDH3A-201ENST00000299518 UHRF1BP1LA0JNW5 1464 aa15.04■□□□□ -0
IDH3A-201ENST00000299518 KTN1Q86UP2 1357 aaKnown RBP15.04■□□□□ -0
IDH3A-201ENST00000299518 ADGRL1O94910 1474 aa15.03■□□□□ -0
IDH3A-201ENST00000299518 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
IDH3A-201ENST00000299518 TMF1P82094 1093 aa15.03■□□□□ -0
IDH3A-201ENST00000299518 RALBP1Q15311 655 aa15.02■□□□□ -0
IDH3A-201ENST00000299518 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
IDH3A-201ENST00000299518 RAPGEF3O95398 923 aa15.02□□□□□ -0.01
IDH3A-201ENST00000299518 MAGI2Q86UL8 1455 aa15.02□□□□□ -0.01
IDH3A-201ENST00000299518 MSH5O43196 834 aa15.02□□□□□ -0.01
IDH3A-201ENST00000299518 COL17A1Q9UMD9 1497 aaPredicted RBP15.01□□□□□ -0.01
IDH3A-201ENST00000299518 NLRP13Q86W25 1043 aa15.01□□□□□ -0.01
IDH3A-201ENST00000299518 PLIN1O60240 522 aa15.01□□□□□ -0.01
IDH3A-201ENST00000299518 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
IDH3A-201ENST00000299518 PRDM15P57071 1507 aaPredicted RBP15□□□□□ -0.01
IDH3A-201ENST00000299518 CLTCL1P53675 1640 aa15□□□□□ -0.01
IDH3A-201ENST00000299518 PARD3Q8TEW0 1356 aa15□□□□□ -0.01
IDH3A-201ENST00000299518 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
IDH3A-201ENST00000299518 BRD4O60885 1362 aaPredicted RBP14.99□□□□□ -0.01
IDH3A-201ENST00000299518 ATP7AQ04656 1500 aa14.99□□□□□ -0.01
IDH3A-201ENST00000299518 TMEM132EQ6IEE7 984 aa14.98□□□□□ -0.01
IDH3A-201ENST00000299518 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
IDH3A-201ENST00000299518 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
IDH3A-201ENST00000299518 ADAMTS8Q9UP79 889 aa14.97□□□□□ -0.01
IDH3A-201ENST00000299518 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
IDH3A-201ENST00000299518 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.02
IDH3A-201ENST00000299518 EXOC6Q8TAG9 804 aa14.95□□□□□ -0.02
IDH3A-201ENST00000299518 CCDC146Q8IYE0 955 aa14.95□□□□□ -0.02
IDH3A-201ENST00000299518 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
IDH3A-201ENST00000299518 TNNT2P45379 298 aaPredicted RBP14.94□□□□□ -0.02
IDH3A-201ENST00000299518 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
IDH3A-201ENST00000299518 MADDQ8WXG6 1647 aa14.94□□□□□ -0.02
IDH3A-201ENST00000299518 SPHKAPQ2M3C7 1700 aa14.94□□□□□ -0.02
IDH3A-201ENST00000299518 KANK1Q14678 1352 aa14.94□□□□□ -0.02
IDH3A-201ENST00000299518 RTEL1-TNFRSF6BF6WH68 1400 aa14.93□□□□□ -0.02
IDH3A-201ENST00000299518 ABCA9Q8IUA7 1624 aa14.93□□□□□ -0.02
IDH3A-201ENST00000299518 SAFB2Q14151 953 aaKnown RBP eCLIP14.92□□□□□ -0.02
IDH3A-201ENST00000299518 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
IDH3A-201ENST00000299518 TRPM2O94759 1503 aa14.92□□□□□ -0.02
IDH3A-201ENST00000299518 PTPRTO14522 1441 aa14.92□□□□□ -0.02
IDH3A-201ENST00000299518 PPP2R1AP30153 589 aa14.92□□□□□ -0.02
IDH3A-201ENST00000299518 RCAN3Q9UKA8 241 aa14.91□□□□□ -0.02
IDH3A-201ENST00000299518 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
IDH3A-201ENST00000299518 MROH1Q8NDA8 1641 aa14.91□□□□□ -0.02
IDH3A-201ENST00000299518 KIDINS220Q9ULH0 1771 aa14.9□□□□□ -0.02
IDH3A-201ENST00000299518 CARD14Q9BXL6 1004 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms