RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SMC4Q9NTJ3 1288 aa8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 TOMM22Q9NS69 142 aa8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 EVC2Q86UK5 1308 aa8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 B4GALNT3Q6L9W6 998 aa8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 VPS53Q5VIR6 699 aa8.7□□□□□ -1.02
GAPVD1-202ENST00000297933 TRIM6-TRIM34B2RNG4 842 aa8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 GLIPR1L2Q4G1C9 344 aa8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 RWDD1Q9H446 243 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 MINK1Q8N4C8 1332 aaPredicted RBP8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 TEFQ10587 303 aa8.69□□□□□ -1.02
GAPVD1-202ENST00000297933 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
GAPVD1-202ENST00000297933 NOL10Q9BSC4 688 aaKnown RBP8.68□□□□□ -1.02
GAPVD1-202ENST00000297933 CCDC146Q8IYE0 955 aa8.68□□□□□ -1.02
GAPVD1-202ENST00000297933 CTDP1Q9Y5B0 961 aaPredicted RBP8.68□□□□□ -1.02
GAPVD1-202ENST00000297933 MARCH6O60337 910 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 NGEFQ8N5V2 710 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 HTATSF1O43719 755 aaKnown RBP8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 CHAF1AQ13111 956 aaPredicted RBP8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 DRC7Q8IY82 874 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 RASSF8Q8NHQ8 419 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
GAPVD1-202ENST00000297933 L1TD1Q5T7N2 865 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 AMOTL1Q8IY63 956 aa8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 SF3B2Q13435 895 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 PRM3Q9NNZ6 103 aa8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
GAPVD1-202ENST00000297933 CGNL1Q0VF96 1302 aa8.65□□□□□ -1.02
GAPVD1-202ENST00000297933 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
GAPVD1-202ENST00000297933 CCER2I3L3R5 266 aa8.65□□□□□ -1.02
GAPVD1-202ENST00000297933 PMFBP1Q8TBY8 1022 aa8.65□□□□□ -1.02
GAPVD1-202ENST00000297933 NEXNQ0ZGT2 675 aa8.65□□□□□ -1.02
GAPVD1-202ENST00000297933 CCDC34Q96HJ3 373 aa8.65□□□□□ -1.03
GAPVD1-202ENST00000297933 RCAN3Q9UKA8 241 aa8.64□□□□□ -1.03
GAPVD1-202ENST00000297933 RAD21O60216 631 aa8.64□□□□□ -1.03
GAPVD1-202ENST00000297933 PRDM2Q13029 1718 aa8.64□□□□□ -1.03
GAPVD1-202ENST00000297933 EIF2S2P20042 333 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-202ENST00000297933 VPS37DQ86XT2 251 aa8.63□□□□□ -1.03
GAPVD1-202ENST00000297933 RAPGEF4Q8WZA2 1011 aa8.63□□□□□ -1.03
GAPVD1-202ENST00000297933 TCEAL9Q9UHQ7 104 aa8.62□□□□□ -1.03
GAPVD1-202ENST00000297933 CENPJQ9HC77 1338 aaPredicted RBP8.62□□□□□ -1.03
GAPVD1-202ENST00000297933 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
GAPVD1-202ENST00000297933 PROSER2Q86WR7 435 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 RRP7AQ9Y3A4 280 aaKnown RBP8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 CLUAP1Q96AJ1 413 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 PANK3Q9H999 370 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 FGD5Q6ZNL6 1462 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 WASHC2AQ641Q2 1341 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 TPM4P67936 248 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
GAPVD1-202ENST00000297933 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 DDX58O95786 925 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 C9orf78Q9NZ63 289 aaPredicted RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 AQRO60306 1485 aaKnown RBP eCLIP8.6□□□□□ -1.032e-6■■■■■ 28.9
GAPVD1-202ENST00000297933 PHLDB1Q86UU1 1377 aa8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 ELL2O00472 640 aaPredicted RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 LRRFIP1Q32MZ4 808 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 NLRP13Q86W25 1043 aa8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 RAD54L2Q9Y4B4 1467 aa8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
GAPVD1-202ENST00000297933 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 KIF15Q9NS87 1388 aa8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 ST20-MTHFSA0A0A6YYL1 179 aa8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 DIAPH1O60610 1272 aaKnown RBP8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 ESCO1Q5FWF5 840 aa8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 NUTM2GQ5VZR2 741 aa8.59□□□□□ -1.03
GAPVD1-202ENST00000297933 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.04
GAPVD1-202ENST00000297933 TXNDC2Q86VQ3 553 aa8.59□□□□□ -1.04
GAPVD1-202ENST00000297933 NOC3LQ8WTT2 800 aaKnown RBP8.59□□□□□ -1.04
GAPVD1-202ENST00000297933 PPP1R1BQ9UD71 204 aaPredicted RBP8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 CREBRFQ8IUR6 639 aa8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 NECTIN2Q92692 538 aa8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 KIF3AQ9Y496 699 aa8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 ARHGAP5Q13017 1502 aa8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 PIP4K2BP78356 416 aa8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 NOL8Q76FK4 1167 aaKnown RBP8.58□□□□□ -1.04
GAPVD1-202ENST00000297933 USP35Q9P2H5 1018 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 PTMSP20962 102 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 RILPL2Q969X0 211 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 KIF16BQ96L93 1317 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 NOP58Q9Y2X3 529 aaKnown RBP8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 PDE4CQ08493 712 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 CSPP1Q1MSJ5 1256 aa8.57□□□□□ -1.04
GAPVD1-202ENST00000297933 DHX16O60231 1041 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 THEMISQ8N1K5 641 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 STRN4Q9NRL3 753 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 CEP89Q96ST8 783 aa8.56□□□□□ -1.04
GAPVD1-202ENST00000297933 MYBBP1AQ9BQG0 1328 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms