RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 GOLGA3Q08378 1498 aa12.41□□□□□ -0.42
TRIM44-201ENST00000299413 IPO8O15397 1037 aaKnown RBP12.41□□□□□ -0.42
TRIM44-201ENST00000299413 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
TRIM44-201ENST00000299413 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
TRIM44-201ENST00000299413 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
TRIM44-201ENST00000299413 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
TRIM44-201ENST00000299413 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.42
TRIM44-201ENST00000299413 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
TRIM44-201ENST00000299413 APPP05067 770 aa12.4□□□□□ -0.42
TRIM44-201ENST00000299413 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
TRIM44-201ENST00000299413 PKD2Q13563 968 aa12.4□□□□□ -0.43
TRIM44-201ENST00000299413 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
TRIM44-201ENST00000299413 RILPL2Q969X0 211 aa12.39□□□□□ -0.43
TRIM44-201ENST00000299413 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
TRIM44-201ENST00000299413 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
TRIM44-201ENST00000299413 H3BQV1 296 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
TRIM44-201ENST00000299413 NUTM2GQ5VZR2 741 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 CYB5RLQ6IPT4 315 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 PAF1Q8N7H5 531 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 WASHC2CQ9Y4E1 1318 aa12.38□□□□□ -0.43
TRIM44-201ENST00000299413 RBM33Q96EV2 1170 aaKnown RBP12.37□□□□□ -0.43
TRIM44-201ENST00000299413 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
TRIM44-201ENST00000299413 KIF3BO15066 747 aa12.37□□□□□ -0.43
TRIM44-201ENST00000299413 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
TRIM44-201ENST00000299413 PPP4R2Q9NY27 417 aa12.37□□□□□ -0.43
TRIM44-201ENST00000299413 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
TRIM44-201ENST00000299413 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
TRIM44-201ENST00000299413 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
TRIM44-201ENST00000299413 BCL11BQ9C0K0 894 aaPredicted RBP12.36□□□□□ -0.43
TRIM44-201ENST00000299413 ELL2O00472 640 aaPredicted RBP12.36□□□□□ -0.43
TRIM44-201ENST00000299413 TRAK1Q9UPV9 953 aa12.36□□□□□ -0.43
TRIM44-201ENST00000299413 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
TRIM44-201ENST00000299413 KIF16BQ96L93 1317 aa12.35□□□□□ -0.43
TRIM44-201ENST00000299413 TPM3P06753 285 aa12.35□□□□□ -0.43
TRIM44-201ENST00000299413 CALD1Q05682 793 aaKnown RBP12.35□□□□□ -0.43
TRIM44-201ENST00000299413 HTATSF1O43719 755 aaKnown RBP12.34□□□□□ -0.43
TRIM44-201ENST00000299413 AMOTL1Q8IY63 956 aa12.34□□□□□ -0.43
TRIM44-201ENST00000299413 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
TRIM44-201ENST00000299413 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
TRIM44-201ENST00000299413 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
TRIM44-201ENST00000299413 PSME1Q06323 249 aa12.33□□□□□ -0.44
TRIM44-201ENST00000299413 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
TRIM44-201ENST00000299413 PLIN1O60240 522 aa12.33□□□□□ -0.44
TRIM44-201ENST00000299413 SF3B2Q13435 895 aaKnown RBP12.33□□□□□ -0.44
TRIM44-201ENST00000299413 CCDC34Q96HJ3 373 aa12.33□□□□□ -0.44
TRIM44-201ENST00000299413 GBP4Q96PP9 640 aa12.33□□□□□ -0.44
TRIM44-201ENST00000299413 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.441e-7■■■■□ 26
TRIM44-201ENST00000299413 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
TRIM44-201ENST00000299413 IKQ13123 557 aaPredicted RBP12.31□□□□□ -0.44
TRIM44-201ENST00000299413 BCL2L13Q9BXK5 485 aa12.31□□□□□ -0.44
TRIM44-201ENST00000299413 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
TRIM44-201ENST00000299413 NFXL1Q6ZNB6 911 aa12.31□□□□□ -0.44
TRIM44-201ENST00000299413 TCERG1O14776 1098 aaKnown RBP12.31□□□□□ -0.44
TRIM44-201ENST00000299413 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
TRIM44-201ENST00000299413 HMMRO75330 724 aa12.3□□□□□ -0.44
TRIM44-201ENST00000299413 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
TRIM44-201ENST00000299413 DCAF1Q9Y4B6 1507 aa12.3□□□□□ -0.44
TRIM44-201ENST00000299413 CUX2O14529 1486 aa12.3□□□□□ -0.44
TRIM44-201ENST00000299413 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
TRIM44-201ENST00000299413 WRNQ14191 1432 aaPredicted RBP eCLIP12.29□□□□□ -0.44
TRIM44-201ENST00000299413 FAM184AQ8NB25 1140 aa12.29□□□□□ -0.44
TRIM44-201ENST00000299413 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
TRIM44-201ENST00000299413 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
TRIM44-201ENST00000299413 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
TRIM44-201ENST00000299413 TNNT3P45378 269 aaPredicted RBP12.29□□□□□ -0.44
TRIM44-201ENST00000299413 SYNE3Q6ZMZ3 975 aa12.28□□□□□ -0.44
TRIM44-201ENST00000299413 C9orf78Q9NZ63 289 aaPredicted RBP12.28□□□□□ -0.44
TRIM44-201ENST00000299413 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
TRIM44-201ENST00000299413 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
TRIM44-201ENST00000299413 NAP1L1P55209 391 aaKnown RBP12.27□□□□□ -0.44
TRIM44-201ENST00000299413 NUP155O75694 1391 aa12.27□□□□□ -0.44
TRIM44-201ENST00000299413 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.44
TRIM44-201ENST00000299413 SYAP1Q96A49 352 aaPredicted RBP12.27□□□□□ -0.44
TRIM44-201ENST00000299413 ATF3P18847 181 aa12.27□□□□□ -0.45
TRIM44-201ENST00000299413 ZFYVE27Q5T4F4 411 aa12.27□□□□□ -0.45
TRIM44-201ENST00000299413 TPM2P07951 284 aa12.27□□□□□ -0.45
TRIM44-201ENST00000299413 RCAN3Q9UKA8 241 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 AIMP1Q12904 312 aaKnown RBP12.26□□□□□ -0.45
TRIM44-201ENST00000299413 ARHGAP35Q9NRY4 1499 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 ANO2Q9NQ90 1003 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 CHMP4BP1P59074 171 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 COG3Q96JB2 828 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 ATP2B2Q01814 1243 aa12.26□□□□□ -0.45
TRIM44-201ENST00000299413 TEFQ10587 303 aa12.25□□□□□ -0.45
TRIM44-201ENST00000299413 STK11IPQ8N1F8 1099 aa12.25□□□□□ -0.45
TRIM44-201ENST00000299413 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
TRIM44-201ENST00000299413 ZNF592Q92610 1267 aa12.25□□□□□ -0.45
TRIM44-201ENST00000299413 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
TRIM44-201ENST00000299413 DEKP35659 375 aaKnown RBP12.24□□□□□ -0.45
TRIM44-201ENST00000299413 MYO15BQ96JP2 1530 aa12.24□□□□□ -0.45
TRIM44-201ENST00000299413 ODF2Q5BJF6 829 aa12.23□□□□□ -0.45
TRIM44-201ENST00000299413 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
TRIM44-201ENST00000299413 DIAPH3Q9NSV4 1193 aa12.23□□□□□ -0.45
TRIM44-201ENST00000299413 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
TRIM44-201ENST00000299413 CARMIL2Q6F5E8 1435 aa12.22□□□□□ -0.45
TRIM44-201ENST00000299413 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
TRIM44-201ENST00000299413 TRIM29Q14134 588 aa12.22□□□□□ -0.45
TRIM44-201ENST00000299413 EPS15P42566 896 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms