RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 SKOR2Q2VWA4 1001 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-201ENST00000297268 GGT6Q6P531 493 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 E9PSI1 815 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-201ENST00000297268 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
COL1A2-201ENST00000297268 COG6Q9Y2V7 657 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 HMMRO75330 724 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
COL1A2-201ENST00000297268 GNL2Q13823 731 aaKnown RBP17.68■□□□□ 0.42
COL1A2-201ENST00000297268 HNRNPMP52272 730 aaKnown RBP eCLIP17.68■□□□□ 0.42
COL1A2-201ENST00000297268 PHF14O94880 888 aa17.67■□□□□ 0.42
COL1A2-201ENST00000297268 SMARCA4P51532 1647 aa17.67■□□□□ 0.42
COL1A2-201ENST00000297268 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
COL1A2-201ENST00000297268 CARMIL2Q6F5E8 1435 aa17.66■□□□□ 0.42
COL1A2-201ENST00000297268 CSPP1Q1MSJ5 1256 aa17.66■□□□□ 0.42
COL1A2-201ENST00000297268 NFKBIBQ15653 356 aa17.65■□□□□ 0.42
COL1A2-201ENST00000297268 STK31Q9BXU1 1019 aa17.64■□□□□ 0.41
COL1A2-201ENST00000297268 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
COL1A2-201ENST00000297268 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
COL1A2-201ENST00000297268 ANKRD45Q5TZF3 282 aa17.63■□□□□ 0.41
COL1A2-201ENST00000297268 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
COL1A2-201ENST00000297268 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
COL1A2-201ENST00000297268 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
COL1A2-201ENST00000297268 TPM4P67936 248 aa17.62■□□□□ 0.41
COL1A2-201ENST00000297268 APAF1O14727 1248 aa17.61■□□□□ 0.41
COL1A2-201ENST00000297268 TNNT3P45378 269 aaPredicted RBP17.61■□□□□ 0.41
COL1A2-201ENST00000297268 KIF7Q2M1P5 1343 aa17.61■□□□□ 0.41
COL1A2-201ENST00000297268 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
COL1A2-201ENST00000297268 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
COL1A2-201ENST00000297268 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
COL1A2-201ENST00000297268 EFCAB2Q5VUJ9 269 aa17.6■□□□□ 0.41
COL1A2-201ENST00000297268 SPAG9O60271 1321 aaKnown RBP17.6■□□□□ 0.41
COL1A2-201ENST00000297268 CADPSQ9ULU8 1353 aa17.6■□□□□ 0.41
COL1A2-201ENST00000297268 PDS5BQ9NTI5 1447 aa17.59■□□□□ 0.41
COL1A2-201ENST00000297268 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.41
COL1A2-201ENST00000297268 GPATCH3Q96I76 525 aa17.58■□□□□ 0.4
COL1A2-201ENST00000297268 LMOD3Q0VAK6 560 aa17.58■□□□□ 0.4
COL1A2-201ENST00000297268 KIF3BO15066 747 aa17.57■□□□□ 0.4
COL1A2-201ENST00000297268 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
COL1A2-201ENST00000297268 MLECQ14165 292 aa17.56■□□□□ 0.4
COL1A2-201ENST00000297268 WASHC2AQ641Q2 1341 aa17.56■□□□□ 0.4
COL1A2-201ENST00000297268 RSPH4AQ5TD94 716 aa17.56■□□□□ 0.4
COL1A2-201ENST00000297268 FOXD4L6Q3SYB3 417 aaPredicted RBP17.55■□□□□ 0.4
COL1A2-201ENST00000297268 FOXD4L3Q6VB84 417 aaPredicted RBP17.55■□□□□ 0.4
COL1A2-201ENST00000297268 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
COL1A2-201ENST00000297268 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
COL1A2-201ENST00000297268 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
COL1A2-201ENST00000297268 PAK3O75914 559 aaPredicted RBP17.53■□□□□ 0.4
COL1A2-201ENST00000297268 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
COL1A2-201ENST00000297268 FAM13BQ9NYF5 915 aa17.53■□□□□ 0.4
COL1A2-201ENST00000297268 KIF21BO75037 1637 aa17.53■□□□□ 0.4
COL1A2-201ENST00000297268 UACAQ9BZF9 1416 aa17.53■□□□□ 0.4
COL1A2-201ENST00000297268 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
COL1A2-201ENST00000297268 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
COL1A2-201ENST00000297268 RILPL2Q969X0 211 aa17.52■□□□□ 0.4
COL1A2-201ENST00000297268 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
COL1A2-201ENST00000297268 BRPF3Q9ULD4 1205 aa17.51■□□□□ 0.39
COL1A2-201ENST00000297268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL1A2-201ENST00000297268 DZIP1LQ8IYY4 767 aaKnown RBP17.51■□□□□ 0.39
COL1A2-201ENST00000297268 NPHP1O15259 732 aa17.5■□□□□ 0.39
COL1A2-201ENST00000297268 IL27Q8NEV9 243 aa17.5■□□□□ 0.39
COL1A2-201ENST00000297268 ATP6V1DQ9Y5K8 247 aa17.5■□□□□ 0.39
COL1A2-201ENST00000297268 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.49■□□□□ 0.39
COL1A2-201ENST00000297268 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
COL1A2-201ENST00000297268 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
COL1A2-201ENST00000297268 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
COL1A2-201ENST00000297268 HDAC5Q9UQL6 1122 aa17.49■□□□□ 0.39
COL1A2-201ENST00000297268 GOLGA6L1Q8N7Z2 621 aa17.49■□□□□ 0.39
COL1A2-201ENST00000297268 MRE11P49959 708 aa17.46■□□□□ 0.39
COL1A2-201ENST00000297268 REC8O95072 547 aa17.46■□□□□ 0.39
COL1A2-201ENST00000297268 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
COL1A2-201ENST00000297268 BRD4O60885 1362 aaPredicted RBP17.46■□□□□ 0.39
COL1A2-201ENST00000297268 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
COL1A2-201ENST00000297268 GOLGA6L19H0YKK7 550 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 PANK1Q8TE04 598 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 GORABQ5T7V8 394 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 SF3A1Q15459 793 aaKnown RBP17.45■□□□□ 0.38
COL1A2-201ENST00000297268 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
COL1A2-201ENST00000297268 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
COL1A2-201ENST00000297268 H3BQV1 296 aa17.44■□□□□ 0.38
COL1A2-201ENST00000297268 IFFO2Q5TF58 517 aa17.44■□□□□ 0.38
COL1A2-201ENST00000297268 MCTP1Q6DN14 999 aa17.43■□□□□ 0.38
COL1A2-201ENST00000297268 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
COL1A2-201ENST00000297268 AKNAQ7Z591 1439 aa17.43■□□□□ 0.38
COL1A2-201ENST00000297268 NUCB2P80303 420 aa17.43■□□□□ 0.38
COL1A2-201ENST00000297268 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
COL1A2-201ENST00000297268 BECN2A8MW95 431 aa17.42■□□□□ 0.38
COL1A2-201ENST00000297268 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
COL1A2-201ENST00000297268 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
COL1A2-201ENST00000297268 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
COL1A2-201ENST00000297268 NOC3LQ8WTT2 800 aaKnown RBP17.42■□□□□ 0.38
COL1A2-201ENST00000297268 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
COL1A2-201ENST00000297268 ZNF330Q9Y3S2 320 aaPredicted RBP17.41■□□□□ 0.38
COL1A2-201ENST00000297268 TRAK2O60296 914 aa17.41■□□□□ 0.38
COL1A2-201ENST00000297268 AAMPQ13685 434 aa17.4■□□□□ 0.38
COL1A2-201ENST00000297268 ADAMTS8Q9UP79 889 aa17.4■□□□□ 0.38
COL1A2-201ENST00000297268 BACH2Q9BYV9 841 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms