RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 ATP10AO60312 1499 aa19.24■□□□□ 0.67
CHMP4C-201ENST00000297265 ZNF518AQ6AHZ1 1483 aa19.24■□□□□ 0.67
CHMP4C-201ENST00000297265 UHRF1BP1Q6BDS2 1440 aa19.24■□□□□ 0.67
CHMP4C-201ENST00000297265 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
CHMP4C-201ENST00000297265 CFAP74Q9C0B2 1584 aa19.24■□□□□ 0.67
CHMP4C-201ENST00000297265 KDM5CP41229 1560 aa19.23■□□□□ 0.67
CHMP4C-201ENST00000297265 DHX29Q7Z478 1369 aaKnown RBP19.23■□□□□ 0.67
CHMP4C-201ENST00000297265 VWDEQ8N2E2 1590 aa19.22■□□□□ 0.67
CHMP4C-201ENST00000297265 POGZQ7Z3K3 1410 aa19.21■□□□□ 0.67
CHMP4C-201ENST00000297265 MAP3K4Q9Y6R4 1608 aa19.2■□□□□ 0.66
CHMP4C-201ENST00000297265 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
CHMP4C-201ENST00000297265 WASHC2AQ641Q2 1341 aa19.2■□□□□ 0.66
CHMP4C-201ENST00000297265 E9PCH4 1651 aa19.2■□□□□ 0.66
CHMP4C-201ENST00000297265 NEO1Q92859 1461 aa19.19■□□□□ 0.66
CHMP4C-201ENST00000297265 MROH1Q8NDA8 1641 aa19.19■□□□□ 0.66
CHMP4C-201ENST00000297265 EIF2AK4Q9P2K8 1649 aaKnown RBP19.19■□□□□ 0.66
CHMP4C-201ENST00000297265 C11orf95C9JLR9 678 aaPredicted RBP19.19■□□□□ 0.66
CHMP4C-201ENST00000297265 MLH3Q9UHC1 1453 aa19.19■□□□□ 0.66
CHMP4C-201ENST00000297265 GLI2P10070 1586 aa19.18■□□□□ 0.66
CHMP4C-201ENST00000297265 KIF3BO15066 747 aa19.16■□□□□ 0.66
CHMP4C-201ENST00000297265 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
CHMP4C-201ENST00000297265 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
CHMP4C-201ENST00000297265 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 FRMPD1Q5SYB0 1578 aa19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 TET3O43151 1660 aa19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
CHMP4C-201ENST00000297265 PTPRTO14522 1441 aa19.13■□□□□ 0.65
CHMP4C-201ENST00000297265 HECW2Q9P2P5 1572 aa19.13■□□□□ 0.65
CHMP4C-201ENST00000297265 KDM2AQ9Y2K7 1162 aa19.13■□□□□ 0.65
CHMP4C-201ENST00000297265 A2MP01023 1474 aa19.13■□□□□ 0.65
CHMP4C-201ENST00000297265 RAPGEF3O95398 923 aa19.12■□□□□ 0.65
CHMP4C-201ENST00000297265 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
CHMP4C-201ENST00000297265 ABCA6Q8N139 1617 aa19.1■□□□□ 0.65
CHMP4C-201ENST00000297265 RICTORQ6R327 1708 aa19.1■□□□□ 0.65
CHMP4C-201ENST00000297265 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 PRAG1Q86YV5 1406 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 TRPM2O94759 1503 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 SPHKAPQ2M3C7 1700 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 USP47Q96K76 1375 aa19.09■□□□□ 0.65
CHMP4C-201ENST00000297265 CENPBP07199 599 aaPredicted RBP19.08■□□□□ 0.65
CHMP4C-201ENST00000297265 KANK1Q14678 1352 aa19.08■□□□□ 0.64
CHMP4C-201ENST00000297265 POLR1AO95602 1720 aaPredicted RBP19.08■□□□□ 0.64
CHMP4C-201ENST00000297265 BCORL1Q5H9F3 1711 aa19.07■□□□□ 0.64
CHMP4C-201ENST00000297265 TRPM1Q7Z4N2 1603 aa19.06■□□□□ 0.64
CHMP4C-201ENST00000297265 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
CHMP4C-201ENST00000297265 LMTK2Q8IWU2 1503 aa19.06■□□□□ 0.64
CHMP4C-201ENST00000297265 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
CHMP4C-201ENST00000297265 CLTCL1P53675 1640 aa19.05■□□□□ 0.64
CHMP4C-201ENST00000297265 PPRC1Q5VV67 1664 aaKnown RBP19.04■□□□□ 0.64
CHMP4C-201ENST00000297265 DIP2CQ9Y2E4 1556 aa19.04■□□□□ 0.64
CHMP4C-201ENST00000297265 EFCAB6Q5THR3 1501 aa19.03■□□□□ 0.64
CHMP4C-201ENST00000297265 CEP152O94986 1710 aa19.03■□□□□ 0.64
CHMP4C-201ENST00000297265 CARD11Q9BXL7 1154 aa19.03■□□□□ 0.64
CHMP4C-201ENST00000297265 ANP32CO43423 234 aa19.01■□□□□ 0.63
CHMP4C-201ENST00000297265 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
CHMP4C-201ENST00000297265 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
CHMP4C-201ENST00000297265 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
CHMP4C-201ENST00000297265 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
CHMP4C-201ENST00000297265 YEATS2Q9ULM3 1422 aa18.99■□□□□ 0.63
CHMP4C-201ENST00000297265 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
CHMP4C-201ENST00000297265 ROCK2O75116 1388 aaKnown RBP18.99■□□□□ 0.63
CHMP4C-201ENST00000297265 NEURL4Q96JN8 1562 aa18.97■□□□□ 0.63
CHMP4C-201ENST00000297265 UGGT1Q9NYU2 1555 aa18.97■□□□□ 0.63
CHMP4C-201ENST00000297265 TSPOAP1O95153 1857 aa18.97■□□□□ 0.63
CHMP4C-201ENST00000297265 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
CHMP4C-201ENST00000297265 GGT6Q6P531 493 aa18.97■□□□□ 0.63
CHMP4C-201ENST00000297265 NPATQ14207 1427 aa18.95■□□□□ 0.62
CHMP4C-201ENST00000297265 LAMC1P11047 1609 aa18.95■□□□□ 0.62
CHMP4C-201ENST00000297265 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
CHMP4C-201ENST00000297265 ABCC3O15438 1527 aa18.94■□□□□ 0.62
CHMP4C-201ENST00000297265 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
CHMP4C-201ENST00000297265 ARID4BQ4LE39 1312 aaPredicted RBP18.94■□□□□ 0.62
CHMP4C-201ENST00000297265 MADDQ8WXG6 1647 aa18.94■□□□□ 0.62
CHMP4C-201ENST00000297265 STAC3Q96MF2 364 aa18.9■□□□□ 0.62
CHMP4C-201ENST00000297265 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
CHMP4C-201ENST00000297265 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
CHMP4C-201ENST00000297265 KIF1BO60333 1816 aa18.89■□□□□ 0.62
CHMP4C-201ENST00000297265 SIGLEC1Q9BZZ2 1709 aa18.89■□□□□ 0.62
CHMP4C-201ENST00000297265 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
CHMP4C-201ENST00000297265 MROH2AA6NES4 1674 aa18.88■□□□□ 0.61
CHMP4C-201ENST00000297265 COL17A1Q9UMD9 1497 aaPredicted RBP18.87■□□□□ 0.61
CHMP4C-201ENST00000297265 TESK2Q96S53 571 aa18.87■□□□□ 0.61
CHMP4C-201ENST00000297265 PRKRIP1Q9H875 184 aaPredicted RBP18.87■□□□□ 0.61
CHMP4C-201ENST00000297265 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
CHMP4C-201ENST00000297265 NOS1P29475 1434 aa18.86■□□□□ 0.61
CHMP4C-201ENST00000297265 ADGRB3O60242 1522 aa18.85■□□□□ 0.61
CHMP4C-201ENST00000297265 ARHGAP31Q2M1Z3 1444 aa18.84■□□□□ 0.61
CHMP4C-201ENST00000297265 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
CHMP4C-201ENST00000297265 MYOM2P54296 1465 aa18.83■□□□□ 0.61
CHMP4C-201ENST00000297265 ZC3H13Q5T200 1668 aaKnown RBP18.83■□□□□ 0.61
CHMP4C-201ENST00000297265 REREQ9P2R6 1566 aa18.82■□□□□ 0.6
CHMP4C-201ENST00000297265 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
CHMP4C-201ENST00000297265 ADGRF5Q8IZF2 1346 aa18.82■□□□□ 0.6
CHMP4C-201ENST00000297265 KIAA1210Q9ULL0 1709 aa18.82■□□□□ 0.6
CHMP4C-201ENST00000297265 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
CHMP4C-201ENST00000297265 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms